| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is tauC [C]
Identifier: 146338568
GI number: 146338568
Start: 1594459
End: 1595268
Strand: Direct
Name: tauC [C]
Synonym: BRADO1489
Alternate gene names: 146338568
Gene position: 1594459-1595268 (Clockwise)
Preceding gene: 146338567
Following gene: 146338569
Centisome position: 21.38
GC content: 67.78
Gene sequence:
>810_bases ATGATGGCGCTGAGCCGGCTGCGCAAGCTCGACCGCACTATCGTCCCCGTCCTCGTGCTCGCCGGCTGGGAGGCGTTCTC GCGCTCCGGCGCGCTGCCGGCGGCGTTGCTGCCGGCGCCGTCGACGGTCGTATGGGCGTGGGCGGATTGGCTGGTCGGCA CCGACGGCAACACCCAGACCTATAGCGGCCATTGGCTCGCCGACATGCTGGCGAGCCTGTCGCGCGTCGCGGCGGGCTTC GCCATCGCCACCGTGCTTGGCGTGACGCTCGGCGTCGCCATCGGCTGGTCGCGCAAGACCGAGATCGTGATCGAGCCGAC CTTGCAGATGCTGCGCCCGATCCCTCCGGTGTCGTGGATCCCGCTCGCCATCATCTGGTTCGGCATCGCCAACAAGCCGG CGATCTTCCTGGTGTTCCTCGGCGCCTTCTTCCCGATCCTGCTCAACACCATCCACGGCGTGAAGACCTGCGACCGCAAC CTCATCCGCGCCGGCGCCATGGTCGGCGGCAGCGAGCGCAAGCTGCTGCGCTACATCGTGGTGCCCGCGGCCATGCCCAG CATTTTCGCCGGCCTGCGCATCGGCATCGGCTCGGCCTGGATGCTCACGGTCACGGCCGAAATGGTCGCAGTGAAGAGCG GGCTCGGCTACGTGCTGTGGGACAGCTATTATTTCCTGCGCTACGATCTGGTACTGGCGGCGATGGCGAGCATCGGCCTG CTCGGCTTCTGCAGCGATCTCGTCATCCGCACCGTGATGGCGCGGGTGCTGCACTGGCAGCGCAACACCACCCTGCGCGG TGGAGAGTGA
Upstream 100 bases:
>100_bases TACATCAACTCGGACGTCACGGCCGCCGTCGAGAAGAACCTCGACTACCGCTTCCTGGAAGCAGCCACTGGCAAGCCGAA GACCGAGCTCGGCTACTGAG
Downstream 100 bases:
>100_bases TGATGGCGACGATCGACATCTCCGGCGTCTCGAAGATCTTCGCCGACAGGAAGCGCAATGCCGACGTCACCGCACTGGCG AATATAAACCTCTCCATCGC
Product: ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MMALSRLRKLDRTIVPVLVLAGWEAFSRSGALPAALLPAPSTVVWAWADWLVGTDGNTQTYSGHWLADMLASLSRVAAGF AIATVLGVTLGVAIGWSRKTEIVIEPTLQMLRPIPPVSWIPLAIIWFGIANKPAIFLVFLGAFFPILLNTIHGVKTCDRN LIRAGAMVGGSERKLLRYIVVPAAMPSIFAGLRIGIGSAWMLTVTAEMVAVKSGLGYVLWDSYYFLRYDLVLAAMASIGL LGFCSDLVIRTVMARVLHWQRNTTLRGGE
Sequences:
>Translated_269_residues MMALSRLRKLDRTIVPVLVLAGWEAFSRSGALPAALLPAPSTVVWAWADWLVGTDGNTQTYSGHWLADMLASLSRVAAGF AIATVLGVTLGVAIGWSRKTEIVIEPTLQMLRPIPPVSWIPLAIIWFGIANKPAIFLVFLGAFFPILLNTIHGVKTCDRN LIRAGAMVGGSERKLLRYIVVPAAMPSIFAGLRIGIGSAWMLTVTAEMVAVKSGLGYVLWDSYYFLRYDLVLAAMASIGL LGFCSDLVIRTVMARVLHWQRNTTLRGGE >Mature_269_residues MMALSRLRKLDRTIVPVLVLAGWEAFSRSGALPAALLPAPSTVVWAWADWLVGTDGNTQTYSGHWLADMLASLSRVAAGF AIATVLGVTLGVAIGWSRKTEIVIEPTLQMLRPIPPVSWIPLAIIWFGIANKPAIFLVFLGAFFPILLNTIHGVKTCDRN LIRAGAMVGGSERKLLRYIVVPAAMPSIFAGLRIGIGSAWMLTVTAEMVAVKSGLGYVLWDSYYFLRYDLVLAAMASIGL LGFCSDLVIRTVMARVLHWQRNTTLRGGE
Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=190, Percent_Identity=35.2631578947368, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI87081802, Length=252, Percent_Identity=34.9206349206349, Blast_Score=127, Evalue=9e-31, Organism=Escherichia coli, GI1789033, Length=157, Percent_Identity=30.5732484076433, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29254; Mature: 29254
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMALSRLRKLDRTIVPVLVLAGWEAFSRSGALPAALLPAPSTVVWAWADWLVGTDGNTQT CCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEECCCCCEEEEEEEHHEEECCCCCCE YSGHWLADMLASLSRVAAGFAIATVLGVTLGVAIGWSRKTEIVIEPTLQMLRPIPPVSWI ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCCCHHH PLAIIWFGIANKPAIFLVFLGAFFPILLNTIHGVKTCDRNLIRAGAMVGGSERKLLRYIV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VPAAMPSIFAGLRIGIGSAWMLTVTAEMVAVKSGLGYVLWDSYYFLRYDLVLAAMASIGL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHH LGFCSDLVIRTVMARVLHWQRNTTLRGGE HHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MMALSRLRKLDRTIVPVLVLAGWEAFSRSGALPAALLPAPSTVVWAWADWLVGTDGNTQT CCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEEECCCCCEEEEEEEHHEEECCCCCCE YSGHWLADMLASLSRVAAGFAIATVLGVTLGVAIGWSRKTEIVIEPTLQMLRPIPPVSWI ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHCCCCCCHHH PLAIIWFGIANKPAIFLVFLGAFFPILLNTIHGVKTCDRNLIRAGAMVGGSERKLLRYIV HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH VPAAMPSIFAGLRIGIGSAWMLTVTAEMVAVKSGLGYVLWDSYYFLRYDLVLAAMASIGL HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHH LGFCSDLVIRTVMARVLHWQRNTTLRGGE HHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA