Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146338577

Identifier: 146338577

GI number: 146338577

Start: 1606388

End: 1606807

Strand: Direct

Name: 146338577

Synonym: BRADO1499

Alternate gene names: NA

Gene position: 1606388-1606807 (Clockwise)

Preceding gene: 146338576

Following gene: 146338578

Centisome position: 21.54

GC content: 65.0

Gene sequence:

>420_bases
ATGAAGTCGCGCGAAACGCTGATCCGTCTGAAGAAATTTCAGGTGGATGAGAAACGCCGCCGGGTGACGCAGATCGAGGG
CATGATCGCTGACTTCCAGCGCATGTCGGCCGAGCTCGAGCGGGAAATCCAGACCGAACAGGAGCGGGCCGGCATCAACG
ACCCGACCCATTTCGCTTATCCGACCTATGCCAAGGCGGCGATCCAGCGCCGCGAGAACCTGACGCGCTCGGCCGACGAG
CTGCGCGCCCAGCTCGAGGACGCCAAGGCCGCGCTGTCCGAGGCGTTCGAGGAGATGAAGAAGGTCGAGCTGCTCGACGA
GCGCGACCAGGCCCGTGAAAAGGCCGAAGAGAGCGCCCGCGAGCAGGCCGACATGGACAGTATCGGCCTGATGCGCGCCC
GGCTCGGCGTCATCGCCTGA

Upstream 100 bases:

>100_bases
GTAATCATCCCCTCCATGTAACGAGCCTAGTCGGTCGGCCCAGCAAGGGCGGCCGGCCGTGTCCCGCGCCGTCCACGGGA
CTTCTGGGGAGTATGAGTCG

Downstream 100 bases:

>100_bases
GCCGGACCGTCATGGTCGGAGACTATCGAAAACCCGGGCCGCAAGGTCCGGGTTTTTCGTCGCGCCCGCCCGGCTGGAGC
GCCGCGCGCGATGTGTGCTA

Product: putative flagelar FliJ protein

Products: NA

Alternate protein names: Flagellar Export FliJ; Flagelar FliJ Protein

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKSRETLIRLKKFQVDEKRRRVTQIEGMIADFQRMSAELEREIQTEQERAGINDPTHFAYPTYAKAAIQRRENLTRSADE
LRAQLEDAKAALSEAFEEMKKVELLDERDQAREKAEESAREQADMDSIGLMRARLGVIA

Sequences:

>Translated_139_residues
MKSRETLIRLKKFQVDEKRRRVTQIEGMIADFQRMSAELEREIQTEQERAGINDPTHFAYPTYAKAAIQRRENLTRSADE
LRAQLEDAKAALSEAFEEMKKVELLDERDQAREKAEESAREQADMDSIGLMRARLGVIA
>Mature_139_residues
MKSRETLIRLKKFQVDEKRRRVTQIEGMIADFQRMSAELEREIQTEQERAGINDPTHFAYPTYAKAAIQRRENLTRSADE
LRAQLEDAKAALSEAFEEMKKVELLDERDQAREKAEESAREQADMDSIGLMRARLGVIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16114; Mature: 16114

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRETLIRLKKFQVDEKRRRVTQIEGMIADFQRMSAELEREIQTEQERAGINDPTHFAY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PTYAKAAIQRRENLTRSADELRAQLEDAKAALSEAFEEMKKVELLDERDQAREKAEESAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQADMDSIGLMRARLGVIA
HHHCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSRETLIRLKKFQVDEKRRRVTQIEGMIADFQRMSAELEREIQTEQERAGINDPTHFAY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PTYAKAAIQRRENLTRSADELRAQLEDAKAALSEAFEEMKKVELLDERDQAREKAEESAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQADMDSIGLMRARLGVIA
HHHCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA