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The map label for this gene is cycY [H]

Identifier: 146338536

GI number: 146338536

Start: 1560408

End: 1560779

Strand: Reverse

Name: cycY [H]

Synonym: BRADO1456

Alternate gene names: 146338536

Gene position: 1560779-1560408 (Counterclockwise)

Preceding gene: 146338539

Following gene: 146338535

Centisome position: 20.93

GC content: 61.83

Gene sequence:

>372_bases
ATGCTCCGACGCATCGTTCTCATCGTCGCATTTGCGACCATCGCATCGGACGCCAGAGCGCTCGACGGCGACCCGGCCGC
GGGCAAAAGCATCTTCCAGCGCATCTGCCAGAACTGCCACTCGCCCGAGATCGGCATCAACAAGGTGGGTCCGAGCCTTT
GGAACGTCGTCGGACGGCAGCCGGCGGCTGTGCCGGACTACGCGTACTCCGAAAGCATGAAGAACAACAAGACGCCTTGG
ACGGCTGCGGCGTTGGACGCCTATATCGCCGATCCGCGCGGCGACGTTCACGGCGTCAAGATGTACTTCAAGGGACTCGC
TGACGCGAAGGAACGCGCGGACGTCGTTGCCTTCCTATCAACGCTGAAATAG

Upstream 100 bases:

>100_bases
CCAAGACAAGGACGGGAGCCCTGCTCCGGCCCGATGATGTCCGAGGTTGGCTGACGGCACGGTGGCGAGCCCCGCCTGCG
CGTCCAAAATGGGGGATAGC

Downstream 100 bases:

>100_bases
CGCGGCGCGCGTTGCGGTGATTCCCACCTGGGCTCTTTCGCCGAGGGTGGTGATGTCGTGTCTGATTGCGAAGCCTCAGC
GCCGCGCGGGTTACGTCCTG

Product: cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MLRRIVLIVAFATIASDARALDGDPAAGKSIFQRICQNCHSPEIGINKVGPSLWNVVGRQPAAVPDYAYSESMKNNKTPW
TAAALDAYIADPRGDVHGVKMYFKGLADAKERADVVAFLSTLK

Sequences:

>Translated_123_residues
MLRRIVLIVAFATIASDARALDGDPAAGKSIFQRICQNCHSPEIGINKVGPSLWNVVGRQPAAVPDYAYSESMKNNKTPW
TAAALDAYIADPRGDVHGVKMYFKGLADAKERADVVAFLSTLK
>Mature_123_residues
MLRRIVLIVAFATIASDARALDGDPAAGKSIFQRICQNCHSPEIGINKVGPSLWNVVGRQPAAVPDYAYSESMKNNKTPW
TAAALDAYIADPRGDVHGVKMYFKGLADAKERADVVAFLSTLK

Specific function: Electron transfer pathways that operates during photosynthesis [H]

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI11128019, Length=99, Percent_Identity=37.3737373737374, Blast_Score=77, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17566554, Length=99, Percent_Identity=40.4040404040404, Blast_Score=83, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17539604, Length=98, Percent_Identity=35.7142857142857, Blast_Score=77, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320796, Length=99, Percent_Identity=33.3333333333333, Blast_Score=77, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6322508, Length=98, Percent_Identity=30.6122448979592, Blast_Score=66, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17137204, Length=102, Percent_Identity=43.1372549019608, Blast_Score=90, Evalue=4e-19,
Organism=Drosophila melanogaster, GI17137228, Length=100, Percent_Identity=35, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13305; Mature: 13305

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRIVLIVAFATIASDARALDGDPAAGKSIFQRICQNCHSPEIGINKVGPSLWNVVGRQ
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCHHHHHHHCCC
PAAVPDYAYSESMKNNKTPWTAAALDAYIADPRGDVHGVKMYFKGLADAKERADVVAFLS
CCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TLK
HCC
>Mature Secondary Structure
MLRRIVLIVAFATIASDARALDGDPAAGKSIFQRICQNCHSPEIGINKVGPSLWNVVGRQ
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCHHCCHHHHHHHCCC
PAAVPDYAYSESMKNNKTPWTAAALDAYIADPRGDVHGVKMYFKGLADAKERADVVAFLS
CCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
TLK
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8385603 [H]