| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339273
Identifier: 146339273
GI number: 146339273
Start: 2397054
End: 2398055
Strand: Direct
Name: 146339273
Synonym: BRADO2248
Alternate gene names: NA
Gene position: 2397054-2398055 (Clockwise)
Preceding gene: 146339272
Following gene: 146339274
Centisome position: 32.15
GC content: 62.48
Gene sequence:
>1002_bases GTGATGATGAGAAAGATCAAAATGCCGATGCGGCTTCCCGCAACGCTGATGTCAACGCTCCTGCTGGCGCTCGCGTGGCC GGTCGAGGCTCAGGTGCTGCCGCCGAACGTGCCATCCAAGGAGCAGCTCGCGAACGACAATCATTTGTTCCTTTCGCTGG CCAGGAAGATCTTCAAGTGGGAGGAGCCCGCCGAGCCGGTGCGGATCGTAGGACCGATCTATTTCGTGGGGACCAGAGGC CTCGGCGCATTCCTCATCGTGACGTCGGAGGGACACATCCTGATGAACACGGGGATGCCGTCGTCCGGACCGATGATCGT GGAGTCGATTCGCAAGCTTGGCTTCAAGCCGGATGACGTCAAGTTGATGATCAACGGCCACGCGCATATCGATCATGCGG GTGCGTTCGCCTTCATGAAAAGGCTGACGGGGGCGCAGCTGGCCATCATGAAGGACGATGTCGCGGCGATCGAGAGCGGC GACAGGGGCGATTTCAAGTATGCGGACGACCTGGCCTATGAAGGCGTGACGGTCGACCGGGTGCTGCGCGACGGCGACCA GATCAGGATGGGTGATGTCCTGCTCACCGCCTACCACACGCCGGGCCACACGCGGGGAGCGACCACATGGATCGCCAACC TCGTCGTGGATGGCAAGGCCTATCTGGTGGCATTCCCGGACGGCGCCGGCGTCAACCCCGGCTACCGCCTGGCGAAGGAC CCGTCGTATCCCGGCATCGAGGGCGACTACCGCAAGACCCACCACGCTCTCGAGATGATCAAGCCGGACATCTGGCTGGC GCAGCACAACGAATACTACGATTTCGAAGGTAAGCGGAAGCGTGCGGAGACGCAGGGCGTCAGCGCCTGGATCGATCCGG AAGGCTATCGCCGCTTCATTGCCGGCAAGAAGCGCGCGTTCGAGGACGAGGTCGACGAGGAGCTTGGGGCTCCCAAAGCC GCCGCGACATCGTCGGCCGACGCGCCTAGCAACAACAGATAG
Upstream 100 bases:
>100_bases TGAATCCTTCGTGTTCCTGCTCGAAGAGCTGAGCCGTCCGCAAGACGCCAATCGAGCAAGTTAGCGGCGACAAGACCTGC CGGTTTAAGGGTGATTTTCT
Downstream 100 bases:
>100_bases CGCGTGGTCGGACAAAGGTCGCCGCGAATGCGGAGGTGGACTCATTGAACGGTCGCATCGGCGCGAGAACGGCTCATCCC GAGCAATTTCGTTCAACGCG
Product: putative beta-lactamase
Products: NA
Alternate protein names: Beta-lactamase type II; Penicillinase [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MMMRKIKMPMRLPATLMSTLLLALAWPVEAQVLPPNVPSKEQLANDNHLFLSLARKIFKWEEPAEPVRIVGPIYFVGTRG LGAFLIVTSEGHILMNTGMPSSGPMIVESIRKLGFKPDDVKLMINGHAHIDHAGAFAFMKRLTGAQLAIMKDDVAAIESG DRGDFKYADDLAYEGVTVDRVLRDGDQIRMGDVLLTAYHTPGHTRGATTWIANLVVDGKAYLVAFPDGAGVNPGYRLAKD PSYPGIEGDYRKTHHALEMIKPDIWLAQHNEYYDFEGKRKRAETQGVSAWIDPEGYRRFIAGKKRAFEDEVDEELGAPKA AATSSADAPSNNR
Sequences:
>Translated_333_residues MMMRKIKMPMRLPATLMSTLLLALAWPVEAQVLPPNVPSKEQLANDNHLFLSLARKIFKWEEPAEPVRIVGPIYFVGTRG LGAFLIVTSEGHILMNTGMPSSGPMIVESIRKLGFKPDDVKLMINGHAHIDHAGAFAFMKRLTGAQLAIMKDDVAAIESG DRGDFKYADDLAYEGVTVDRVLRDGDQIRMGDVLLTAYHTPGHTRGATTWIANLVVDGKAYLVAFPDGAGVNPGYRLAKD PSYPGIEGDYRKTHHALEMIKPDIWLAQHNEYYDFEGKRKRAETQGVSAWIDPEGYRRFIAGKKRAFEDEVDEELGAPKA AATSSADAPSNNR >Mature_333_residues MMMRKIKMPMRLPATLMSTLLLALAWPVEAQVLPPNVPSKEQLANDNHLFLSLARKIFKWEEPAEPVRIVGPIYFVGTRG LGAFLIVTSEGHILMNTGMPSSGPMIVESIRKLGFKPDDVKLMINGHAHIDHAGAFAFMKRLTGAQLAIMKDDVAAIESG DRGDFKYADDLAYEGVTVDRVLRDGDQIRMGDVLLTAYHTPGHTRGATTWIANLVVDGKAYLVAFPDGAGVNPGYRLAKD PSYPGIEGDYRKTHHALEMIKPDIWLAQHNEYYDFEGKRKRAETQGVSAWIDPEGYRRFIAGKKRAFEDEVDEELGAPKA AATSSADAPSNNR
Specific function: Has a high activity against imipenem [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001018 - InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 36805; Mature: 36805
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMRKIKMPMRLPATLMSTLLLALAWPVEAQVLPPNVPSKEQLANDNHLFLSLARKIFKW CCCHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHCC EEPAEPVRIVGPIYFVGTRGLGAFLIVTSEGHILMNTGMPSSGPMIVESIRKLGFKPDDV CCCCCCEEEEEEEEEEECCCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHCCCCCCCE KLMINGHAHIDHAGAFAFMKRLTGAQLAIMKDDVAAIESGDRGDFKYADDLAYEGVTVDR EEEECCCCEECHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCCCCHHHHHCCCCCHHH VLRDGDQIRMGDVLLTAYHTPGHTRGATTWIANLVVDGKAYLVAFPDGAGVNPGYRLAKD HHCCCCCEEECEEEEEEEECCCCCCCHHHHEEHEEECCCEEEEECCCCCCCCCCCEECCC PSYPGIEGDYRKTHHALEMIKPDIWLAQHNEYYDFEGKRKRAETQGVSAWIDPEGYRRFI CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCEECCCCCHHHHHHCCCEEEECCHHHHHHH AGKKRAFEDEVDEELGAPKAAATSSADAPSNNR HCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMMRKIKMPMRLPATLMSTLLLALAWPVEAQVLPPNVPSKEQLANDNHLFLSLARKIFKW CCCHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCCCHHHHHHHHHHHCC EEPAEPVRIVGPIYFVGTRGLGAFLIVTSEGHILMNTGMPSSGPMIVESIRKLGFKPDDV CCCCCCEEEEEEEEEEECCCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHCCCCCCCE KLMINGHAHIDHAGAFAFMKRLTGAQLAIMKDDVAAIESGDRGDFKYADDLAYEGVTVDR EEEECCCCEECHHHHHHHHHHHCCCEEEEEECCHHHHCCCCCCCCCCHHHHHCCCCCHHH VLRDGDQIRMGDVLLTAYHTPGHTRGATTWIANLVVDGKAYLVAFPDGAGVNPGYRLAKD HHCCCCCEEECEEEEEEEECCCCCCCHHHHEEHEEECCCEEEEECCCCCCCCCCCEECCC PSYPGIEGDYRKTHHALEMIKPDIWLAQHNEYYDFEGKRKRAETQGVSAWIDPEGYRRFI CCCCCCCCCHHHHHHHHHHHCCCEEEEECCCEECCCCCHHHHHHCCCEEEECCHHHHHHH AGKKRAFEDEVDEELGAPKAAATSSADAPSNNR HCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8018721; 3931629; 9811546 [H]