| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is phoU [H]
Identifier: 146338744
GI number: 146338744
Start: 1794982
End: 1795698
Strand: Direct
Name: phoU [H]
Synonym: BRADO1678
Alternate gene names: 146338744
Gene position: 1794982-1795698 (Clockwise)
Preceding gene: 146338743
Following gene: 146338745
Centisome position: 24.07
GC content: 64.16
Gene sequence:
>717_bases ATGGCCAGTGAACATACCGCCAAGGCGTTCGACAGCGATCTGCAGGATCTGACCCGCCTGGTGGCGGAGATGGGCGGCCT TGCCGAACGGCTGATCGTCGATTCCGTCGACGCGCTGGTGCGGCGCGACGTGGCGCTCGGCCAGAAGGTGGTCGCCGGTG ACGCGGAGGTCGACAAGCTGCAGCGCGTCATCGAGGAGCGCGCGGTGCTCACGATCGCCCGCCGCCAGCCGATGGCCGTC GACCTGCGCGAGATCGTCGGTGCGATGCGCGTCGCCACCGATCTGGAGCGGATCGGCGACCTCGCCAAGAACATCGGCAA GCGCGTCGCCGCGCTGGAGAGCGACTTTCATCCGCTGAAGCTGATCCGCGGCCTGGAGCACATGACCGACCTCGTTCAGT CGCAGGTCAAGACGGTGCTGGATGCCTATGCGGCGCACGATTTGCCGGCGGCTATGACGGTGTGGAAAGGCGACGAGGAG GTCGACGCGATCTGCACCTCGCTGTTCCGCGAGCTCCTCACCTACATGATGGAAGACCCGCGCAACATCTCGTTCTGCAT CCATCTGATGTTCTGCGCCAAGAACATCGAGCGGATGGGCGATCACGCCACCAACATCGCCGAGACGGTGTTCTATATGA TCGAGGGCCAGCAGATCATGGACAAGCGCCCCAAGGGCGACATGACCAGTTTTGCGACCACGATCCCCGGCAACTGA
Upstream 100 bases:
>100_bases CACCAGCAAGATATTCACCTCGCCGAGCGATCGGCGGACCCAGGATTACATCACCGGCCGGTTCGGCTGACGCCGACAGC AATGCCCTCAGGAGATCATC
Downstream 100 bases:
>100_bases GAAAGACGATTCCGACATGGGCGCGCGAATTCTGGTGGTTGAGGACGAGGAGGCGCTGACGACGCTGCTGCGCTACAACC TCGAAGCCGAAGGCTACGAG
Product: transcriptional repressor for high-affinity phosphate uptake
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MASEHTAKAFDSDLQDLTRLVAEMGGLAERLIVDSVDALVRRDVALGQKVVAGDAEVDKLQRVIEERAVLTIARRQPMAV DLREIVGAMRVATDLERIGDLAKNIGKRVAALESDFHPLKLIRGLEHMTDLVQSQVKTVLDAYAAHDLPAAMTVWKGDEE VDAICTSLFRELLTYMMEDPRNISFCIHLMFCAKNIERMGDHATNIAETVFYMIEGQQIMDKRPKGDMTSFATTIPGN
Sequences:
>Translated_238_residues MASEHTAKAFDSDLQDLTRLVAEMGGLAERLIVDSVDALVRRDVALGQKVVAGDAEVDKLQRVIEERAVLTIARRQPMAV DLREIVGAMRVATDLERIGDLAKNIGKRVAALESDFHPLKLIRGLEHMTDLVQSQVKTVLDAYAAHDLPAAMTVWKGDEE VDAICTSLFRELLTYMMEDPRNISFCIHLMFCAKNIERMGDHATNIAETVFYMIEGQQIMDKRPKGDMTSFATTIPGN >Mature_237_residues ASEHTAKAFDSDLQDLTRLVAEMGGLAERLIVDSVDALVRRDVALGQKVVAGDAEVDKLQRVIEERAVLTIARRQPMAVD LREIVGAMRVATDLERIGDLAKNIGKRVAALESDFHPLKLIRGLEHMTDLVQSQVKTVLDAYAAHDLPAAMTVWKGDEEV DAICTSLFRELLTYMMEDPRNISFCIHLMFCAKNIERMGDHATNIAETVFYMIEGQQIMDKRPKGDMTSFATTIPGN
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=215, Percent_Identity=35.3488372093023, Blast_Score=142, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 26473; Mature: 26342
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASEHTAKAFDSDLQDLTRLVAEMGGLAERLIVDSVDALVRRDVALGQKVVAGDAEVDKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHH QRVIEERAVLTIARRQPMAVDLREIVGAMRVATDLERIGDLAKNIGKRVAALESDFHPLK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LIRGLEHMTDLVQSQVKTVLDAYAAHDLPAAMTVWKGDEEVDAICTSLFRELLTYMMEDP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC RNISFCIHLMFCAKNIERMGDHATNIAETVFYMIEGQQIMDKRPKGDMTSFATTIPGN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHCCCCC >Mature Secondary Structure ASEHTAKAFDSDLQDLTRLVAEMGGLAERLIVDSVDALVRRDVALGQKVVAGDAEVDKL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHH QRVIEERAVLTIARRQPMAVDLREIVGAMRVATDLERIGDLAKNIGKRVAALESDFHPLK HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LIRGLEHMTDLVQSQVKTVLDAYAAHDLPAAMTVWKGDEEVDAICTSLFRELLTYMMEDP HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC RNISFCIHLMFCAKNIERMGDHATNIAETVFYMIEGQQIMDKRPKGDMTSFATTIPGN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]