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The map label for this gene is ygcF [C]

Identifier: 146339025

GI number: 146339025

Start: 2100362

End: 2100994

Strand: Reverse

Name: ygcF [C]

Synonym: BRADO1974

Alternate gene names: 146339025

Gene position: 2100994-2100362 (Counterclockwise)

Preceding gene: 146339026

Following gene: 146339024

Centisome position: 28.18

GC content: 66.98

Gene sequence:

>633_bases
GTGAGCTACGCGGTCAAGGAAATCTTCATGACCCTGCAGGGCGAAGGCGCCCAGGCGGGGCGTGCCGCCGTGTTCTGCCG
CTTCGCCGGCTGCAATCTGTGGAGCGGACGCGAGGCCGATCGCGCCACCGCGACGTGCCGGTTCTGCGACACCGATTTCG
TCGGTGTCGACGGCACGCTGGGCGGCCGTTATGAAACGGCGGCGGCCTTGGCCGAGGCCATCGCAGGGCAATGGACAGGC
GGCGCGGCCGACCGCTATACGATCCTCACCGGCGGCGAGCCGCTGCTGCAGGTCGATGCCGACCTGATCGCGGCGCTCCA
TGCACAGGGCTTTGCCGTCGGCATCGAGACCAACGGCACGCTCATTCCGCCTGATGGCATCGACTGGATCTGCGTCAGTC
CCAAAGCGGGGGCCGAACTGAAGCTGCGGCACGGCCATGAGCTGAAGCTGGTCTATCCGCAAGCGGGCACCGAGCCGGAC
AAGTTCGAAGGGCTCGCCTTCGAGCGGTTCTCGCTGCAGCCGATGGACGGGCCTGACGCGGCCGCCAACACGGCGCGCGC
CATTCACTATTGCCAGCGTCGTCCGCAATGGCGGCTCAGCCTGCAGACGCACAAGATGATCGGCATCAGATAG

Upstream 100 bases:

>100_bases
GCTCGCTGAACGTGGCGATCGCATCGGCCATGGCCGCCGGAGAGGCGCTGCGCCAGGTTGGACATTTCGTCCAATTGCAA
TCTGCGGAAGGAGCGCGGGA

Downstream 100 bases:

>100_bases
GGATCGTTGACCAAGCGATGTGGGAATTGACCAAGTCGTTTACCTTCGAGGCCGCGCATGCGCTGGCGCATACGACGCTG
GGCGAGGTGAGCCAGGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Radical Activating; Organic Radical Activating; Radical SAM Domain Protein; Organic Radical Activating-Like Protein; Organic Radical Activating Protein; Queuosine Biosynthesis Protein QueE; NrdG Protein; Radical Sam Domain Protein; Organic Radical Activating Protein; Radical SAM; Anaerobic Ribonucleotide Reductase Activating Protein NrdG; GntS Family Protein; Radical SAM Superfamily

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSYAVKEIFMTLQGEGAQAGRAAVFCRFAGCNLWSGREADRATATCRFCDTDFVGVDGTLGGRYETAAALAEAIAGQWTG
GAADRYTILTGGEPLLQVDADLIAALHAQGFAVGIETNGTLIPPDGIDWICVSPKAGAELKLRHGHELKLVYPQAGTEPD
KFEGLAFERFSLQPMDGPDAAANTARAIHYCQRRPQWRLSLQTHKMIGIR

Sequences:

>Translated_210_residues
MSYAVKEIFMTLQGEGAQAGRAAVFCRFAGCNLWSGREADRATATCRFCDTDFVGVDGTLGGRYETAAALAEAIAGQWTG
GAADRYTILTGGEPLLQVDADLIAALHAQGFAVGIETNGTLIPPDGIDWICVSPKAGAELKLRHGHELKLVYPQAGTEPD
KFEGLAFERFSLQPMDGPDAAANTARAIHYCQRRPQWRLSLQTHKMIGIR
>Mature_209_residues
SYAVKEIFMTLQGEGAQAGRAAVFCRFAGCNLWSGREADRATATCRFCDTDFVGVDGTLGGRYETAAALAEAIAGQWTGG
AADRYTILTGGEPLLQVDADLIAALHAQGFAVGIETNGTLIPPDGIDWICVSPKAGAELKLRHGHELKLVYPQAGTEPDK
FEGLAFERFSLQPMDGPDAAANTARAIHYCQRRPQWRLSLQTHKMIGIR

Specific function: Unknown

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22615; Mature: 22484

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYAVKEIFMTLQGEGAQAGRAAVFCRFAGCNLWSGREADRATATCRFCDTDFVGVDGTL
CCHHHEEHHEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCC
GGRYETAAALAEAIAGQWTGGAADRYTILTGGEPLLQVDADLIAALHAQGFAVGIETNGT
CCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECHHHHHHHHCCCEEEEEECCCE
LIPPDGIDWICVSPKAGAELKLRHGHELKLVYPQAGTEPDKFEGLAFERFSLQPMDGPDA
EECCCCCCEEEECCCCCCEEEEECCCEEEEECCCCCCCCCHHCCEEEEEEECCCCCCCCH
AANTARAIHYCQRRPQWRLSLQTHKMIGIR
HHHHHHHHHHHHCCCCEEEEEEEEEEECCC
>Mature Secondary Structure 
SYAVKEIFMTLQGEGAQAGRAAVFCRFAGCNLWSGREADRATATCRFCDTDFVGVDGTL
CHHHEEHHEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEECCCCC
GGRYETAAALAEAIAGQWTGGAADRYTILTGGEPLLQVDADLIAALHAQGFAVGIETNGT
CCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEECHHHHHHHHCCCEEEEEECCCE
LIPPDGIDWICVSPKAGAELKLRHGHELKLVYPQAGTEPDKFEGLAFERFSLQPMDGPDA
EECCCCCCEEEECCCCCCEEEEECCCEEEEECCCCCCCCCHHCCEEEEEEECCCCCCCCH
AANTARAIHYCQRRPQWRLSLQTHKMIGIR
HHHHHHHHHHHHCCCCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA