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The map label for this gene is bexD [H]

Identifier: 146339248

GI number: 146339248

Start: 2365040

End: 2366146

Strand: Direct

Name: bexD [H]

Synonym: BRADO2217

Alternate gene names: 146339248

Gene position: 2365040-2366146 (Clockwise)

Preceding gene: 146339246

Following gene: 146339249

Centisome position: 31.72

GC content: 63.05

Gene sequence:

>1107_bases
ATGGCAGGGCCCGCCAGCACGGACATTCAATCCGAGAACAGCACAGCTCTGCCGTTCGCCGTGGTCAGGCTCGACAGCCG
AGTTCTGCAGATCCTCGAAAAGTCGGAGCCGAGGCACCTGCCGATGGCATTCGCCGATAGCCGGCCGCCGTCGAGCATCC
GCTTCGGAATCGGCGATATCGTGAGCGTCACGATCTTCGAGGCCACCGCCGGTGGCTTATATATTCCGCTCGAGGCGGGC
GTACGTCCGGGGAATTTCGTCACGATCCCTGATCAAGCCGTCGATAACGACGGCAACATCAGTGTTCCCTATGCCGGGGT
GATCCGTGCCGCGGGGCGTACCAACGTCCAGATCCAGGAAGACATCCTCAGCCGCATCAAGCGGCGGGCGATCGATCCTC
AAGTCGTGGTCACTTCCAGCCAGCAGAGATCGTCGCTGGTCAGCGTCTTCGGCGAGGTCAGAACGCCCGTGCGCTTCCCG
ATGCCGGCGGCCGGCGCCCAGGATCGACTGACTGACGCGATCACACGCGCCGGCGGCATCAGCGGTCCGGGCTGGGAGAC
CTGGGTTGTGCTCGAGCGCGGCGGCAAGCGCGCGACCGTGCCGTTCGGTAACCTCGTCTATTATCCTTCCAACAACATCT
TTGTTCAGCCTGGCGATCGGATCTATCTGTATCGCGAGCCGATCAAGTTTCTCGCCTTCGGGGCGACCGGCGCGCAGGGA
GAGTTTCCGTTCGACGCCTGGCGGATCAATCTGGCCCAAGCCGTCGGCAAGGCAGGCGGGCTGCTCGACGTGCAGGCCGA
TCCCGGGTCCATCTTCCTGTACAGGCGGGAGACACGCGAGGTGGCGGAACGGCTCGGTGTGAACTGCAGCAACGTCGACG
GCGACCAGGTGCCGATCGTGATCAGGGTGAGCTTCCAGGATCCATCAGGCTACTTCCTGGCGACCAAGTTGCAGATGCGT
CCGTTCGATCTGCTCTACGTCGCCAACGCGCCTCAGGTCGACGTGACCAAGGTGCTCAGCTTCATCAATTCGGTGGCGGT
CACGGCAGAGAACGGCATAACCGTTGCCAACGACTTCTACGTCGCTCGCGCCAACAGCCGGCTCTGA

Upstream 100 bases:

>100_bases
GCGTCGTCGTGGGCTTCGCGCGATGCGCTTGAGATCAGTTTCCGCGCTAGCCGCGTCGCTTCTCGCGTCCGTGATGCTCG
CTGGATGCGGTTTCATCCCG

Downstream 100 bases:

>100_bases
CCGATGATTGAGATGGTCTCGCTGGAATTCACGATCGTAACGGATCAACGTCGGTGAGAGTGCTTGAGATCATCGGGTCG
GTGGACCCGCGCCACGGCGG

Product: putative capsule polysaccharide export outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MAGPASTDIQSENSTALPFAVVRLDSRVLQILEKSEPRHLPMAFADSRPPSSIRFGIGDIVSVTIFEATAGGLYIPLEAG
VRPGNFVTIPDQAVDNDGNISVPYAGVIRAAGRTNVQIQEDILSRIKRRAIDPQVVVTSSQQRSSLVSVFGEVRTPVRFP
MPAAGAQDRLTDAITRAGGISGPGWETWVVLERGGKRATVPFGNLVYYPSNNIFVQPGDRIYLYREPIKFLAFGATGAQG
EFPFDAWRINLAQAVGKAGGLLDVQADPGSIFLYRRETREVAERLGVNCSNVDGDQVPIVIRVSFQDPSGYFLATKLQMR
PFDLLYVANAPQVDVTKVLSFINSVAVTAENGITVANDFYVARANSRL

Sequences:

>Translated_368_residues
MAGPASTDIQSENSTALPFAVVRLDSRVLQILEKSEPRHLPMAFADSRPPSSIRFGIGDIVSVTIFEATAGGLYIPLEAG
VRPGNFVTIPDQAVDNDGNISVPYAGVIRAAGRTNVQIQEDILSRIKRRAIDPQVVVTSSQQRSSLVSVFGEVRTPVRFP
MPAAGAQDRLTDAITRAGGISGPGWETWVVLERGGKRATVPFGNLVYYPSNNIFVQPGDRIYLYREPIKFLAFGATGAQG
EFPFDAWRINLAQAVGKAGGLLDVQADPGSIFLYRRETREVAERLGVNCSNVDGDQVPIVIRVSFQDPSGYFLATKLQMR
PFDLLYVANAPQVDVTKVLSFINSVAVTAENGITVANDFYVARANSRL
>Mature_367_residues
AGPASTDIQSENSTALPFAVVRLDSRVLQILEKSEPRHLPMAFADSRPPSSIRFGIGDIVSVTIFEATAGGLYIPLEAGV
RPGNFVTIPDQAVDNDGNISVPYAGVIRAAGRTNVQIQEDILSRIKRRAIDPQVVVTSSQQRSSLVSVFGEVRTPVRFPM
PAAGAQDRLTDAITRAGGISGPGWETWVVLERGGKRATVPFGNLVYYPSNNIFVQPGDRIYLYREPIKFLAFGATGAQGE
FPFDAWRINLAQAVGKAGGLLDVQADPGSIFLYRRETREVAERLGVNCSNVDGDQVPIVIRVSFQDPSGYFLATKLQMRP
FDLLYVANAPQVDVTKVLSFINSVAVTAENGITVANDFYVARANSRL

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the BexA, BexB and BexC proteins. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1787218, Length=297, Percent_Identity=28.2828282828283, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788376, Length=292, Percent_Identity=26.027397260274, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 39902; Mature: 39771

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGPASTDIQSENSTALPFAVVRLDSRVLQILEKSEPRHLPMAFADSRPPSSIRFGIGDI
CCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEECCCCE
VSVTIFEATAGGLYIPLEAGVRPGNFVTIPDQAVDNDGNISVPYAGVIRAAGRTNVQIQE
EEEEEEEECCCCEEEEEECCCCCCCEEECCCHHCCCCCCEECCHHHHEECCCCCCCEEHH
DILSRIKRRAIDPQVVVTSSQQRSSLVSVFGEVRTPVRFPMPAAGAQDRLTDAITRAGGI
HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHCCCC
SGPGWETWVVLERGGKRATVPFGNLVYYPSNNIFVQPGDRIYLYREPIKFLAFGATGAQG
CCCCCEEEEEEECCCCEEECCCCCEEEECCCCEEECCCCEEEEEECCEEEEEECCCCCCC
EFPFDAWRINLAQAVGKAGGLLDVQADPGSIFLYRRETREVAERLGVNCSNVDGDQVPIV
CCCHHHHEEEHHHHHCCCCCEEEEECCCCCEEEEECHHHHHHHHHCCCCCCCCCCCEEEE
IRVSFQDPSGYFLATKLQMRPFDLLYVANAPQVDVTKVLSFINSVAVTAENGITVANDFY
EEEEEECCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHEEEEECCCEEEECCEE
VARANSRL
EEECCCCC
>Mature Secondary Structure 
AGPASTDIQSENSTALPFAVVRLDSRVLQILEKSEPRHLPMAFADSRPPSSIRFGIGDI
CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEECCCCE
VSVTIFEATAGGLYIPLEAGVRPGNFVTIPDQAVDNDGNISVPYAGVIRAAGRTNVQIQE
EEEEEEEECCCCEEEEEECCCCCCCEEECCCHHCCCCCCEECCHHHHEECCCCCCCEEHH
DILSRIKRRAIDPQVVVTSSQQRSSLVSVFGEVRTPVRFPMPAAGAQDRLTDAITRAGGI
HHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHCCCC
SGPGWETWVVLERGGKRATVPFGNLVYYPSNNIFVQPGDRIYLYREPIKFLAFGATGAQG
CCCCCEEEEEEECCCCEEECCCCCEEEECCCCEEECCCCEEEEEECCEEEEEECCCCCCC
EFPFDAWRINLAQAVGKAGGLLDVQADPGSIFLYRRETREVAERLGVNCSNVDGDQVPIV
CCCHHHHEEEHHHHHCCCCCEEEEECCCCCEEEEECHHHHHHHHHCCCCCCCCCCCEEEE
IRVSFQDPSGYFLATKLQMRPFDLLYVANAPQVDVTKVLSFINSVAVTAENGITVANDFY
EEEEEECCCCEEEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHEEEEECCCEEEECCEE
VARANSRL
EEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2082145 [H]