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The map label for this gene is nudF [H]

Identifier: 146339098

GI number: 146339098

Start: 2187731

End: 2188159

Strand: Reverse

Name: nudF [H]

Synonym: BRADO2052

Alternate gene names: 146339098

Gene position: 2188159-2187731 (Counterclockwise)

Preceding gene: 146339099

Following gene: 146339097

Centisome position: 29.35

GC content: 70.4

Gene sequence:

>429_bases
ATGACCGATCCCACACCACGCCATCCCCAGCTCGCCGTGAGCGCCGCCATCTTCCGCGATGGCGAAATCCTCCTGGTGCG
CCGGGCGCGGTCGCCGGCCAGGGGCGTCTACACCCTGCCCGGCGGCAGGGTCGAGTTCGGCGAGGATCTGCACACGGCGG
TCGCGCGCGAGGTGACGGAGGAGACCGGTCTTTCGATCGCCATCATCGGCCTCGCCGGCTGGCGCGAGATATTGCCGGCC
AGCCAGGGCGGCAAGGGCGGCGACGGCCATTATGTGATCCTCCCTTTCGCCGCACGCTGGCAGGCGGGCGAGCCCACGCT
CAACGACGAGCTCGACGATGCGCAATGGCGGCATCCCGATGCGCTGGACGGCCTGACACTCACCGACGGCCTGCCGGACA
TCATCGCCGCCGCCCGCCGGCTCCTTTAG

Upstream 100 bases:

>100_bases
GGTCGACGCCGTCGATGCCATCATGGCAAGCTTCTGAGCCGGCTGCCATCGCCGCGGTCTCCACGTTACAGTGCGGGCCA
CGCCTGGAGTCCCCGCTGCC

Downstream 100 bases:

>100_bases
CCGCCTTGCGTCCGCCATCCGGCAAAGGCATATGACGTCGGTGCGTCCGATCACCCCCACCCGCCTCCTCACAAGCCTCC
TGGCTGGCGTCATGCTCGTG

Product: putative Nudix hydrolase family protein ADP-ribose pyrophosphatase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MTDPTPRHPQLAVSAAIFRDGEILLVRRARSPARGVYTLPGGRVEFGEDLHTAVAREVTEETGLSIAIIGLAGWREILPA
SQGGKGGDGHYVILPFAARWQAGEPTLNDELDDAQWRHPDALDGLTLTDGLPDIIAAARRLL

Sequences:

>Translated_142_residues
MTDPTPRHPQLAVSAAIFRDGEILLVRRARSPARGVYTLPGGRVEFGEDLHTAVAREVTEETGLSIAIIGLAGWREILPA
SQGGKGGDGHYVILPFAARWQAGEPTLNDELDDAQWRHPDALDGLTLTDGLPDIIAAARRLL
>Mature_141_residues
TDPTPRHPQLAVSAAIFRDGEILLVRRARSPARGVYTLPGGRVEFGEDLHTAVAREVTEETGLSIAIIGLAGWREILPAS
QGGKGGDGHYVILPFAARWQAGEPTLNDELDDAQWRHPDALDGLTLTDGLPDIIAAARRLL

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 15295; Mature: 15164

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPTPRHPQLAVSAAIFRDGEILLVRRARSPARGVYTLPGGRVEFGEDLHTAVAREVTE
CCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCEEECCCCCEECCHHHHHHHHHHHHH
ETGLSIAIIGLAGWREILPASQGGKGGDGHYVILPFAARWQAGEPTLNDELDDAQWRHPD
HCCCEEEEEECCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
ALDGLTLTDGLPDIIAAARRLL
CCCCEECCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TDPTPRHPQLAVSAAIFRDGEILLVRRARSPARGVYTLPGGRVEFGEDLHTAVAREVTE
CCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCEEECCCCCEECCHHHHHHHHHHHHH
ETGLSIAIIGLAGWREILPASQGGKGGDGHYVILPFAARWQAGEPTLNDELDDAQWRHPD
HCCCEEEEEECCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
ALDGLTLTDGLPDIIAAARRLL
CCCCEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]