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The map label for this gene is yedQ [H]

Identifier: 146339021

GI number: 146339021

Start: 2096006

End: 2097952

Strand: Reverse

Name: yedQ [H]

Synonym: BRADO1970

Alternate gene names: 146339021

Gene position: 2097952-2096006 (Counterclockwise)

Preceding gene: 146339022

Following gene: 146339015

Centisome position: 28.14

GC content: 63.17

Gene sequence:

>1947_bases
ATGACCCTCCGCCTTTCGCAGAAGTCGCTGAGCGTTTCGATCAAATCGTCACTTCTGACCTCGGTCTTCCTGCTGCTCGT
CATCCTCGGCGGCATGTCGATCATGAGCAAGATGCGGCTGTCAGCGTTGCAGGAGACGATCGAGACCGTCGGTCGCGACA
GGCTGCCGAAGATCAGGGCGCTCGGAGAGCTCAACGTCGGGGTCGCGCGGATACGCACCGCGGCCGTCCGCATGGCGCTG
GCATCCACCACCGACCAACGAGCCGAGGTGGAGACGGTCATCACCCGTCGCGTCGACGATCTGAATCGCAAGATCGAGGC
GTTCAGGGACACGATCGAACCGAACTCGCCGATGAAGCTGGTGTTCGATCAGTTCGCCGCCAAATGGGCGCAATACGTCA
AGCAGCAGGCCAGGATTCTGGATCCCGAAATCGCCGCGGACCGCGCCACGGCGGCCAATATCGTCAACGTCGAGACGCCC
TTGTACTTCCAGGCCGTGGTCGATGCGATCGATGACGGCATCAAGCTCGCCGACCAGGAGGCCGACCACGCCATCGACAA
CGCGACCGCCGACAGCCACCTGTTCTCGATCGTGCTGTGGAGCGTCAACGCGATCAGCATCCTGATCGGCTTCGCCACGC
TGATTTTCGTGATCCGCGACGTGTCGACACCGATCCATCGCATCACCGAGAGCATGGAGCGCATCGCCAAGGGGCATCTT
GCCACCGAGATCCCCTATGCCGAGCACGCCAACGAACTCGGAATGATGGCGCGGGCGCTGGCGGTGTTCCGCAAGAGCCT
GGTCGAAAACGAACGGCTCAACGCCGCCACGCGCACGCTGTCAGAGCTGAGCGAATGGCTGCAATCGGCCAAGTCCGAGA
CTGAACTTTACGACATGATCTCCTCGGTGCTCGGGCGCCTGATGCCGGAATGCAAGGGCAGCCTCTACATCTACGCCAAT
TCGCGCGACGTGCTGGAAGTCGCCGCGCAATGGAACGGCGAGGCGCGCACCACGAGCATGCATCCGGAGGATTGCTGGAG
CCTGCGCCGCGGCCACTTCTACGTCCACGGCACCAGCGAAATCGAATTCCATTGCGATCATGTCCACAAGGACATCAACG
AGAATTACTGCTGCATTCCGATTCTGGCGCATGGCGATACGGTCGGCCTGCTGCACCTCGAATACACGTTCGACAGCAGC
GAGACCGCGGAGGAAGCCAAAGCGCGCTTCGCCGATCGCGTCCGCCTCGGCCTCGCCTGTGCCGAGCATCTGTCGATCGC
GATCGCCAACATGAAGCTACGCGAAGGGCTGCGTGACCAGTCTGTTCGCGACGTGCTGACAGGGCTGAACAATCGGCGCT
ATCTGCTGGAGACCGCGCGGCGTGAACTGCTGCGTGCGGCTCGCCACAAATCGCCGGTCAGCGTGGTGACGCTCGATGTT
GATCACTTCAAGACGTTCAACGACAATCACGGTCACGACGCCGGCGACACCGTGCTGCGCCATGTCGGCGAGATCCTGCG
AGCGACCTTTGCCGATGACGGCGTGCCCTGCCGCTTCGGCGGCGAGGAATTCGTCGTGCTGCTGCCGGGCGCCACGACCG
AGGAAGGCGGGGTCCGCGCCGAGGAGTTGAGGGCGAGAATCGAGTCGATGAAGATCCGCTATGCCGACAGCTATCTGCCG
CGGGTCACGATCTCGGCCGGCGTGGCGAGCTATCCCGACGCAGGCGGCAGCTTCATGGACATTCTGCGCGTGGCTGACGA
TGCGCTGTATCAGGCCAAGCAGAAGGGCCGCAACCGGGTCGAAGTCGCGGCAAGCGGCGAGATGTCGGCCATGATTGTCG
AGGAGATGGCGGACAAGGCCGTCGCGACGCTCGAGACGATCGTCCCCCGCGGCGAGAGCAGGCCTGCATCCGATCTCGGC
CGGGCGTCGGATCAGAAGGTGGCGTGA

Upstream 100 bases:

>100_bases
TTGATGGTCATTTCAATCATCGGCGGGCTTGTGGGGGAGTGCGCCGGTCCCTGAGCGCTGCTTCGACCGATGGGCAAGCC
GTCAATCGACAGTGGACGTC

Downstream 100 bases:

>100_bases
CGGCGGACGGGCGCCACTGCCGCTTCGACATTCTCGCCGGCCTCAGCGGCGAGCCGCGCGTGCACGCCGGTCGGCGTCAA
CAGGTGACGCGATCGGATCA

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 648; Mature: 647

Protein sequence:

>648_residues
MTLRLSQKSLSVSIKSSLLTSVFLLLVILGGMSIMSKMRLSALQETIETVGRDRLPKIRALGELNVGVARIRTAAVRMAL
ASTTDQRAEVETVITRRVDDLNRKIEAFRDTIEPNSPMKLVFDQFAAKWAQYVKQQARILDPEIAADRATAANIVNVETP
LYFQAVVDAIDDGIKLADQEADHAIDNATADSHLFSIVLWSVNAISILIGFATLIFVIRDVSTPIHRITESMERIAKGHL
ATEIPYAEHANELGMMARALAVFRKSLVENERLNAATRTLSELSEWLQSAKSETELYDMISSVLGRLMPECKGSLYIYAN
SRDVLEVAAQWNGEARTTSMHPEDCWSLRRGHFYVHGTSEIEFHCDHVHKDINENYCCIPILAHGDTVGLLHLEYTFDSS
ETAEEAKARFADRVRLGLACAEHLSIAIANMKLREGLRDQSVRDVLTGLNNRRYLLETARRELLRAARHKSPVSVVTLDV
DHFKTFNDNHGHDAGDTVLRHVGEILRATFADDGVPCRFGGEEFVVLLPGATTEEGGVRAEELRARIESMKIRYADSYLP
RVTISAGVASYPDAGGSFMDILRVADDALYQAKQKGRNRVEVAASGEMSAMIVEEMADKAVATLETIVPRGESRPASDLG
RASDQKVA

Sequences:

>Translated_648_residues
MTLRLSQKSLSVSIKSSLLTSVFLLLVILGGMSIMSKMRLSALQETIETVGRDRLPKIRALGELNVGVARIRTAAVRMAL
ASTTDQRAEVETVITRRVDDLNRKIEAFRDTIEPNSPMKLVFDQFAAKWAQYVKQQARILDPEIAADRATAANIVNVETP
LYFQAVVDAIDDGIKLADQEADHAIDNATADSHLFSIVLWSVNAISILIGFATLIFVIRDVSTPIHRITESMERIAKGHL
ATEIPYAEHANELGMMARALAVFRKSLVENERLNAATRTLSELSEWLQSAKSETELYDMISSVLGRLMPECKGSLYIYAN
SRDVLEVAAQWNGEARTTSMHPEDCWSLRRGHFYVHGTSEIEFHCDHVHKDINENYCCIPILAHGDTVGLLHLEYTFDSS
ETAEEAKARFADRVRLGLACAEHLSIAIANMKLREGLRDQSVRDVLTGLNNRRYLLETARRELLRAARHKSPVSVVTLDV
DHFKTFNDNHGHDAGDTVLRHVGEILRATFADDGVPCRFGGEEFVVLLPGATTEEGGVRAEELRARIESMKIRYADSYLP
RVTISAGVASYPDAGGSFMDILRVADDALYQAKQKGRNRVEVAASGEMSAMIVEEMADKAVATLETIVPRGESRPASDLG
RASDQKVA
>Mature_647_residues
TLRLSQKSLSVSIKSSLLTSVFLLLVILGGMSIMSKMRLSALQETIETVGRDRLPKIRALGELNVGVARIRTAAVRMALA
STTDQRAEVETVITRRVDDLNRKIEAFRDTIEPNSPMKLVFDQFAAKWAQYVKQQARILDPEIAADRATAANIVNVETPL
YFQAVVDAIDDGIKLADQEADHAIDNATADSHLFSIVLWSVNAISILIGFATLIFVIRDVSTPIHRITESMERIAKGHLA
TEIPYAEHANELGMMARALAVFRKSLVENERLNAATRTLSELSEWLQSAKSETELYDMISSVLGRLMPECKGSLYIYANS
RDVLEVAAQWNGEARTTSMHPEDCWSLRRGHFYVHGTSEIEFHCDHVHKDINENYCCIPILAHGDTVGLLHLEYTFDSSE
TAEEAKARFADRVRLGLACAEHLSIAIANMKLREGLRDQSVRDVLTGLNNRRYLLETARRELLRAARHKSPVSVVTLDVD
HFKTFNDNHGHDAGDTVLRHVGEILRATFADDGVPCRFGGEEFVVLLPGATTEEGGVRAEELRARIESMKIRYADSYLPR
VTISAGVASYPDAGGSFMDILRVADDALYQAKQKGRNRVEVAASGEMSAMIVEEMADKAVATLETIVPRGESRPASDLGR
ASDQKVA

Specific function: Involves in the regulation of cellulose production [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI87082007, Length=175, Percent_Identity=40.5714285714286, Blast_Score=121, Evalue=2e-28,
Organism=Escherichia coli, GI145693134, Length=159, Percent_Identity=38.3647798742138, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1787262, Length=161, Percent_Identity=37.888198757764, Blast_Score=105, Evalue=9e-24,
Organism=Escherichia coli, GI1786584, Length=170, Percent_Identity=38.8235294117647, Blast_Score=103, Evalue=4e-23,
Organism=Escherichia coli, GI1787802, Length=206, Percent_Identity=33.495145631068, Blast_Score=101, Evalue=2e-22,
Organism=Escherichia coli, GI87081881, Length=172, Percent_Identity=35.4651162790698, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787816, Length=166, Percent_Identity=35.5421686746988, Blast_Score=86, Evalue=7e-18,
Organism=Escherichia coli, GI1787541, Length=184, Percent_Identity=32.6086956521739, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1788381, Length=197, Percent_Identity=30.9644670050761, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1788085, Length=164, Percent_Identity=29.8780487804878, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI87081977, Length=214, Percent_Identity=31.7757009345794, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87081974, Length=176, Percent_Identity=22.1590909090909, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160 [H]

Pfam domain/function: PF00990 GGDEF [H]

EC number: NA

Molecular weight: Translated: 71775; Mature: 71643

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS50885 HAMP ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRLSQKSLSVSIKSSLLTSVFLLLVILGGMSIMSKMRLSALQETIETVGRDRLPKIRA
CEEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LGELNVGVARIRTAAVRMALASTTDQRAEVETVITRRVDDLNRKIEAFRDTIEPNSPMKL
HCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VFDQFAAKWAQYVKQQARILDPEIAADRATAANIVNVETPLYFQAVVDAIDDGIKLADQE
HHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHCCEEECCCCHHHHHHHHHHHCCHHHCCCH
ADHAIDNATADSHLFSIVLWSVNAISILIGFATLIFVIRDVSTPIHRITESMERIAKGHL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
ATEIPYAEHANELGMMARALAVFRKSLVENERLNAATRTLSELSEWLQSAKSETELYDMI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
SSVLGRLMPECKGSLYIYANSRDVLEVAAQWNGEARTTSMHPEDCWSLRRGHFYVHGTSE
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEECCC
IEFHCDHVHKDINENYCCIPILAHGDTVGLLHLEYTFDSSETAEEAKARFADRVRLGLAC
EEEEHHHHHHHCCCCEEEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
AEHLSIAIANMKLREGLRDQSVRDVLTGLNNRRYLLETARRELLRAARHKSPVSVVTLDV
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEH
DHFKTFNDNHGHDAGDTVLRHVGEILRATFADDGVPCRFGGEEFVVLLPGATTEEGGVRA
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCCCCCCH
EELRARIESMKIRYADSYLPRVTISAGVASYPDAGGSFMDILRVADDALYQAKQKGRNRV
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
EVAASGEMSAMIVEEMADKAVATLETIVPRGESRPASDLGRASDQKVA
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure 
TLRLSQKSLSVSIKSSLLTSVFLLLVILGGMSIMSKMRLSALQETIETVGRDRLPKIRA
EEEECCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
LGELNVGVARIRTAAVRMALASTTDQRAEVETVITRRVDDLNRKIEAFRDTIEPNSPMKL
HCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VFDQFAAKWAQYVKQQARILDPEIAADRATAANIVNVETPLYFQAVVDAIDDGIKLADQE
HHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHCCEEECCCCHHHHHHHHHHHCCHHHCCCH
ADHAIDNATADSHLFSIVLWSVNAISILIGFATLIFVIRDVSTPIHRITESMERIAKGHL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
ATEIPYAEHANELGMMARALAVFRKSLVENERLNAATRTLSELSEWLQSAKSETELYDMI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
SSVLGRLMPECKGSLYIYANSRDVLEVAAQWNGEARTTSMHPEDCWSLRRGHFYVHGTSE
HHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEEEEECCC
IEFHCDHVHKDINENYCCIPILAHGDTVGLLHLEYTFDSSETAEEAKARFADRVRLGLAC
EEEEHHHHHHHCCCCEEEEEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
AEHLSIAIANMKLREGLRDQSVRDVLTGLNNRRYLLETARRELLRAARHKSPVSVVTLDV
HHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEH
DHFKTFNDNHGHDAGDTVLRHVGEILRATFADDGVPCRFGGEEFVVLLPGATTEEGGVRA
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCCCCCCCH
EELRARIESMKIRYADSYLPRVTISAGVASYPDAGGSFMDILRVADDALYQAKQKGRNRV
HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEE
EVAASGEMSAMIVEEMADKAVATLETIVPRGESRPASDLGRASDQKVA
EEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA