| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is idhA [H]
Identifier: 146339270
GI number: 146339270
Start: 2391869
End: 2392870
Strand: Direct
Name: idhA [H]
Synonym: BRADO2244
Alternate gene names: 146339270
Gene position: 2391869-2392870 (Clockwise)
Preceding gene: 146339262
Following gene: 146339272
Centisome position: 32.08
GC content: 67.17
Gene sequence:
>1002_bases ATGATGATTATGCGGTTTGGACTTCTCGGCGCCGGCAGGATCGGGCGAATTCATGGTCTCAATGTCTCGTCGCGCGGCGA TGCACGGCTCGTCGCGGTGGCCGACGCCTCGAACGAAGCCGCGCTTTCGCTCGCACAGGCGACCGGCGCCGAGGTGGCCG ATGCGGATGCGATCATCGCCGATGCCAAGATCGACGCGATCCTGATCTGCACGCCGACCGATACGCATGCCGATCTGATC GAAGCCGCGGTGTCGGCCGGCAAGGCGGTGTTCTGCGAGAAGCCGGTCGACCTCGATTCGGACCGCATTTGCCGCTGCCT CGCCACAGTGGAAAAAGCCGGCAAGCCGCTGATGATCGGCTTTAACCGCCGCTTCGATCCGAACTTCGCGGCGCTGGAGA AGCGGCTGCGCAACGGCGAGGCCGGCGAGATCGAGATCGTCAGCATCATCTCGCGTGATCCGGCACCGCCGCCGGTGGAC TATGTGAAGCGCTCGGGCGGTCTCTTTCGCGACATGATGATCCATGATTTCGACATGGCGCGCTTCCTGCTCGCGGAGGA GCCGGTCGAGGTGTTCGCGCTCGGCTCAGCGTTGGTCGATAAGGCGATCGGCGAGGCCGGCGACGTCGACACCGCCGCGG TGCTGATGAAGACGGCGAGCGGGCGCATCGCGCAGATCTCGAACTCGCGCCGCGCCAGCTACGGCTACGACCAGCGCGTC GAGGTGCATGGCGCAAAGGGCATGCTGCGTGCCGGCAACGTGCACGAGACCACCGTCGAGATCGCGACCGGCCAGGGTTT TCGCGCCGACCCGGTGCAGAACTTCTTCCTCGAACGCTACAGCGCCGCCTATCGCGCCGAGCTCTCCGCCTTCATCGATG TCTGCGCCGGCAAGGCGGCGCCGTCGCCGAGCGGCCGCGATGGGCTGCGCGCCCAGATGCTCGCCGACGCCGCGACCTTG TCGGCGCGCGGCGGGCGGCCCGTCGCCGTCAAGGCCAGCTGA
Upstream 100 bases:
>100_bases ATGTGATGCTGCGATGCGGCGGATGACATTGAGAACAGCGGCTCCGTCCTTGACTGGACGGCGCAGAGAATGAAATGCTT CTTCGAAGAGTCAAGCAACG
Downstream 100 bases:
>100_bases CGATGACGGAGACCGAGCTGCTGCTGCGCTGCTACGCAGTCCAGGGCCTTGTCGCCGAGGCCGGGCGCATCGCGCTCGAT TATTTCAGCCGCAAGGACAG
Product: inositol 2-dehydrogenase
Products: NA
Alternate protein names: Myo-inositol 2-dehydrogenase; MI-dehydrogenase [H]
Number of amino acids: Translated: 333; Mature: 333
Protein sequence:
>333_residues MMIMRFGLLGAGRIGRIHGLNVSSRGDARLVAVADASNEAALSLAQATGAEVADADAIIADAKIDAILICTPTDTHADLI EAAVSAGKAVFCEKPVDLDSDRICRCLATVEKAGKPLMIGFNRRFDPNFAALEKRLRNGEAGEIEIVSIISRDPAPPPVD YVKRSGGLFRDMMIHDFDMARFLLAEEPVEVFALGSALVDKAIGEAGDVDTAAVLMKTASGRIAQISNSRRASYGYDQRV EVHGAKGMLRAGNVHETTVEIATGQGFRADPVQNFFLERYSAAYRAELSAFIDVCAGKAAPSPSGRDGLRAQMLADAATL SARGGRPVAVKAS
Sequences:
>Translated_333_residues MMIMRFGLLGAGRIGRIHGLNVSSRGDARLVAVADASNEAALSLAQATGAEVADADAIIADAKIDAILICTPTDTHADLI EAAVSAGKAVFCEKPVDLDSDRICRCLATVEKAGKPLMIGFNRRFDPNFAALEKRLRNGEAGEIEIVSIISRDPAPPPVD YVKRSGGLFRDMMIHDFDMARFLLAEEPVEVFALGSALVDKAIGEAGDVDTAAVLMKTASGRIAQISNSRRASYGYDQRV EVHGAKGMLRAGNVHETTVEIATGQGFRADPVQNFFLERYSAAYRAELSAFIDVCAGKAAPSPSGRDGLRAQMLADAATL SARGGRPVAVKAS >Mature_333_residues MMIMRFGLLGAGRIGRIHGLNVSSRGDARLVAVADASNEAALSLAQATGAEVADADAIIADAKIDAILICTPTDTHADLI EAAVSAGKAVFCEKPVDLDSDRICRCLATVEKAGKPLMIGFNRRFDPNFAALEKRLRNGEAGEIEIVSIISRDPAPPPVD YVKRSGGLFRDMMIHDFDMARFLLAEEPVEVFALGSALVDKAIGEAGDVDTAAVLMKTASGRIAQISNSRRASYGYDQRV EVHGAKGMLRAGNVHETTVEIATGQGFRADPVQNFFLERYSAAYRAELSAFIDVCAGKAAPSPSGRDGLRAQMLADAATL SARGGRPVAVKAS
Specific function: Involved in the oxidation of myo-inositol (MI) to 2- keto-myo-inositol (2KMI or 2-inosose) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gfo/idh/mocA family [H]
Homologues:
Organism=Escherichia coli, GI1787574, Length=221, Percent_Identity=28.9592760180996, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI87082405, Length=375, Percent_Identity=22.9333333333333, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI87081947, Length=181, Percent_Identity=28.1767955801105, Blast_Score=70, Evalue=2e-13, Organism=Drosophila melanogaster, GI24581117, Length=254, Percent_Identity=21.6535433070866, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000683 - InterPro: IPR004104 [H]
Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]
EC number: =1.1.1.18 [H]
Molecular weight: Translated: 35235; Mature: 35235
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIMRFGLLGAGRIGRIHGLNVSSRGDARLVAVADASNEAALSLAQATGAEVADADAIIA CEEEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCCCHHHEEHHHHCCCCCCCCCEEEE DAKIDAILICTPTDTHADLIEAAVSAGKAVFCEKPVDLDSDRICRCLATVEKAGKPLMIG ECCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEE FNRRFDPNFAALEKRLRNGEAGEIEIVSIISRDPAPPPVDYVKRSGGLFRDMMIHDFDMA CCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHH RFLLAEEPVEVFALGSALVDKAIGEAGDVDTAAVLMKTASGRIAQISNSRRASYGYDQRV HHHHHCCCHHEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEE EVHGAKGMLRAGNVHETTVEIATGQGFRADPVQNFFLERYSAAYRAELSAFIDVCAGKAA EEECCCCEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PSPSGRDGLRAQMLADAATLSARGGRPVAVKAS CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure MMIMRFGLLGAGRIGRIHGLNVSSRGDARLVAVADASNEAALSLAQATGAEVADADAIIA CEEEEECCCCCCCCCEEEECCCCCCCCEEEEEEECCCCHHHEEHHHHCCCCCCCCCEEEE DAKIDAILICTPTDTHADLIEAAVSAGKAVFCEKPVDLDSDRICRCLATVEKAGKPLMIG ECCCCEEEEECCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEE FNRRFDPNFAALEKRLRNGEAGEIEIVSIISRDPAPPPVDYVKRSGGLFRDMMIHDFDMA CCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCHHHHHHHHHHHH RFLLAEEPVEVFALGSALVDKAIGEAGDVDTAAVLMKTASGRIAQISNSRRASYGYDQRV HHHHHCCCHHEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCEE EVHGAKGMLRAGNVHETTVEIATGQGFRADPVQNFFLERYSAAYRAELSAFIDVCAGKAA EEECCCCEEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PSPSGRDGLRAQMLADAATLSARGGRPVAVKAS CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9802033; 11481431 [H]