Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is 146339179

Identifier: 146339179

GI number: 146339179

Start: 2274168

End: 2275373

Strand: Reverse

Name: 146339179

Synonym: BRADO2139

Alternate gene names: NA

Gene position: 2275373-2274168 (Counterclockwise)

Preceding gene: 146339180

Following gene: 146339178

Centisome position: 30.51

GC content: 63.35

Gene sequence:

>1206_bases
ATGCGATATCAGACACGCCTGCTCCCCTGGCTGCTCGGGGCCTCACTCGCCGCTACCGCCGCGCACGCGGCCGCCAACAA
GGTCGTGATCGGCGACATCGATGACATGTCAGGACTCTATGCCGACGTGATCGGCCCGGGCGGTGTCGAAGCCGCCAAGA
TGGCGATCGAGGATTTCGGCGGCAGCGTGCTCGGTAACAAGATCGAGTTCATGGAGACGGATCACCAGAACAAGCCCGAC
GTCGGCGCGCAGAAGCTGCGTGAATGGGCCGATCGCGACGGCGTCACCATGATCCTCGGCGGCTCCAACACCGGCGTCAG
CCTTGCGATGGCCAATGCCGCCAAGGAGAAGAAGGTGCCGTTCATCGCGATCGGTGCCGCCGGCGCCTCGCTGACTGGCA
AGGACTGCACGCCCTATACCGTCCACTACGCCTACGACACGACCTCGCTGGCCAACGGCACCGCCAAGACCATGGTCAGC
CAGGGCGGCAAGAGCTGGTTCTTCCTGACCGCCGACTACGCCTTCGGCACTCAGCTGCAGGAGGCCGCCTCCAAGGTCGT
GGAGGCCAATGGCGGCAAGGTGGTGGGCGCCGTGCGCGTACCGCTCTCGACTTCGGACTTCTCCAGCTATTTGCTGCAGG
CGCAGAGCTCGGGCGCCCAGGTGCTCGGCCTCGCCAATGCCGGCAACGACTTCACCAACTCGATCAAGGCGGCCGATGAG
TTCGGCATCGCCAAGACGATGAAACCGGCGGCGCTGCTCGCCTTCATCAGCGACATCCACAGTCTCGGCCTGAAGACCGC
GCAGGGGCTGTATCTGACCACCGGCTGGTACTGGGATCTCAACAACAAGACCCGCGCCTTCGCGAAGCGCTATTTCGAGA
AGACCAAGCGCGAGCCCACCATGAACCAGGCGGCGTACTACTCGGCAACACTGACCTATCTGAATGCGGTGAAGGCGGCG
GGCACCACCGACTCCGACAAGGTCATGGAGCAGCTGCGCAAGACGAAGATCGACGACATGTTCACGTCCGACGGCAAGAT
CCGCGCCGACGGACTGATGGAGCATGAGATGTACATCATGCAGGTCAAGAAGCCGGAGGAGTCGAAATACCCCTGGGACT
ATTACAAGCTGGTGCAGACGATGTCGGGCGAGGAGGCGTTCGGCAAGCTTGCCGATTCGGCCTGCCCCTTGGCGCACGGG
CACTGA

Upstream 100 bases:

>100_bases
AAAAAGTTCCTCTGTCCTGGTTTGAACCAAAGGCGAATTGGAAAGCCCGGTTGTGGGTTCCTAAGGTCCGGCACCAAAAA
AGAAACGAGGGAACGCCATC

Downstream 100 bases:

>100_bases
GGCCGGCAGGCGCGGCTGCGGATCAGGTCGCCACCTGCCCGCAGCCGCCGCTGCTCCGGAACGATCTCAATTTCACCGTC
GTCGACGGACGAGACCCGCG

Product: ABC transporter periplasmic substrate binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MRYQTRLLPWLLGASLAATAAHAAANKVVIGDIDDMSGLYADVIGPGGVEAAKMAIEDFGGSVLGNKIEFMETDHQNKPD
VGAQKLREWADRDGVTMILGGSNTGVSLAMANAAKEKKVPFIAIGAAGASLTGKDCTPYTVHYAYDTTSLANGTAKTMVS
QGGKSWFFLTADYAFGTQLQEAASKVVEANGGKVVGAVRVPLSTSDFSSYLLQAQSSGAQVLGLANAGNDFTNSIKAADE
FGIAKTMKPAALLAFISDIHSLGLKTAQGLYLTTGWYWDLNNKTRAFAKRYFEKTKREPTMNQAAYYSATLTYLNAVKAA
GTTDSDKVMEQLRKTKIDDMFTSDGKIRADGLMEHEMYIMQVKKPEESKYPWDYYKLVQTMSGEEAFGKLADSACPLAHG
H

Sequences:

>Translated_401_residues
MRYQTRLLPWLLGASLAATAAHAAANKVVIGDIDDMSGLYADVIGPGGVEAAKMAIEDFGGSVLGNKIEFMETDHQNKPD
VGAQKLREWADRDGVTMILGGSNTGVSLAMANAAKEKKVPFIAIGAAGASLTGKDCTPYTVHYAYDTTSLANGTAKTMVS
QGGKSWFFLTADYAFGTQLQEAASKVVEANGGKVVGAVRVPLSTSDFSSYLLQAQSSGAQVLGLANAGNDFTNSIKAADE
FGIAKTMKPAALLAFISDIHSLGLKTAQGLYLTTGWYWDLNNKTRAFAKRYFEKTKREPTMNQAAYYSATLTYLNAVKAA
GTTDSDKVMEQLRKTKIDDMFTSDGKIRADGLMEHEMYIMQVKKPEESKYPWDYYKLVQTMSGEEAFGKLADSACPLAHG
H
>Mature_401_residues
MRYQTRLLPWLLGASLAATAAHAAANKVVIGDIDDMSGLYADVIGPGGVEAAKMAIEDFGGSVLGNKIEFMETDHQNKPD
VGAQKLREWADRDGVTMILGGSNTGVSLAMANAAKEKKVPFIAIGAAGASLTGKDCTPYTVHYAYDTTSLANGTAKTMVS
QGGKSWFFLTADYAFGTQLQEAASKVVEANGGKVVGAVRVPLSTSDFSSYLLQAQSSGAQVLGLANAGNDFTNSIKAADE
FGIAKTMKPAALLAFISDIHSLGLKTAQGLYLTTGWYWDLNNKTRAFAKRYFEKTKREPTMNQAAYYSATLTYLNAVKAA
GTTDSDKVMEQLRKTKIDDMFTSDGKIRADGLMEHEMYIMQVKKPEESKYPWDYYKLVQTMSGEEAFGKLADSACPLAHG
H

Specific function: Component of an amino-acid transport system (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the leucine-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001828
- InterPro:   IPR000709 [H]

Pfam domain/function: PF01094 ANF_receptor [H]

EC number: NA

Molecular weight: Translated: 43143; Mature: 43143

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYQTRLLPWLLGASLAATAAHAAANKVVIGDIDDMSGLYADVIGPGGVEAAKMAIEDFG
CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCHHHHHCCCCCHHHHHHHHHHCC
GSVLGNKIEFMETDHQNKPDVGAQKLREWADRDGVTMILGGSNTGVSLAMANAAKEKKVP
CCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEEEEECCHHHCCCC
FIAIGAAGASLTGKDCTPYTVHYAYDTTSLANGTAKTMVSQGGKSWFFLTADYAFGTQLQ
EEEEECCCCCCCCCCCCCEEEEEEECCCHHCCCHHHHHHHCCCCEEEEEEECCHHHHHHH
EAASKVVEANGGKVVGAVRVPLSTSDFSSYLLQAQSSGAQVLGLANAGNDFTNSIKAADE
HHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH
FGIAKTMKPAALLAFISDIHSLGLKTAQGLYLTTGWYWDLNNKTRAFAKRYFEKTKREPT
HCCHHHCCHHHHHHHHHHHHHHCCHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCC
MNQAAYYSATLTYLNAVKAAGTTDSDKVMEQLRKTKIDDMFTSDGKIRADGLMEHEMYIM
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEE
QVKKPEESKYPWDYYKLVQTMSGEEAFGKLADSACPLAHGH
EEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MRYQTRLLPWLLGASLAATAAHAAANKVVIGDIDDMSGLYADVIGPGGVEAAKMAIEDFG
CCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHCCHHHHHCCCCCHHHHHHHHHHCC
GSVLGNKIEFMETDHQNKPDVGAQKLREWADRDGVTMILGGSNTGVSLAMANAAKEKKVP
CCCCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEEEEECCHHHCCCC
FIAIGAAGASLTGKDCTPYTVHYAYDTTSLANGTAKTMVSQGGKSWFFLTADYAFGTQLQ
EEEEECCCCCCCCCCCCCEEEEEEECCCHHCCCHHHHHHHCCCCEEEEEEECCHHHHHHH
EAASKVVEANGGKVVGAVRVPLSTSDFSSYLLQAQSSGAQVLGLANAGNDFTNSIKAADE
HHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHH
FGIAKTMKPAALLAFISDIHSLGLKTAQGLYLTTGWYWDLNNKTRAFAKRYFEKTKREPT
HCCHHHCCHHHHHHHHHHHHHHCCHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHCCCCC
MNQAAYYSATLTYLNAVKAAGTTDSDKVMEQLRKTKIDDMFTSDGKIRADGLMEHEMYIM
CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEE
QVKKPEESKYPWDYYKLVQTMSGEEAFGKLADSACPLAHGH
EEECCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA