| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is CsoS3
Identifier: 146339301
GI number: 146339301
Start: 2426906
End: 2428438
Strand: Direct
Name: CsoS3
Synonym: BRADO2277
Alternate gene names: NA
Gene position: 2426906-2428438 (Clockwise)
Preceding gene: 146339300
Following gene: 146339302
Centisome position: 32.55
GC content: 69.41
Gene sequence:
>1533_bases TTGAGAGGGCCAGCCTTATACGCAGCGCGCCGCGCCTCGGTCGGTCCGCACCATCGGCTCCGCATTCAGCCGCGTGGCTG GGACGGTCTGTCGCTGGCAGATGATGCGCCGATCGCCCGCTATCACCCGCTCGCCGACCGAGCGATCAGCCAGGCACTCC GGCGGAGAGCCGACGAGATCGAGGCTGCGTTCGGCGAGATCGCGCCGACCTTGCAGGAGCTGGCTCCGCGCCAGTTCGCG CCGGAGTTCGCGCAGGTCGCCGCCGAGACCATGCGCGCTCGTCTGAAGCTCGAGATTCCGCACGCGGCCCTGACGGCGAG CTGGACCGCGCCGCTGGACATGCGCGCGCTGCATGCGCGATGCGTGCTCGGTACGTTCTGCCGGCTGATCGAGCGCGCGT TCGACCGCGGCCTGGCGAATCTCTCCGACGGCGAGCCAGCTGATGCGCTGATCTGTCGCTGGGGTTTTCATGCGGTCGAC ATCACACCCTGTGCCGATGGCCGGCTGAGCGGTGTGACGGACTATATTCTGCGGGTGCCTTCCAGCATCGTCGCATTCCG CGAGTCGTACGCCGGCGCGATGTTCGACGTCGACAACGCCGTCCGGCACTGGGAGAGCGTCGAGCTGCGGCGTTGGCGCG ATGCCTGGCCGAATGCCGCGGACGCACCGACGCGTTATCTCAAGATCGGCGTCTATCATTACAGCAGCGTGGCTCCGCAG CACGAGGGCTGCGCCGCCCATGGCAGCGACGAGACGCGCGCCGCCTCCGCGCTGCTGGAGCGGCTGAACGCCTTCGAGCA GGCCGTGCGCGCCTTGCACGGCGCGCCTGCGTCTGTCGCGACGTTGCTGGTCGGCGTCGACACGGATACGGACGCGATCC GCGTGCACGTGCCCGATGCGTCGGGCCGCATGGACATTCGCCGCCACGTCGACAGCGGGAGCCTGTACGACGCCACGTCG CGTCTGCCGCGCGAGAGCGCCAAGGAGGCCATTCGCGACGCCGTGGCGGCCTGCGCCGGCGCGTCCGCCGACGATCTCGA GACCGAGGGCATGCGCTGGTTCTGCGGCTATCTTCTGAAGAACAATATCGGTCAGGTCGAGGCGGTGCGGGACTGGCATC AGGGGCGCTACGCCGATGCCGGACACACCGAGCGGCTGATCGTGGTCGGCGATCCCGTCGACGACGTGCAACTGCGCAAT CTGGCGTTCCAGGCGCAGATGCGCACCGTCGAGGAGGGCGCGGACGATCTCGACGTCGGCATCCGCATTCTGCGCGCCCA TCACGCACCGCACCGGCTGCCGGTGCCGGTGCTGGTTCATATCAGGTTCGACCCGCGCATTCCAGGCGCCTTTGCCGCCG CCGGGCAGCACGCGCGTCGGCTCGCAGCCGCGATCACGGCGCGTCACGGCGTGCTGGCCGCACAGGGCGAGCTCGTTGTT GCCGCCGTGGTTCGCGCCGCGGATGGCAGCGTGCTCACACCGATCGATCTCACGGCGTCGCAGGACGACGCGCCACCGGA GGCTCACCGATGA
Upstream 100 bases:
>100_bases AGAAGGCGACGCGCGAGGAGGCCAGGCAGCTCGTGACCGGGATGTTCGGCTACTTCTCGAAGACGGGTGCCCGTGTCACG CTATCCGGTGGAGCACAAAG
Downstream 100 bases:
>100_bases AGATCTGCCAAGTCGAAGGCACGCTCGTGGCGACTGCCCGCATTCCCGGGCTCTTGAATCGCCGGCTGCTCGTGGTCAAG GAGCGCGGCAGCAGCGCCAA
Product: carboxysome structural peptide
Products: NA
Alternate protein names: Carboxysome Shell; Carboxysome Peptide; Carboxysome Shell Carbonic Anhydrase Epsilon
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MRGPALYAARRASVGPHHRLRIQPRGWDGLSLADDAPIARYHPLADRAISQALRRRADEIEAAFGEIAPTLQELAPRQFA PEFAQVAAETMRARLKLEIPHAALTASWTAPLDMRALHARCVLGTFCRLIERAFDRGLANLSDGEPADALICRWGFHAVD ITPCADGRLSGVTDYILRVPSSIVAFRESYAGAMFDVDNAVRHWESVELRRWRDAWPNAADAPTRYLKIGVYHYSSVAPQ HEGCAAHGSDETRAASALLERLNAFEQAVRALHGAPASVATLLVGVDTDTDAIRVHVPDASGRMDIRRHVDSGSLYDATS RLPRESAKEAIRDAVAACAGASADDLETEGMRWFCGYLLKNNIGQVEAVRDWHQGRYADAGHTERLIVVGDPVDDVQLRN LAFQAQMRTVEEGADDLDVGIRILRAHHAPHRLPVPVLVHIRFDPRIPGAFAAAGQHARRLAAAITARHGVLAAQGELVV AAVVRAADGSVLTPIDLTASQDDAPPEAHR
Sequences:
>Translated_510_residues MRGPALYAARRASVGPHHRLRIQPRGWDGLSLADDAPIARYHPLADRAISQALRRRADEIEAAFGEIAPTLQELAPRQFA PEFAQVAAETMRARLKLEIPHAALTASWTAPLDMRALHARCVLGTFCRLIERAFDRGLANLSDGEPADALICRWGFHAVD ITPCADGRLSGVTDYILRVPSSIVAFRESYAGAMFDVDNAVRHWESVELRRWRDAWPNAADAPTRYLKIGVYHYSSVAPQ HEGCAAHGSDETRAASALLERLNAFEQAVRALHGAPASVATLLVGVDTDTDAIRVHVPDASGRMDIRRHVDSGSLYDATS RLPRESAKEAIRDAVAACAGASADDLETEGMRWFCGYLLKNNIGQVEAVRDWHQGRYADAGHTERLIVVGDPVDDVQLRN LAFQAQMRTVEEGADDLDVGIRILRAHHAPHRLPVPVLVHIRFDPRIPGAFAAAGQHARRLAAAITARHGVLAAQGELVV AAVVRAADGSVLTPIDLTASQDDAPPEAHR >Mature_510_residues MRGPALYAARRASVGPHHRLRIQPRGWDGLSLADDAPIARYHPLADRAISQALRRRADEIEAAFGEIAPTLQELAPRQFA PEFAQVAAETMRARLKLEIPHAALTASWTAPLDMRALHARCVLGTFCRLIERAFDRGLANLSDGEPADALICRWGFHAVD ITPCADGRLSGVTDYILRVPSSIVAFRESYAGAMFDVDNAVRHWESVELRRWRDAWPNAADAPTRYLKIGVYHYSSVAPQ HEGCAAHGSDETRAASALLERLNAFEQAVRALHGAPASVATLLVGVDTDTDAIRVHVPDASGRMDIRRHVDSGSLYDATS RLPRESAKEAIRDAVAACAGASADDLETEGMRWFCGYLLKNNIGQVEAVRDWHQGRYADAGHTERLIVVGDPVDDVQLRN LAFQAQMRTVEEGADDLDVGIRILRAHHAPHRLPVPVLVHIRFDPRIPGAFAAAGQHARRLAAAITARHGVLAAQGELVV AAVVRAADGSVLTPIDLTASQDDAPPEAHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55553; Mature: 55553
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGPALYAARRASVGPHHRLRIQPRGWDGLSLADDAPIARYHPLADRAISQALRRRADEI CCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHH EAAFGEIAPTLQELAPRQFAPEFAQVAAETMRARLKLEIPHAALTASWTAPLDMRALHAR HHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHEEEECCCHHEEECCCCCCHHHHHHHH CVLGTFCRLIERAFDRGLANLSDGEPADALICRWGFHAVDITPCADGRLSGVTDYILRVP HHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEECCCEEEEEECCCCCCCCHHHHHHHHHH SSIVAFRESYAGAMFDVDNAVRHWESVELRRWRDAWPNAADAPTRYLKIGVYHYSSVAPQ HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCC HEGCAAHGSDETRAASALLERLNAFEQAVRALHGAPASVATLLVGVDTDTDAIRVHVPDA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCEEEEEECCC SGRMDIRRHVDSGSLYDATSRLPRESAKEAIRDAVAACAGASADDLETEGMRWFCGYLLK CCCCHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH NNIGQVEAVRDWHQGRYADAGHTERLIVVGDPVDDVQLRNLAFQAQMRTVEEGADDLDVG CCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH IRILRAHHAPHRLPVPVLVHIRFDPRIPGAFAAAGQHARRLAAAITARHGVLAAQGELVV HHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCHH AAVVRAADGSVLTPIDLTASQDDAPPEAHR HHHHHHCCCCEECCEECCCCCCCCCCCCCC >Mature Secondary Structure MRGPALYAARRASVGPHHRLRIQPRGWDGLSLADDAPIARYHPLADRAISQALRRRADEI CCCCHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHH EAAFGEIAPTLQELAPRQFAPEFAQVAAETMRARLKLEIPHAALTASWTAPLDMRALHAR HHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHEEEECCCHHEEECCCCCCHHHHHHHH CVLGTFCRLIERAFDRGLANLSDGEPADALICRWGFHAVDITPCADGRLSGVTDYILRVP HHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEECCCEEEEEECCCCCCCCHHHHHHHHHH SSIVAFRESYAGAMFDVDNAVRHWESVELRRWRDAWPNAADAPTRYLKIGVYHYSSVAPQ HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCC HEGCAAHGSDETRAASALLERLNAFEQAVRALHGAPASVATLLVGVDTDTDAIRVHVPDA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCEEEEEECCC SGRMDIRRHVDSGSLYDATSRLPRESAKEAIRDAVAACAGASADDLETEGMRWFCGYLLK CCCCHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH NNIGQVEAVRDWHQGRYADAGHTERLIVVGDPVDDVQLRNLAFQAQMRTVEEGADDLDVG CCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHH IRILRAHHAPHRLPVPVLVHIRFDPRIPGAFAAAGQHARRLAAAITARHGVLAAQGELVV HHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCHH AAVVRAADGSVLTPIDLTASQDDAPPEAHR HHHHHHCCCCEECCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA