| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146339048
Identifier: 146339048
GI number: 146339048
Start: 2127135
End: 2127815
Strand: Reverse
Name: 146339048
Synonym: BRADO2001
Alternate gene names: NA
Gene position: 2127815-2127135 (Counterclockwise)
Preceding gene: 146339049
Following gene: 146339047
Centisome position: 28.54
GC content: 63.14
Gene sequence:
>681_bases ATGCGCCCATTCCGGAGCAGAGCCTTGATCATTACCCGCCGCGCCTTCACCGCCGCCTTGTCGCTGACCGGCCTCGCCGC GCTGGCCGGCTTCTCGCCGCTGCGGCTGATCTCGGAGGCCTTCGCGCAGAGCGCCGCCGACGTCGCCAAGCCGCAGTCGC TGCCCGACATGGCGATCGGGCCGACCGACGCTGCCGTCACCATCACCGAATACGCCTCGATGACTTGTCCGCATTGCGCG GCGTTCAACGCGACCGTGTTCCCGAAGCTGAAGGCCGAATACATCGATACCGGCAAGGTGCGCTACATCTTCCGCGAGTT CCCGCTCGACATCAAGGCCGCCGCCGGCTCGATGCTGACGCGCTGCATCGCCAAGGACGACGCGCAGAAGTATTTCGCCG TCACCGACATGCTGTTCCGCTCGCAGAACGACTGGGTGGTCAAGAACACCACCGAGACCCTGACCCGGATCGGCAAGCAG GCCGGCCTCAGCCAGCAGCAGGTCGAGGCCTGCCTAAAGGACCAGGCTCTGCTCGACAAGATCGCCGCCGATCAGAAGTA CGCCAGCGACGTTCTTAAAGTTGATTCGACGCCGACCTTCTTCATCAACGGCGAGAAGATCAAAGGCGAATCCTCGATCG AGGAGTTTCAGAAGCGCATCAACCCGCTTCTGAAGAGCTGA
Upstream 100 bases:
>100_bases AATTGACGTTCGCCGTTTGATCCGGGGTTGAGGCGCGGCATTGCCTCAGACTGGGTTTCAAGCTAGCGAAAAGCCAAGTT GAGAGCGTTTCAGGCGCGAG
Downstream 100 bases:
>100_bases TCCGAATCACTGAGTCAAACGAGACACAGTGCGGCCCCTTCGTGGGGTCGCTTCTGTTTGGTGGCTGATTCGGTCGAGAA AGCCTTGGAAAAGCGGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MRPFRSRALIITRRAFTAALSLTGLAALAGFSPLRLISEAFAQSAADVAKPQSLPDMAIGPTDAAVTITEYASMTCPHCA AFNATVFPKLKAEYIDTGKVRYIFREFPLDIKAAAGSMLTRCIAKDDAQKYFAVTDMLFRSQNDWVVKNTTETLTRIGKQ AGLSQQQVEACLKDQALLDKIAADQKYASDVLKVDSTPTFFINGEKIKGESSIEEFQKRINPLLKS
Sequences:
>Translated_226_residues MRPFRSRALIITRRAFTAALSLTGLAALAGFSPLRLISEAFAQSAADVAKPQSLPDMAIGPTDAAVTITEYASMTCPHCA AFNATVFPKLKAEYIDTGKVRYIFREFPLDIKAAAGSMLTRCIAKDDAQKYFAVTDMLFRSQNDWVVKNTTETLTRIGKQ AGLSQQQVEACLKDQALLDKIAADQKYASDVLKVDSTPTFFINGEKIKGESSIEEFQKRINPLLKS >Mature_226_residues MRPFRSRALIITRRAFTAALSLTGLAALAGFSPLRLISEAFAQSAADVAKPQSLPDMAIGPTDAAVTITEYASMTCPHCA AFNATVFPKLKAEYIDTGKVRYIFREFPLDIKAAAGSMLTRCIAKDDAQKYFAVTDMLFRSQNDWVVKNTTETLTRIGKQ AGLSQQQVEACLKDQALLDKIAADQKYASDVLKVDSTPTFFINGEKIKGESSIEEFQKRINPLLKS
Specific function: May be required for disulfide bond formation in some proteins [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR012335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24811; Mature: 24811
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPFRSRALIITRRAFTAALSLTGLAALAGFSPLRLISEAFAQSAADVAKPQSLPDMAIG CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC PTDAAVTITEYASMTCPHCAAFNATVFPKLKAEYIDTGKVRYIFREFPLDIKAAAGSMLT CCCCEEEHHHHHHCCCCCHHHCCCCCCCCHHHHHCCCCHHEEHHHHCCCCHHHHHHHHHH RCIAKDDAQKYFAVTDMLFRSQNDWVVKNTTETLTRIGKQAGLSQQQVEACLKDQALLDK HHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IAADQKYASDVLKVDSTPTFFINGEKIKGESSIEEFQKRINPLLKS HHHHHHHHHHHHCCCCCCEEEEECCEECCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRPFRSRALIITRRAFTAALSLTGLAALAGFSPLRLISEAFAQSAADVAKPQSLPDMAIG CCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC PTDAAVTITEYASMTCPHCAAFNATVFPKLKAEYIDTGKVRYIFREFPLDIKAAAGSMLT CCCCEEEHHHHHHCCCCCHHHCCCCCCCCHHHHHCCCCHHEEHHHHCCCCHHHHHHHHHH RCIAKDDAQKYFAVTDMLFRSQNDWVVKNTTETLTRIGKQAGLSQQQVEACLKDQALLDK HHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH IAADQKYASDVLKVDSTPTFFINGEKIKGESSIEEFQKRINPLLKS HHHHHHHHHHHHCCCCCCEEEEECCEECCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA