| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339137
Identifier: 146339137
GI number: 146339137
Start: 2228370
End: 2229107
Strand: Direct
Name: 146339137
Synonym: BRADO2091
Alternate gene names: NA
Gene position: 2228370-2229107 (Clockwise)
Preceding gene: 146339136
Following gene: 146339140
Centisome position: 29.88
GC content: 63.01
Gene sequence:
>738_bases ATGACCATCCCGAGGATCGTCGATCTTGACGCATGGACCGAGGCGCATCGCGCCCATCTCCTCAAGGAAAAGGCCTTCAT GCGGCAACGTGATGCGCTGGCAGCCGAGCGTCGGGCGCTGCCCTGGCTCAGGGTCGAGAAGGATTATCTGTTCCAGGCGC CGCAGGGGTCCGTCAGTCTCGGCGGGCTGTTTCAGGGCCGTAGCCAACTGATCGTCTACCATTTCATGATGGCGCCCGGC GATCCGCACCGCTGTCCCGGTTGCTCCTTCCTGTGCGACCATATTGACGGCGCCAACCAGCATCTCGCCCATCACGACGT CAGCCTGGTCGCCGTATCGCGTGCCCCGCTCGCCGAGATCGTGCCGTTCAAGACGCGGATGGGCTGGGCGTTCGATTGGG TGTCCTCGTACGGAAGCGACTTCAATTTCGACTTCCAGGTCTCGTTCTCTGACGAGCAGATCGCCACGGGACAGGCGATC TACAATTTTGCGCCGCTGCGTCGTGGCTCGCACGAGCTTCCGGGCCTCACCGTATTCACCAGGGACGCGGCCGGCGACAT CTTCTGCACATTCCAGGTCCGCTCCCGCGGCGGCGATCCACTGATCGGCGCCTATCATTATCTCGATCTCACGCCCAAGG GCCGCAACGAGACCGGTCGCGGCAATCTCTCGGACTGGGTCCGCCTGCACGACGAATATGAGGATAGCAACACGCGAAGC GGCGATCGCGGGCACTAG
Upstream 100 bases:
>100_bases GGACCTGCGACACCCAATGCGCCGTAGATAATCATGGAGACATTTGTCGGAAGAGCGGTTGTCGGATCGTCCTCCGAGCG TCCAACCAGGAGGAACTGAC
Downstream 100 bases:
>100_bases TCCTACGAGCGTGGGGCGGATCAGCGCAGCGTGATCCGCCGCCTGCTCGATCGCGGTGACAATGCAACTATCGAGAGCAA CGGACCGCGTGCATGGTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTIPRIVDLDAWTEAHRAHLLKEKAFMRQRDALAAERRALPWLRVEKDYLFQAPQGSVSLGGLFQGRSQLIVYHFMMAPG DPHRCPGCSFLCDHIDGANQHLAHHDVSLVAVSRAPLAEIVPFKTRMGWAFDWVSSYGSDFNFDFQVSFSDEQIATGQAI YNFAPLRRGSHELPGLTVFTRDAAGDIFCTFQVRSRGGDPLIGAYHYLDLTPKGRNETGRGNLSDWVRLHDEYEDSNTRS GDRGH
Sequences:
>Translated_245_residues MTIPRIVDLDAWTEAHRAHLLKEKAFMRQRDALAAERRALPWLRVEKDYLFQAPQGSVSLGGLFQGRSQLIVYHFMMAPG DPHRCPGCSFLCDHIDGANQHLAHHDVSLVAVSRAPLAEIVPFKTRMGWAFDWVSSYGSDFNFDFQVSFSDEQIATGQAI YNFAPLRRGSHELPGLTVFTRDAAGDIFCTFQVRSRGGDPLIGAYHYLDLTPKGRNETGRGNLSDWVRLHDEYEDSNTRS GDRGH >Mature_244_residues TIPRIVDLDAWTEAHRAHLLKEKAFMRQRDALAAERRALPWLRVEKDYLFQAPQGSVSLGGLFQGRSQLIVYHFMMAPGD PHRCPGCSFLCDHIDGANQHLAHHDVSLVAVSRAPLAEIVPFKTRMGWAFDWVSSYGSDFNFDFQVSFSDEQIATGQAIY NFAPLRRGSHELPGLTVFTRDAAGDIFCTFQVRSRGGDPLIGAYHYLDLTPKGRNETGRGNLSDWVRLHDEYEDSNTRSG DRGH
Specific function: Unknown
COG id: COG4312
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27621; Mature: 27490
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00028 ZINC_FINGER_C2H2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIPRIVDLDAWTEAHRAHLLKEKAFMRQRDALAAERRALPWLRVEKDYLFQAPQGSVSL CCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHEEECCCCCEEE GGLFQGRSQLIVYHFMMAPGDPHRCPGCSFLCDHIDGANQHLAHHDVSLVAVSRAPLAEI CEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHCCEEEEEECCCCHHHH VPFKTRMGWAFDWVSSYGSDFNFDFQVSFSDEQIATGQAIYNFAPLRRGSHELPGLTVFT CCCHHHCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCEEEEE RDAAGDIFCTFQVRSRGGDPLIGAYHYLDLTPKGRNETGRGNLSDWVRLHDEYEDSNTRS ECCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC GDRGH CCCCC >Mature Secondary Structure TIPRIVDLDAWTEAHRAHLLKEKAFMRQRDALAAERRALPWLRVEKDYLFQAPQGSVSL CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHEEECCCCCEEE GGLFQGRSQLIVYHFMMAPGDPHRCPGCSFLCDHIDGANQHLAHHDVSLVAVSRAPLAEI CEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHCCEEEEEECCCCHHHH VPFKTRMGWAFDWVSSYGSDFNFDFQVSFSDEQIATGQAIYNFAPLRRGSHELPGLTVFT CCCHHHCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCEEEEE RDAAGDIFCTFQVRSRGGDPLIGAYHYLDLTPKGRNETGRGNLSDWVRLHDEYEDSNTRS ECCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC GDRGH CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA