| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is cbbP [H]
Identifier: 146338723
GI number: 146338723
Start: 1773555
End: 1774430
Strand: Direct
Name: cbbP [H]
Synonym: BRADO1656
Alternate gene names: 146338723
Gene position: 1773555-1774430 (Clockwise)
Preceding gene: 146338722
Following gene: 146338724
Centisome position: 23.79
GC content: 60.84
Gene sequence:
>876_bases ATGTCACGTCGTCATCCCATCATTTCGATCACGGGCTCGTCGGGCGCCGGCACCACGTCGGTCAAGAAGACCTTCGAGAA CATCTTCCGCCGCGAGAACGTCAAGGCCGCCTATATCGAGGGCGATGCCTTTCACCGCTACAATCGCGAGGAGATGCGCC GCAAGATGGTCGAGGAGGCCGAGCGGGGCAACAAGCACTTCAGCCATTTCAGCCCCGACACCAATCTGTTCGAGGAGCTC GAGAAGACCTTCCGCGACTATTCGGAAACGGGCACGGGTACCACGCGCCACTACGTGCATGATGATGAGGAGGCGCGGCT CTACGACGCGAGGCCCGGCACCTTCACGGAGTGGACGCAGCTGCCGGCGGATTCCGATCTTCTGTTCTATGAAGGCCTGC ACGGCGCCGTCGTCACCGAGATGGTCAACATCGCCCAGCATGCCGACCTGAAGATCGGCGTCGTCCCGGTCATCAATCTC GAATGGATCCAGAAGCTGCATCGCGACCGTGCGTCGCGCGGCTACACCACCGAGGCGGTCACCGACACCATCCTGCGGCG CATGCCGGACTATGTGAACTACATCATCCCGCAATTCTCCGAGACCGACATCAACTTCCAGCGCGTGCCGACAGTCGACA CGTCGAACCCGTTCATCGCGCGCTGGATCCCGACGCCCGACGAGTCGATGGTCGTCATCCGCCTCAAGAACCCCCGCGGC ATCGACTTTCCCTATCTGCTGTCGATGATCCACGGCAGCTTCATGTCGCGCGCCAATTCGATCGTGATCCATGGCTCGAA GCTCGACCTCGCCATGCAGCTCATTCTCACCCCGATGATCATGCAACTGATGGACCGAAAGAGGCGCACGCTATGA
Upstream 100 bases:
>100_bases TTCGAAACCAGCGATGCGCCCCTGTTCGCCCGCCGCGGCCTGTTCCGCTGAGCGCGCTGTCGAGCCGGCACCGCTCGGCG AGACTTCCGGAGATATAGTC
Downstream 100 bases:
>100_bases CCGCCACCGCCGTGCAAAAGGCAGCCGCCAAAGTTGATCCGGCCCACGCCGAAATGGCGAACGCGATCCGCTTCCTGGCC ATCGATGCCGTGGAGAAGGC
Product: phosphoribulokinase
Products: NA
Alternate protein names: PRK; PRKase; Phosphopentokinase [H]
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSRRHPIISITGSSGAGTTSVKKTFENIFRRENVKAAYIEGDAFHRYNREEMRRKMVEEAERGNKHFSHFSPDTNLFEEL EKTFRDYSETGTGTTRHYVHDDEEARLYDARPGTFTEWTQLPADSDLLFYEGLHGAVVTEMVNIAQHADLKIGVVPVINL EWIQKLHRDRASRGYTTEAVTDTILRRMPDYVNYIIPQFSETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG IDFPYLLSMIHGSFMSRANSIVIHGSKLDLAMQLILTPMIMQLMDRKRRTL
Sequences:
>Translated_291_residues MSRRHPIISITGSSGAGTTSVKKTFENIFRRENVKAAYIEGDAFHRYNREEMRRKMVEEAERGNKHFSHFSPDTNLFEEL EKTFRDYSETGTGTTRHYVHDDEEARLYDARPGTFTEWTQLPADSDLLFYEGLHGAVVTEMVNIAQHADLKIGVVPVINL EWIQKLHRDRASRGYTTEAVTDTILRRMPDYVNYIIPQFSETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG IDFPYLLSMIHGSFMSRANSIVIHGSKLDLAMQLILTPMIMQLMDRKRRTL >Mature_290_residues SRRHPIISITGSSGAGTTSVKKTFENIFRRENVKAAYIEGDAFHRYNREEMRRKMVEEAERGNKHFSHFSPDTNLFEELE KTFRDYSETGTGTTRHYVHDDEEARLYDARPGTFTEWTQLPADSDLLFYEGLHGAVVTEMVNIAQHADLKIGVVPVINLE WIQKLHRDRASRGYTTEAVTDTILRRMPDYVNYIIPQFSETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRGI DFPYLLSMIHGSFMSRANSIVIHGSKLDLAMQLILTPMIMQLMDRKRRTL
Specific function: Unknown
COG id: COG3954
COG function: function code C; Phosphoribulokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoribulokinase family [H]
Homologues:
Organism=Escherichia coli, GI2367214, Length=288, Percent_Identity=54.1666666666667, Blast_Score=338, Evalue=2e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006082 - InterPro: IPR006083 [H]
Pfam domain/function: PF00485 PRK [H]
EC number: =2.7.1.19 [H]
Molecular weight: Translated: 33657; Mature: 33526
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: PS00567 PHOSPHORIBULOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRHPIISITGSSGAGTTSVKKTFENIFRRENVKAAYIEGDAFHRYNREEMRRKMVEEA CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCHHHHHHHHHHHH ERGNKHFSHFSPDTNLFEELEKTFRDYSETGTGTTRHYVHDDEEARLYDARPGTFTEWTQ HHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCCHHHHC LPADSDLLFYEGLHGAVVTEMVNIAQHADLKIGVVPVINLEWIQKLHRDRASRGYTTEAV CCCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHCCCCCHHHH TDTILRRMPDYVNYIIPQFSETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG HHHHHHHCHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCC IDFPYLLSMIHGSFMSRANSIVIHGSKLDLAMQLILTPMIMQLMDRKRRTL CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRRHPIISITGSSGAGTTSVKKTFENIFRRENVKAAYIEGDAFHRYNREEMRRKMVEEA CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHCCHHHHHHHHHHHH ERGNKHFSHFSPDTNLFEELEKTFRDYSETGTGTTRHYVHDDEEARLYDARPGTFTEWTQ HHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCCHHHHC LPADSDLLFYEGLHGAVVTEMVNIAQHADLKIGVVPVINLEWIQKLHRDRASRGYTTEAV CCCCCCEEEECCCCHHHHHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHCCCCCHHHH TDTILRRMPDYVNYIIPQFSETDINFQRVPTVDTSNPFIARWIPTPDESMVVIRLKNPRG HHHHHHHCHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCC IDFPYLLSMIHGSFMSRANSIVIHGSKLDLAMQLILTPMIMQLMDRKRRTL CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA