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The map label for this gene is deoB

Identifier: 146339116

GI number: 146339116

Start: 2207636

End: 2208859

Strand: Reverse

Name: deoB

Synonym: BRADO2070

Alternate gene names: 146339116

Gene position: 2208859-2207636 (Counterclockwise)

Preceding gene: 146339117

Following gene: 146339115

Centisome position: 29.62

GC content: 66.26

Gene sequence:

>1224_bases
ATGCGCGCCTTGATCGTGGTGATGGACTCTGTCGGCATCGGCGGCGCGCCGGACGCGGCCGGTTACGGCGACGAGGGCGC
GGACACCGTCGGCCACATCGCCGAGGCCTGCGCGGCCGGCCAAGCGGACAGCGATCAGCGCCAGGGACCGTTACAGCTGC
CCCATCTCGCTGCGCTGGGGCTCGGCGAGGCCTGCGAACATGCGACCGGCCGGCGGCCGCCAGGCCTGCAGCAAAAAGCC
GGCGCAGGTGCCGCGTTCGGTTGCGCCAGTGAACGGTCGCGCGGCAAGGACACGCCATCGGGACATTGGGAAATCGCCGG
CGTGCCCGTTCCCTTCGAGTGGGGCTATTTCCCGAAGACCGTTCCCGCCTTTCCGCCCGACCTGATCGACCAGCTCTGCG
CGTCGGCCGGACTGACGGGCATCCTCGGTAACCGGCATGCCTCGGGCACCGACATCATTTCCGATCTGGGCGAGGCTCAT
CTGCAGACGGGGCAACCCATCTGCTATACGTCCGCCGATTCCGTGTTCCAGATCGCGGCGCATGAAGAGGCGTTCGGTCT
CGATCGGCTCTATCGACTGTGCGAGGCGACACGGCCGCTGGTCGATCGCTTCAACATCGGTCGCGTGATCGCGCGCCCCT
TCGTCGGACGTTCAGCCTCCGGTTTCAGGCGGACGGCGAATCGCCGCGATTACGCCGTGCCGCCCCCTGAACCCACGATC
CTCGATCTTGCCACCGCAGAGCGGCGCCACGTTGTCACGATTGGAAAGATCGCCGACATCTTTGCGCATCGCGGCACTGG
CCACAATCTCAAGGGCGACAGCAACGACACGCTGTTCACGCGCATGCTTGAGGGTCTCGATGCGCTCGACGACGGCGGCC
TGCTGTTCGCCAACTTCATCGACTTCGATACGCTCTACGGCCATCGCCGTGATGTCGCCGGCTATGCCTCCGCGCTCGAA
GCGTTCGATGCGCGACTTCCCGAGCTGTTGGACGCGCTGCGCGACGACGATCTCCTCGTCATCACGGCCGACCACGGCTG
CGATCCAAGCTGGAGCGGCTCCGACCACACAAGGGAGCGCGTTCCCGTGCTGATTGTCAATGGTCGGAGCGCTGGATCGA
TCGGAGCGCGCACGAGCTTCGCAGACACGGGCGCCACTATCGCTCAGCATCTGCAGCTGCCGCCCACGCGTCATGGAAAC
TCGTTCTGGCCGAACGGCGCCTGA

Upstream 100 bases:

>100_bases
ACGTCAACGAGTTCGCCGATTTCTGCGCCGGCATGATCCTGCGCTATTGTGCGACGACCGGCGCGGCCGCTCCGCCCCCT
GCGGTTCCGGAGTCGCTGCC

Downstream 100 bases:

>100_bases
TGTACATTATTGATGTAGGTTAGAGAAATTATTGTTTGTACGTGACGTAGGAACCAACATTCATTGCGCCGCTTCTCACA
CGGAGACGTCGTTCCAAATT

Product: phosphopentomutase

Products: NA

Alternate protein names: Phosphodeoxyribomutase

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MRALIVVMDSVGIGGAPDAAGYGDEGADTVGHIAEACAAGQADSDQRQGPLQLPHLAALGLGEACEHATGRRPPGLQQKA
GAGAAFGCASERSRGKDTPSGHWEIAGVPVPFEWGYFPKTVPAFPPDLIDQLCASAGLTGILGNRHASGTDIISDLGEAH
LQTGQPICYTSADSVFQIAAHEEAFGLDRLYRLCEATRPLVDRFNIGRVIARPFVGRSASGFRRTANRRDYAVPPPEPTI
LDLATAERRHVVTIGKIADIFAHRGTGHNLKGDSNDTLFTRMLEGLDALDDGGLLFANFIDFDTLYGHRRDVAGYASALE
AFDARLPELLDALRDDDLLVITADHGCDPSWSGSDHTRERVPVLIVNGRSAGSIGARTSFADTGATIAQHLQLPPTRHGN
SFWPNGA

Sequences:

>Translated_407_residues
MRALIVVMDSVGIGGAPDAAGYGDEGADTVGHIAEACAAGQADSDQRQGPLQLPHLAALGLGEACEHATGRRPPGLQQKA
GAGAAFGCASERSRGKDTPSGHWEIAGVPVPFEWGYFPKTVPAFPPDLIDQLCASAGLTGILGNRHASGTDIISDLGEAH
LQTGQPICYTSADSVFQIAAHEEAFGLDRLYRLCEATRPLVDRFNIGRVIARPFVGRSASGFRRTANRRDYAVPPPEPTI
LDLATAERRHVVTIGKIADIFAHRGTGHNLKGDSNDTLFTRMLEGLDALDDGGLLFANFIDFDTLYGHRRDVAGYASALE
AFDARLPELLDALRDDDLLVITADHGCDPSWSGSDHTRERVPVLIVNGRSAGSIGARTSFADTGATIAQHLQLPPTRHGN
SFWPNGA
>Mature_407_residues
MRALIVVMDSVGIGGAPDAAGYGDEGADTVGHIAEACAAGQADSDQRQGPLQLPHLAALGLGEACEHATGRRPPGLQQKA
GAGAAFGCASERSRGKDTPSGHWEIAGVPVPFEWGYFPKTVPAFPPDLIDQLCASAGLTGILGNRHASGTDIISDLGEAH
LQTGQPICYTSADSVFQIAAHEEAFGLDRLYRLCEATRPLVDRFNIGRVIARPFVGRSASGFRRTANRRDYAVPPPEPTI
LDLATAERRHVVTIGKIADIFAHRGTGHNLKGDSNDTLFTRMLEGLDALDDGGLLFANFIDFDTLYGHRRDVAGYASALE
AFDARLPELLDALRDDDLLVITADHGCDPSWSGSDHTRERVPVLIVNGRSAGSIGARTSFADTGATIAQHLQLPPTRHGN
SFWPNGA

Specific function: Phosphotransfer between the C1 and C5 carbon atoms of pentose

COG id: COG1015

COG function: function code G; Phosphopentomutase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphopentomutase family

Homologues:

Organism=Escherichia coli, GI1790843, Length=406, Percent_Identity=54.1871921182266, Blast_Score=440, Evalue=1e-124,
Organism=Escherichia coli, GI1789781, Length=436, Percent_Identity=30.7339449541284, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOB_BRASO (A4YPV1)

Other databases:

- EMBL:   CU234118
- RefSeq:   YP_001204164.1
- ProteinModelPortal:   A4YPV1
- SMR:   A4YPV1
- STRING:   A4YPV1
- GeneID:   5116394
- GenomeReviews:   CU234118_GR
- KEGG:   bra:BRADO2070
- eggNOG:   COG1015
- HOGENOM:   HBG644230
- OMA:   CHASGTE
- BioCyc:   BSP376:BRADO2070-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00740
- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR010045
- InterPro:   IPR006124
- Gene3D:   G3DSA:3.40.720.10
- PIRSF:   PIRSF001491
- TIGRFAMs:   TIGR01696

Pfam domain/function: PF01676 Metalloenzyme; SSF53649 Alkaline_phosphatase_core

EC number: =5.4.2.7

Molecular weight: Translated: 43213; Mature: 43213

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALIVVMDSVGIGGAPDAAGYGDEGADTVGHIAEACAAGQADSDQRQGPLQLPHLAALG
CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHC
LGEACEHATGRRPPGLQQKAGAGAAFGCASERSRGKDTPSGHWEIAGVPVPFEWGYFPKT
CCHHHHHHCCCCCCCCCHHCCCCCEECCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCC
VPAFPPDLIDQLCASAGLTGILGNRHASGTDIISDLGEAHLQTGQPICYTSADSVFQIAA
CCCCCHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEHH
HEEAFGLDRLYRLCEATRPLVDRFNIGRVIARPFVGRSASGFRRTANRRDYAVPPPEPTI
HHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCE
LDLATAERRHVVTIGKIADIFAHRGTGHNLKGDSNDTLFTRMLEGLDALDDGGLLFANFI
EEECCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEHHH
DFDTLYGHRRDVAGYASALEAFDARLPELLDALRDDDLLVITADHGCDPSWSGSDHTRER
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC
VPVLIVNGRSAGSIGARTSFADTGATIAQHLQLPPTRHGNSFWPNGA
CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRALIVVMDSVGIGGAPDAAGYGDEGADTVGHIAEACAAGQADSDQRQGPLQLPHLAALG
CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHC
LGEACEHATGRRPPGLQQKAGAGAAFGCASERSRGKDTPSGHWEIAGVPVPFEWGYFPKT
CCHHHHHHCCCCCCCCCHHCCCCCEECCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCCC
VPAFPPDLIDQLCASAGLTGILGNRHASGTDIISDLGEAHLQTGQPICYTSADSVFQIAA
CCCCCHHHHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEHH
HEEAFGLDRLYRLCEATRPLVDRFNIGRVIARPFVGRSASGFRRTANRRDYAVPPPEPTI
HHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCE
LDLATAERRHVVTIGKIADIFAHRGTGHNLKGDSNDTLFTRMLEGLDALDDGGLLFANFI
EEECCCCCCEEEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEHHH
DFDTLYGHRRDVAGYASALEAFDARLPELLDALRDDDLLVITADHGCDPSWSGSDHTRER
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCC
VPVLIVNGRSAGSIGARTSFADTGATIAQHLQLPPTRHGNSFWPNGA
CCEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA