| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is pstS [H]
Identifier: 146338740
GI number: 146338740
Start: 1791148
End: 1792158
Strand: Direct
Name: pstS [H]
Synonym: BRADO1674
Alternate gene names: 146338740
Gene position: 1791148-1792158 (Clockwise)
Preceding gene: 146338739
Following gene: 146338741
Centisome position: 24.02
GC content: 62.91
Gene sequence:
>1011_bases ATGAATTTCGTCAAAGCTATCGTCGCTGCCGGCTTGGTCGCCGCATCGACGTCGGCATTCGCTGCCGACATCACCGGCGC GGGCGCGACGTTCCCGTTCCCGATCTATTCGAAGTGGGCTGACGCCTACAAGAAGGAGACCGGCAACGGTCTGAACTACC AGTCGATCGGTTCCGGCGGCGGCATCAAGCAGATCCAGGCCAAGACCGTGACATTCGGCGCCACCGACGCGCCGCTCAAG GCCGAGCAGCTCGAGAAGGACGGCCTGGTGCAGTGGCCGCAGGTGATGGGCGGCATCGTGCCGGTCGTCAACCTCGAGGG CGTGAAGCCGGGCGAGATGGTGCTGGACGGCGAGACGCTCGCCAACATCTATCTCGGCAAGATCACCAAGTGGGATGACG CCGCGATCAAGAAGCTGAACCCCAGCGTCAAGCTGCCGAGCGATGCGATCGCCGTGGTCCGCCGTTCCGACGGCTCGGGC ACGACCTTCAACTTCACCTATTATCTCTCCGAGGCCAGCGCCGACTGGAAGAGCAAGGTCGGCTCCAACACCGCCGTCGA GTGGCCGGTCGGCGTCGGCGCGAAAGGTAACGAGGGTGTGTCGGGCAACATCAGCCAGACCAAGAACTCGATCGGCTATG TCGAGTACGCCTATGCCAAGCAGAACAAGCTGACCTACACCGCGATGGTCAACAAGGCCGGCAAGACCGTGCAGCCGACC GTCGAGGCCTTCCAGGCTGCCGCTGCCAACGCCGACTGGGCCAAGGCTCCCGGCTATTACGTGATCCTGGCCAACCAGGC CGGCGACAAGTCCTGGCCGATGACGGCCGCGACCTTCATCCTGATGCACAAGGAGCCGACCGACAAGGCAGCCTCCGCCG AAGCGCTCAAGTTCTTCAAGTGGTCGTTCGAAAAGGGCGACAAGATGGCCGAGGAGCTCGACTACATCCCGATGCCCGAC AGCGTCGTGAAGCTGATCGAGAAGACCTGGTCGTCGGACATCAAGAGCTGA
Upstream 100 bases:
>100_bases ATTGAACCTTTATAAAAGCCACACTGAGGCCCCGTAAAGCGGCCCGGGAAGCGCAATCGGGTGCAAATGGCGCTTCGCTT CCCAAGCATGGAGACCAGCT
Downstream 100 bases:
>100_bases TCGTCGACGAACACCATTCCCCTCTCCCGGTCGCCGGGGGAGGGGACGCTACCGGGGTCAGGCGTGTCAAAACAACAGGG GGCAGAATTGGCAGAGATGG
Product: high-affinity phosphate ABC transporter periplasmic substrate-binding protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MNFVKAIVAAGLVAASTSAFAADITGAGATFPFPIYSKWADAYKKETGNGLNYQSIGSGGGIKQIQAKTVTFGATDAPLK AEQLEKDGLVQWPQVMGGIVPVVNLEGVKPGEMVLDGETLANIYLGKITKWDDAAIKKLNPSVKLPSDAIAVVRRSDGSG TTFNFTYYLSEASADWKSKVGSNTAVEWPVGVGAKGNEGVSGNISQTKNSIGYVEYAYAKQNKLTYTAMVNKAGKTVQPT VEAFQAAAANADWAKAPGYYVILANQAGDKSWPMTAATFILMHKEPTDKAASAEALKFFKWSFEKGDKMAEELDYIPMPD SVVKLIEKTWSSDIKS
Sequences:
>Translated_336_residues MNFVKAIVAAGLVAASTSAFAADITGAGATFPFPIYSKWADAYKKETGNGLNYQSIGSGGGIKQIQAKTVTFGATDAPLK AEQLEKDGLVQWPQVMGGIVPVVNLEGVKPGEMVLDGETLANIYLGKITKWDDAAIKKLNPSVKLPSDAIAVVRRSDGSG TTFNFTYYLSEASADWKSKVGSNTAVEWPVGVGAKGNEGVSGNISQTKNSIGYVEYAYAKQNKLTYTAMVNKAGKTVQPT VEAFQAAAANADWAKAPGYYVILANQAGDKSWPMTAATFILMHKEPTDKAASAEALKFFKWSFEKGDKMAEELDYIPMPD SVVKLIEKTWSSDIKS >Mature_336_residues MNFVKAIVAAGLVAASTSAFAADITGAGATFPFPIYSKWADAYKKETGNGLNYQSIGSGGGIKQIQAKTVTFGATDAPLK AEQLEKDGLVQWPQVMGGIVPVVNLEGVKPGEMVLDGETLANIYLGKITKWDDAAIKKLNPSVKLPSDAIAVVRRSDGSG TTFNFTYYLSEASADWKSKVGSNTAVEWPVGVGAKGNEGVSGNISQTKNSIGYVEYAYAKQNKLTYTAMVNKAGKTVQPT VEAFQAAAANADWAKAPGYYVILANQAGDKSWPMTAATFILMHKEPTDKAASAEALKFFKWSFEKGDKMAEELDYIPMPD SVVKLIEKTWSSDIKS
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=325, Percent_Identity=54.7692307692308, Blast_Score=368, Evalue=1e-103,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35899; Mature: 35899
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFVKAIVAAGLVAASTSAFAADITGAGATFPFPIYSKWADAYKKETGNGLNYQSIGSGG CHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC GIKQIQAKTVTFGATDAPLKAEQLEKDGLVQWPQVMGGIVPVVNLEGVKPGEMVLDGETL CEEEEEEEEEEECCCCCCCCHHHHCCCCCCCCHHHHCCCEEEEEECCCCCCCEEECCHHH ANIYLGKITKWDDAAIKKLNPSVKLPSDAIAVVRRSDGSGTTFNFTYYLSEASADWKSKV HHHHCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCHHHHHC GSNTAVEWPVGVGAKGNEGVSGNISQTKNSIGYVEYAYAKQNKLTYTAMVNKAGKTVQPT CCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCHH VEAFQAAAANADWAKAPGYYVILANQAGDKSWPMTAATFILMHKEPTDKAASAEALKFFK HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHH WSFEKGDKMAEELDYIPMPDSVVKLIEKTWSSDIKS HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNFVKAIVAAGLVAASTSAFAADITGAGATFPFPIYSKWADAYKKETGNGLNYQSIGSGG CHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC GIKQIQAKTVTFGATDAPLKAEQLEKDGLVQWPQVMGGIVPVVNLEGVKPGEMVLDGETL CEEEEEEEEEEECCCCCCCCHHHHCCCCCCCCHHHHCCCEEEEEECCCCCCCEEECCHHH ANIYLGKITKWDDAAIKKLNPSVKLPSDAIAVVRRSDGSGTTFNFTYYLSEASADWKSKV HHHHCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCHHHHHC GSNTAVEWPVGVGAKGNEGVSGNISQTKNSIGYVEYAYAKQNKLTYTAMVNKAGKTVQPT CCCCEEECCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCEEEEEEECCCCCCCCHH VEAFQAAAANADWAKAPGYYVILANQAGDKSWPMTAATFILMHKEPTDKAASAEALKFFK HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHH WSFEKGDKMAEELDYIPMPDSVVKLIEKTWSSDIKS HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]