| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339142
Identifier: 146339142
GI number: 146339142
Start: 2232308
End: 2233798
Strand: Reverse
Name: 146339142
Synonym: BRADO2097
Alternate gene names: NA
Gene position: 2233798-2232308 (Counterclockwise)
Preceding gene: 146339143
Following gene: 146339139
Centisome position: 29.96
GC content: 65.39
Gene sequence:
>1491_bases ATGCGCCCTGGCCTCACGGCCGGACCTCCGCCGGACCGTGTCGCGGTGGTGCAGATCGGAGCCGACCACACCTGGGCGTT GGCCATTGCCCCCGACTGGACTTGGTTCGTGGCCGGCACCCAATCCGCGATCGCCGTTCGGGATCTGAAGACCGGAACCA TTCTGCGCGAATTCCTGGCGGACGCTGAGGACTGGTTCACCCGCATCGCGATCTCGCATGACGGGCGCAGCGTCGTTGCA CGGCTCGCGCGCGATGGCAACGAGGTCGCGACGATCGGCTGGTCTGCGCAGACGGGCGCGCGGATCGACGATACCGCTGA TATCGCGGGCTCCCTCGGCCCCGGCGACTGGAGCTGGGTCGTTCACAAATGGCCGTCATCCTGGCCGCATCCTACCGGAA GGTACGAGCGGACCGATGAGAAGGCCTATCTGATCGCGCAGAAACTGGCGACGCTGGTCGATGTCGAAAAGGTCGAAGGC ATCGATGCGACCGAGCGCCCGGACATCATCCAAGTCACGACCTCGGGCGAAGCCAAGGACGCGTTCGATCCGATGGATCC ACTGGCGGAGCCAGCCTTTTCCTATCACGTCTATTTCATCGACATGAACCGGAAGACGATCGTGGCCGATGTCTCTGGAA AGACGCTGCGCACCTTCTGCGGGCGTCCGCACGGAGCGTTTGCATTCGACGGCCACCATCTGCTGCTCGCGCCGACCGAA CTCGACGCCAGCAGCGCCAGCATCGATGCGATGCTCGTCGATCTCGACGCGGCGCCTCCGGCGGTGCGATGGGCCTCGCC GTGCAGGAACTACCAGGTGTCCGGCATCGAGTTCTCGCGCGGGCTGATCGTCGTATCGGAGACGCCGGATCAGGCGACGC TATGGGACCCCGCAACGGCGCGCCGCGTGATCCATATCGACGACATCTTCGGCAGCGACCTCCTCACCTGGTCCGACGAT CGCACGACGTTTGCCGTCGGCTACGATTATCAGCGGGCGGTCGACGAGCCGCGCGCGTTCGGCGTCGAGATCATCCGCGC CAACAAACGGCAGCTGCTGGTGACGGAGGCCGAGGTCCTCGAGATTCGCCTCGGCGCCGACGGCAGCAAGGTCTTCGCCC GGACCAAGGACGGCTGGTCGGCCTGGGACAGCGCAAACGGCGCGAGGCTGTCATCCTTCAGCGTCCCCGCTGCGCCTGAG GATTCCGTCAGGGAGGCTCGCGCGGACGATCCCGCGCGGGCCCAGGTCTACGTCCGTTCTCTTCGCACGTTCGATCCCTG TCCGGATCTCCGCGCGGCGGCGTTTCTCTCCCTCAAACTCTGCGACGTCGCGTCGAAACATGCGCTCTGGCTGGCAACGG CGGGCGAGACCGCGTACGGCCGCGAATTTCTGATCATGCGCTTTGAGGATGGGCGGGTTCTCGCGTCGGACGGAGCGGAC GACTTCATTAAACTCGTGAAAGAGTTCGATGCGCAGCCGTTCGCGCGTTAG
Upstream 100 bases:
>100_bases CATTCGGAGGCGTCTCATGGAGACGAAACGAGAGCACTGGCATGCGGCGCGACATTGGTTGGCCGCAGCGTTCGTCCTTG GACTGGGACTCACGATTCCC
Downstream 100 bases:
>100_bases CGAGCCGCTTGGTGGGCGCGACGCATGGAGGAGATCTCCTTCAAAGCAACGCGGCAGCGGTTGGTGCTGCCCGCAGCTCA AATCGAGCTTTCGCTCAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MRPGLTAGPPPDRVAVVQIGADHTWALAIAPDWTWFVAGTQSAIAVRDLKTGTILREFLADAEDWFTRIAISHDGRSVVA RLARDGNEVATIGWSAQTGARIDDTADIAGSLGPGDWSWVVHKWPSSWPHPTGRYERTDEKAYLIAQKLATLVDVEKVEG IDATERPDIIQVTTSGEAKDAFDPMDPLAEPAFSYHVYFIDMNRKTIVADVSGKTLRTFCGRPHGAFAFDGHHLLLAPTE LDASSASIDAMLVDLDAAPPAVRWASPCRNYQVSGIEFSRGLIVVSETPDQATLWDPATARRVIHIDDIFGSDLLTWSDD RTTFAVGYDYQRAVDEPRAFGVEIIRANKRQLLVTEAEVLEIRLGADGSKVFARTKDGWSAWDSANGARLSSFSVPAAPE DSVREARADDPARAQVYVRSLRTFDPCPDLRAAAFLSLKLCDVASKHALWLATAGETAYGREFLIMRFEDGRVLASDGAD DFIKLVKEFDAQPFAR
Sequences:
>Translated_496_residues MRPGLTAGPPPDRVAVVQIGADHTWALAIAPDWTWFVAGTQSAIAVRDLKTGTILREFLADAEDWFTRIAISHDGRSVVA RLARDGNEVATIGWSAQTGARIDDTADIAGSLGPGDWSWVVHKWPSSWPHPTGRYERTDEKAYLIAQKLATLVDVEKVEG IDATERPDIIQVTTSGEAKDAFDPMDPLAEPAFSYHVYFIDMNRKTIVADVSGKTLRTFCGRPHGAFAFDGHHLLLAPTE LDASSASIDAMLVDLDAAPPAVRWASPCRNYQVSGIEFSRGLIVVSETPDQATLWDPATARRVIHIDDIFGSDLLTWSDD RTTFAVGYDYQRAVDEPRAFGVEIIRANKRQLLVTEAEVLEIRLGADGSKVFARTKDGWSAWDSANGARLSSFSVPAAPE DSVREARADDPARAQVYVRSLRTFDPCPDLRAAAFLSLKLCDVASKHALWLATAGETAYGREFLIMRFEDGRVLASDGAD DFIKLVKEFDAQPFAR >Mature_496_residues MRPGLTAGPPPDRVAVVQIGADHTWALAIAPDWTWFVAGTQSAIAVRDLKTGTILREFLADAEDWFTRIAISHDGRSVVA RLARDGNEVATIGWSAQTGARIDDTADIAGSLGPGDWSWVVHKWPSSWPHPTGRYERTDEKAYLIAQKLATLVDVEKVEG IDATERPDIIQVTTSGEAKDAFDPMDPLAEPAFSYHVYFIDMNRKTIVADVSGKTLRTFCGRPHGAFAFDGHHLLLAPTE LDASSASIDAMLVDLDAAPPAVRWASPCRNYQVSGIEFSRGLIVVSETPDQATLWDPATARRVIHIDDIFGSDLLTWSDD RTTFAVGYDYQRAVDEPRAFGVEIIRANKRQLLVTEAEVLEIRLGADGSKVFARTKDGWSAWDSANGARLSSFSVPAAPE DSVREARADDPARAQVYVRSLRTFDPCPDLRAAAFLSLKLCDVASKHALWLATAGETAYGREFLIMRFEDGRVLASDGAD DFIKLVKEFDAQPFAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54417; Mature: 54417
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPGLTAGPPPDRVAVVQIGADHTWALAIAPDWTWFVAGTQSAIAVRDLKTGTILREFLA CCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEECCHHHHHHHHHH DAEDWFTRIAISHDGRSVVARLARDGNEVATIGWSAQTGARIDDTADIAGSLGPGDWSWV CHHHHEEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCCEEEE VHKWPSSWPHPTGRYERTDEKAYLIAQKLATLVDVEKVEGIDATERPDIIQVTTSGEAKD EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC AFDPMDPLAEPAFSYHVYFIDMNRKTIVADVSGKTLRTFCGRPHGAFAFDGHHLLLAPTE CCCCCCHHHCCCEEEEEEEEEECCEEEEEECCCCHHHHHHCCCCCCEEECCCEEEEEECC LDASSASIDAMLVDLDAAPPAVRWASPCRNYQVSGIEFSRGLIVVSETPDQATLWDPATA CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEECCEEEECCEEEEECCCCCCEEECCHHC RRVIHIDDIFGSDLLTWSDDRTTFAVGYDYQRAVDEPRAFGVEIIRANKRQLLVTEAEVL CEEEEEECCCCCCCEEECCCCEEEEECCCHHHHHCCCHHCCEEEEECCCCEEEEEEEEEE EIRLGADGSKVFARTKDGWSAWDSANGARLSSFSVPAAPEDSVREARADDPARAQVYVRS EEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHH LRTFDPCPDLRAAAFLSLKLCDVASKHALWLATAGETAYGREFLIMRFEDGRVLASDGAD HHCCCCCCCHHHHHHEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCEEEECCCHH DFIKLVKEFDAQPFAR HHHHHHHHHCCCCCCC >Mature Secondary Structure MRPGLTAGPPPDRVAVVQIGADHTWALAIAPDWTWFVAGTQSAIAVRDLKTGTILREFLA CCCCCCCCCCCCCEEEEEECCCCEEEEEECCCEEEEEECCCCEEEEEECCHHHHHHHHHH DAEDWFTRIAISHDGRSVVARLARDGNEVATIGWSAQTGARIDDTADIAGSLGPGDWSWV CHHHHEEEEEEECCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCCEEEE VHKWPSSWPHPTGRYERTDEKAYLIAQKLATLVDVEKVEGIDATERPDIIQVTTSGEAKD EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC AFDPMDPLAEPAFSYHVYFIDMNRKTIVADVSGKTLRTFCGRPHGAFAFDGHHLLLAPTE CCCCCCHHHCCCEEEEEEEEEECCEEEEEECCCCHHHHHHCCCCCCEEECCCEEEEEECC LDASSASIDAMLVDLDAAPPAVRWASPCRNYQVSGIEFSRGLIVVSETPDQATLWDPATA CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCEECCEEEECCEEEEECCCCCCEEECCHHC RRVIHIDDIFGSDLLTWSDDRTTFAVGYDYQRAVDEPRAFGVEIIRANKRQLLVTEAEVL CEEEEEECCCCCCCEEECCCCEEEEECCCHHHHHCCCHHCCEEEEECCCCEEEEEEEEEE EIRLGADGSKVFARTKDGWSAWDSANGARLSSFSVPAAPEDSVREARADDPARAQVYVRS EEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHH LRTFDPCPDLRAAAFLSLKLCDVASKHALWLATAGETAYGREFLIMRFEDGRVLASDGAD HHCCCCCCCHHHHHHEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCEEEECCCHH DFIKLVKEFDAQPFAR HHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA