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The map label for this gene is 146339065

Identifier: 146339065

GI number: 146339065

Start: 2148493

End: 2149314

Strand: Reverse

Name: 146339065

Synonym: BRADO2019

Alternate gene names: NA

Gene position: 2149314-2148493 (Counterclockwise)

Preceding gene: 146339069

Following gene: 146339061

Centisome position: 28.82

GC content: 72.14

Gene sequence:

>822_bases
ATGATGAATCCCGAGCCCCTCCCCGACGTCCGGCAGCTGCTCGCCTTCTATCTGGAGGCCGGGGTCGATTGCGCGCTCGC
CGATGATCCGATCAACCGGCTGGTGGAGCCGGACGCGGCGCCGGCGCCCGTCGCCGCTGCCGCCCGCCAGGCCGCGCCGC
AGCCGGGCCGGTCGCCCGCACCCGCGATCATTTCGCCGCGCGGAGAACCGCCGCCCGCGCCCGACGCTGCCATCGCCTCG
GCGCGCGAGTCGGCCCGGACGGCGCCGACGCTGCAGGCGCTCCGCGAGCTCCTGGAGACGTTCGACGGCTGCGCGCTGAA
ACAGACGGCGTCGCGGCTGGTGTTCGCCGACGGCAACCCGGAGGCGCGCGTCATGCTGGTGGGCGAGGCGCCGGGGCGCG
ACGAGGACATCGAGGGGCTGCCCTTCGTCGGCCGCTCGGGAAAACTGCTCGACCGCATGATCGGCGCCATCGGGCTCGAT
CGCACGAAGGTCTACATCGCCAACGTCATCCCGTGGCGGCCGCCGGGCAACCGCACGCCGACTCCGCAGGAGACGCAGAT
CTGCCTGCCCTTCATCCGACGCCAGATCGAGCTGGTCGATCCCGACGTGCTGGTGACGCTCGGCAACCCCTCGACCCAGG
CGCTGCTCGGCACCACCGAGGGCATCATGCGCACGCGCGGCAAGTGGCGCGACTACGACACCGGCAAGCGCACCATCCGC
GCGATCGCGACCTTCCACCCGGCCTATCTGCTGCGCTCGCCCTCCTACAAGCGGCTGTCCTGGCAGGATCTGCGCGCGAT
CGCAACGGTGCTCGCGGTCTAG

Upstream 100 bases:

>100_bases
GTTATTCCAAGCTCTTGTTTCCGATTTTTCGGGGCAGGACAACCACGTAAATGCATTCCGCCATGCGCCGGGGCGGCGTA
CACTGTCGCCGCGATCGAAC

Downstream 100 bases:

>100_bases
ACGCCCGGCCTCCGTCATTGCGAACGAAGCGGCGAAGCGAAGCAATCCAGAGTGGTGGGCGGGACTCTGGATTGCTTCGT
CGCTTCGCTCCTCGCAAGGA

Product: putative DNA polymerases

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; Uracil DNA Glycosylase Superfamily Protein; DNA Polymerase-Related Protein; DNA Glycosylase; Uracil-DNA Glycosylase Family 4 Protein; DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase; Bacteriophage-Related DNA Polymerase; N-Terminus Of Bacteriophage-Type DNA Polymerase; Uracil-DNA Glycosylase C-Terminal Domain Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; DNA Polymerase Bacteriophage-Type Protein; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Phage Related DNA Polymerase; Uracil-DNA Glycosylase C-Terminal; Phage SpO1 DNA Polymerase-Related Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Uracil-DNA Glycosylase Phage-Related Protein; Phage Shock Protein E; Phage DNA Polymerase; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MMNPEPLPDVRQLLAFYLEAGVDCALADDPINRLVEPDAAPAPVAAAARQAAPQPGRSPAPAIISPRGEPPPAPDAAIAS
ARESARTAPTLQALRELLETFDGCALKQTASRLVFADGNPEARVMLVGEAPGRDEDIEGLPFVGRSGKLLDRMIGAIGLD
RTKVYIANVIPWRPPGNRTPTPQETQICLPFIRRQIELVDPDVLVTLGNPSTQALLGTTEGIMRTRGKWRDYDTGKRTIR
AIATFHPAYLLRSPSYKRLSWQDLRAIATVLAV

Sequences:

>Translated_273_residues
MMNPEPLPDVRQLLAFYLEAGVDCALADDPINRLVEPDAAPAPVAAAARQAAPQPGRSPAPAIISPRGEPPPAPDAAIAS
ARESARTAPTLQALRELLETFDGCALKQTASRLVFADGNPEARVMLVGEAPGRDEDIEGLPFVGRSGKLLDRMIGAIGLD
RTKVYIANVIPWRPPGNRTPTPQETQICLPFIRRQIELVDPDVLVTLGNPSTQALLGTTEGIMRTRGKWRDYDTGKRTIR
AIATFHPAYLLRSPSYKRLSWQDLRAIATVLAV
>Mature_273_residues
MMNPEPLPDVRQLLAFYLEAGVDCALADDPINRLVEPDAAPAPVAAAARQAAPQPGRSPAPAIISPRGEPPPAPDAAIAS
ARESARTAPTLQALRELLETFDGCALKQTASRLVFADGNPEARVMLVGEAPGRDEDIEGLPFVGRSGKLLDRMIGAIGLD
RTKVYIANVIPWRPPGNRTPTPQETQICLPFIRRQIELVDPDVLVTLGNPSTQALLGTTEGIMRTRGKWRDYDTGKRTIR
AIATFHPAYLLRSPSYKRLSWQDLRAIATVLAV

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 29564; Mature: 29564

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNPEPLPDVRQLLAFYLEAGVDCALADDPINRLVEPDAAPAPVAAAARQAAPQPGRSPA
CCCCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC
PAIISPRGEPPPAPDAAIASARESARTAPTLQALRELLETFDGCALKQTASRLVFADGNP
CCEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCEEEEECCCC
EARVMLVGEAPGRDEDIEGLPFVGRSGKLLDRMIGAIGLDRTKVYIANVIPWRPPGNRTP
CEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
TPQETQICLPFIRRQIELVDPDVLVTLGNPSTQALLGTTEGIMRTRGKWRDYDTGKRTIR
CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
AIATFHPAYLLRSPSYKRLSWQDLRAIATVLAV
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MMNPEPLPDVRQLLAFYLEAGVDCALADDPINRLVEPDAAPAPVAAAARQAAPQPGRSPA
CCCCCCCHHHHHHHHHHHHHCCCEEECCCHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCC
PAIISPRGEPPPAPDAAIASARESARTAPTLQALRELLETFDGCALKQTASRLVFADGNP
CCEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHCEEEEECCCC
EARVMLVGEAPGRDEDIEGLPFVGRSGKLLDRMIGAIGLDRTKVYIANVIPWRPPGNRTP
CEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
TPQETQICLPFIRRQIELVDPDVLVTLGNPSTQALLGTTEGIMRTRGKWRDYDTGKRTIR
CCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
AIATFHPAYLLRSPSYKRLSWQDLRAIATVLAV
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA