| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339165
Identifier: 146339165
GI number: 146339165
Start: 2259126
End: 2259641
Strand: Direct
Name: 146339165
Synonym: BRADO2123
Alternate gene names: NA
Gene position: 2259126-2259641 (Clockwise)
Preceding gene: 146339164
Following gene: 146339167
Centisome position: 30.3
GC content: 66.47
Gene sequence:
>516_bases ATGGCCAAGACCGCCACGCTGAAACGGCCGGCAAAGACCGCGCCGAAGCCGGCTCCGAAGCCGGCTCCCAAGTCGGCCGT GAAGGCCGCCGCCAAGTCTGCGAAGACAAACTACGTATTGGACGACCAGATCGGCTTCATCCTCCGCCAGGTCTGGCAGC GCCACACCATGATCTTCGCCCGCGACATCGGCAGCAACCTGACGCCGACGCAATGGGCCGCGATGTCGAAGCTGGTCGAG ACCGGCCCGTGCTCGCAGAATCAGCTCGGCCGCTTCACGGCAATGGACGTTGCGACGATCAAGGGCGTGATCGACCGGCT GACGGCGCGGGGGCTGACGGAGACCAGCGCGGATCCGCAGGACGGCCGGCGGCTGCTGGTCAGCTTGACCCGCGCGGGCC AGCAGCTCGCGGAAAAGACCGCGCCATTGGCGCTCGCGATTTCCAAGGAAACGCTTGCGCCGCTCGATGCGAAAGAGCGC GAGACGCTGTTGTCGCTGTTGAGCCGACTGCGGTAG
Upstream 100 bases:
>100_bases ATCGAACGCGGCCGCATCTGCTTTGCCGGCACCATGGCCGAACTCGACGCGCGGCCCGACATCCGCGACGCCCACCTGTC GATCTGAGGCGAGGAACCAG
Downstream 100 bases:
>100_bases TCCAACGCGCAGAGCTCGTGGGGTGGGCAAAGCGAAGCGTGCCCACCATTCTCACCAGGACCGCATCTGCCAACGGTGGG CACGCGCCGCCTGACGGCGC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; Transcriptional Regulator Protein; Multiple Antibiotic Resistance Protein MarR; MarR-Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator MarR; MarR Family Transcription Regulator Protein
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MAKTATLKRPAKTAPKPAPKPAPKSAVKAAAKSAKTNYVLDDQIGFILRQVWQRHTMIFARDIGSNLTPTQWAAMSKLVE TGPCSQNQLGRFTAMDVATIKGVIDRLTARGLTETSADPQDGRRLLVSLTRAGQQLAEKTAPLALAISKETLAPLDAKER ETLLSLLSRLR
Sequences:
>Translated_171_residues MAKTATLKRPAKTAPKPAPKPAPKSAVKAAAKSAKTNYVLDDQIGFILRQVWQRHTMIFARDIGSNLTPTQWAAMSKLVE TGPCSQNQLGRFTAMDVATIKGVIDRLTARGLTETSADPQDGRRLLVSLTRAGQQLAEKTAPLALAISKETLAPLDAKER ETLLSLLSRLR >Mature_170_residues AKTATLKRPAKTAPKPAPKPAPKSAVKAAAKSAKTNYVLDDQIGFILRQVWQRHTMIFARDIGSNLTPTQWAAMSKLVET GPCSQNQLGRFTAMDVATIKGVIDRLTARGLTETSADPQDGRRLLVSLTRAGQQLAEKTAPLALAISKETLAPLDAKERE TLLSLLSRLR
Specific function: Unknown
COG id: COG1846
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18530; Mature: 18399
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKTATLKRPAKTAPKPAPKPAPKSAVKAAAKSAKTNYVLDDQIGFILRQVWQRHTMIFA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH RDIGSNLTPTQWAAMSKLVETGPCSQNQLGRFTAMDVATIKGVIDRLTARGLTETSADPQ HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH DGRRLLVSLTRAGQQLAEKTAPLALAISKETLAPLDAKERETLLSLLSRLR HHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure AKTATLKRPAKTAPKPAPKPAPKSAVKAAAKSAKTNYVLDDQIGFILRQVWQRHTMIFA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH RDIGSNLTPTQWAAMSKLVETGPCSQNQLGRFTAMDVATIKGVIDRLTARGLTETSADPQ HHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHH DGRRLLVSLTRAGQQLAEKTAPLALAISKETLAPLDAKERETLLSLLSRLR HHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA