| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339224
Identifier: 146339224
GI number: 146339224
Start: 2322124
End: 2322720
Strand: Reverse
Name: 146339224
Synonym: BRADO2189
Alternate gene names: NA
Gene position: 2322720-2322124 (Counterclockwise)
Preceding gene: 146339225
Following gene: 146339223
Centisome position: 31.15
GC content: 65.49
Gene sequence:
>597_bases GTGGCGGTCTGCGCCGCTCTCGGCGCCCATCCCGCGAGCGCCTTCCTCGCACGCCCCGCTCTCTTCGCGAAGCTGGATGC CGTCGCAAAGGCGCCAAGCGGTTGGCTACGCTTCTGCGCGGATCAGCCTCAGGAATGTCGTCCGAGCGCGGATGGCCACG GCGAACTGCAACTCACGCCGGACAAGCTGCAGCAGCTTTACGTGATCAACGCCTACGTCAACGACCGCGTCAAATATACG ACGGACAAGGTGCTCTACGGCGAAGAGGAGCGCTGGGCGATGCCGTTCGACCGCGGCGACTGCGAGGACATCGTGCTGCT CAAGCGTCGCCTGCTCAGCGAGGCCGGCTGGCCTGCCGGCGCGCTGCTGGTGACCGTGGTCCAAGGCCGGACGGGCGAGG TCGACCGTCACGCCGTCCTGACGGTCCGCACGGATCGCGGCGAGATGATCATGGACAACCTCACGCCGGAAATCCTGTTC TGGTACGAAACGAGCTATCGCTACCTGCTGCGACAAAGTTCGCAGGATCCCAACGTCTGGCTGGCATTCTCCAGCAGCCA ACCCCGGCCTGAGCAGGTCAGCAGCGTCCGACCGTGA
Upstream 100 bases:
>100_bases CGAGCCGATCAGGCCCGACGGATATTGGCAGATGTGGATGCTTGGCACCTCGACGACGGCCGCGCGACGCGCGATCACAC GCGCCTGCGCAACAGCTGCT
Downstream 100 bases:
>100_bases AGCCGCTCACGGCGCCGCGCGGCCATCTTTGTTCACGGGCCTTGCTCGTGGCCTTCCCCGCTGCGACCTGCCGATTCAGC CATATTCATTTTGATTCAAC
Product: putative peptide signal
Products: NA
Alternate protein names: Transglutaminase-Like Cysteine Peptidase BTLCP; Transglutaminase Family Protein Cysteine Peptidase Btlcp; Periplasmic Protein-Like Protein; And 4.1 Domain Protein; Peptide Signal; Signal Peptide; Transglutaminase Cysteine Peptidase BTLCP; Transglutaminase-Like Cysteine Peptidase; Transglutaminase-Like Protein; Bacterial Transglutaminase-Like Cysteine Peptidase
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MAVCAALGAHPASAFLARPALFAKLDAVAKAPSGWLRFCADQPQECRPSADGHGELQLTPDKLQQLYVINAYVNDRVKYT TDKVLYGEEERWAMPFDRGDCEDIVLLKRRLLSEAGWPAGALLVTVVQGRTGEVDRHAVLTVRTDRGEMIMDNLTPEILF WYETSYRYLLRQSSQDPNVWLAFSSSQPRPEQVSSVRP
Sequences:
>Translated_198_residues MAVCAALGAHPASAFLARPALFAKLDAVAKAPSGWLRFCADQPQECRPSADGHGELQLTPDKLQQLYVINAYVNDRVKYT TDKVLYGEEERWAMPFDRGDCEDIVLLKRRLLSEAGWPAGALLVTVVQGRTGEVDRHAVLTVRTDRGEMIMDNLTPEILF WYETSYRYLLRQSSQDPNVWLAFSSSQPRPEQVSSVRP >Mature_197_residues AVCAALGAHPASAFLARPALFAKLDAVAKAPSGWLRFCADQPQECRPSADGHGELQLTPDKLQQLYVINAYVNDRVKYTT DKVLYGEEERWAMPFDRGDCEDIVLLKRRLLSEAGWPAGALLVTVVQGRTGEVDRHAVLTVRTDRGEMIMDNLTPEILFW YETSYRYLLRQSSQDPNVWLAFSSSQPRPEQVSSVRP
Specific function: Unknown
COG id: COG3672
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22241; Mature: 22109
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVCAALGAHPASAFLARPALFAKLDAVAKAPSGWLRFCADQPQECRPSADGHGELQLTP CCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHCCCCCCCCCEEEECH DKLQQLYVINAYVNDRVKYTTDKVLYGEEERWAMPFDRGDCEDIVLLKRRLLSEAGWPAG HHHHEEEEEEEEECCCEEEEECEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCC ALLVTVVQGRTGEVDRHAVLTVRTDRGEMIMDNLTPEILFWYETSYRYLLRQSSQDPNVW EEEEEEECCCCCCCCCEEEEEEECCCCCEEECCCCCEEEEEEECHHHHHHHCCCCCCCEE LAFSSSQPRPEQVSSVRP EEECCCCCCHHHHCCCCC >Mature Secondary Structure AVCAALGAHPASAFLARPALFAKLDAVAKAPSGWLRFCADQPQECRPSADGHGELQLTP CEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHCCCCCCCCCEEEECH DKLQQLYVINAYVNDRVKYTTDKVLYGEEERWAMPFDRGDCEDIVLLKRRLLSEAGWPAG HHHHEEEEEEEEECCCEEEEECEEEECCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCC ALLVTVVQGRTGEVDRHAVLTVRTDRGEMIMDNLTPEILFWYETSYRYLLRQSSQDPNVW EEEEEEECCCCCCCCCEEEEEEECCCCCEEECCCCCEEEEEEECHHHHHHHCCCCCCCEE LAFSSSQPRPEQVSSVRP EEECCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA