| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146338774
Identifier: 146338774
GI number: 146338774
Start: 1823609
End: 1824106
Strand: Direct
Name: 146338774
Synonym: BRADO1708
Alternate gene names: NA
Gene position: 1823609-1824106 (Clockwise)
Preceding gene: 146338773
Following gene: 146338775
Centisome position: 24.46
GC content: 66.06
Gene sequence:
>498_bases TTGGGCTTCGTTCTCGTCTCGGCGTCGGTCGCGTCGGCGCAGTCCGCGGCTCCGTCCGATCCGACTGACGCCGGCAAGGC GGTGTTCAAGCGCGCGAACTGCGTCGGCTGCCACAAATGGCACGGCAATGGCGGTGGCGGCTATGGCGGCGACGCGCTGT CGCTGCGCAAGACCGAGCTGAGCCGCGAGCACATCATCGAAACCGTGACCTGCGGGCGGCCCGGCACGGGCATGCCGTAC TTTGCGCGCGGCTCCTATGACACGACCAAGTGCTACGGCATGAGCCGCCAGGAGGTCGGTGAGCGCATGCCGCCCGAGGG CGGCACCTTCCTGCGCCCCAACGATATCGAGGCGGTCGCAGACTACGTGCTCGCGCACATCAAGGGTCGCGGCGAGCCCA ATTATGATGAGTGCACGACCTTCTTCGGCAACACGTCGCGGGTCTGCGACATCTACAAGGCCAATGCGACCCAGCCTGCA AGCGAGCCATCGAAATGA
Upstream 100 bases:
>100_bases TAAGCAGATCAAGGAGCGGAGGCGTTGCCTCCGCTCCTTCCTTTTCCCCATTCGGCAAGTAGATCAGATGAAATTCAGTG CGATCACGTCCGCCTTGGCC
Downstream 100 bases:
>100_bases AACGCTCAACCTGCACTGCATTCTGCGTCACGTTCCTGCTGACAGCCGTGATGCCTGCGGCCTCCGCGCAGGCCGTGCCG AACTACGATCTGCGCGACAT
Product: putative cytochrome c region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MGFVLVSASVASAQSAAPSDPTDAGKAVFKRANCVGCHKWHGNGGGGYGGDALSLRKTELSREHIIETVTCGRPGTGMPY FARGSYDTTKCYGMSRQEVGERMPPEGGTFLRPNDIEAVADYVLAHIKGRGEPNYDECTTFFGNTSRVCDIYKANATQPA SEPSK
Sequences:
>Translated_165_residues MGFVLVSASVASAQSAAPSDPTDAGKAVFKRANCVGCHKWHGNGGGGYGGDALSLRKTELSREHIIETVTCGRPGTGMPY FARGSYDTTKCYGMSRQEVGERMPPEGGTFLRPNDIEAVADYVLAHIKGRGEPNYDECTTFFGNTSRVCDIYKANATQPA SEPSK >Mature_164_residues GFVLVSASVASAQSAAPSDPTDAGKAVFKRANCVGCHKWHGNGGGGYGGDALSLRKTELSREHIIETVTCGRPGTGMPYF ARGSYDTTKCYGMSRQEVGERMPPEGGTFLRPNDIEAVADYVLAHIKGRGEPNYDECTTFFGNTSRVCDIYKANATQPAS EPSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17591; Mature: 17460
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFVLVSASVASAQSAAPSDPTDAGKAVFKRANCVGCHKWHGNGGGGYGGDALSLRKTEL CCEEEEECCHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEHHHHHH SREHIIETVTCGRPGTGMPYFARGSYDTTKCYGMSRQEVGERMPPEGGTFLRPNDIEAVA HHHHHHHHHCCCCCCCCCCEEECCCCCCHHHCCCCHHHHHHCCCCCCCCEECCCCHHHHH DYVLAHIKGRGEPNYDECTTFFGNTSRVCDIYKANATQPASEPSK HHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure GFVLVSASVASAQSAAPSDPTDAGKAVFKRANCVGCHKWHGNGGGGYGGDALSLRKTEL CEEEEECCHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEEHHHHHH SREHIIETVTCGRPGTGMPYFARGSYDTTKCYGMSRQEVGERMPPEGGTFLRPNDIEAVA HHHHHHHHHCCCCCCCCCCEEECCCCCCHHHCCCCHHHHHHCCCCCCCCEECCCCHHHHH DYVLAHIKGRGEPNYDECTTFFGNTSRVCDIYKANATQPASEPSK HHHHHHHHCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA