| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ygcG [H]
Identifier: 146338498
GI number: 146338498
Start: 1514603
End: 1515502
Strand: Direct
Name: ygcG [H]
Synonym: BRADO1416
Alternate gene names: 146338498
Gene position: 1514603-1515502 (Clockwise)
Preceding gene: 146338497
Following gene: 146338499
Centisome position: 20.31
GC content: 70.11
Gene sequence:
>900_bases GTGCGCGCGCTGCCGGCCCTGAAGGCGCTGCTAGCGATTCTGCTCGTCGGCCTCGCCACGCTGGTGTGGGCCGACGTCGC GGTGCCGCAGCTGACCGGCCGCGTCGTCGACCAGACCGGAACGCTGTCGTCGTCCGACATCGCCGGCCTGACGCAGAAGC TGAAGGACCTGGAGGCGCGCAAGGGCAGCCAGGTCGCGGTGCTGATCGTGCCGACCACCCAGCCGGAAACGATCGAGCAG TTCTCGCTCCGGGTCGCGGAAGCCTGGAAGATCGGCCGCAGGAAGGTCGACGACGGCGCGCTGCTGGTGATCGCCAAGGG TGACCGCAAGCTGCGCATCGAGGTCGGCTACGGGCTCGAAGGCAGCCTCACCGACGTCACCGCGCGCCGCATCATCGACG AGGTCATCACGCCGAAATTCCGCACCGGCGATTTCGCCGGCGGTATCGATGCGGGCGTCGACCGCATCATCGGCGTCGTC AATGGCGAGACGCTGCCGGTGCCGCAGCCGCAGGCCTCGCATGGCAACGATCTCGACTTCGATTCGCTCTCGTCGTTCGC GCCGGTGGCGCTGTTCGGCTCGCTCGTCATCGGCGGCATCTTGCGGACGTTCCTCGGTCGCCTGCTGGGCGCGTTCGCAA CCGCGGGCGCGATGGGCGTGCTCGCCTGGCTCATGGTGCAATCGGCCACGCTCGCTGCGCTCTCGGCCATCGCCGGCTTC GTCATCGCCTTCATCGGCGGCAGCTTCATGTCGATGGACACGCCTGGACCGGGCCGCCGCGGCGGCTGGTCGGGCGGCTC GTCGTCGTCAGGATGGAGCAGCGGCAGCTCGAGCGACAGCGGCAGCTTCTCCGGCGGGGGCGGCAGCTTCGGCGGCGGCG GCGCTTCGGGCAGCTGGTGA
Upstream 100 bases:
>100_bases CAACTTCACCGTCGAGAACGAGCGCGAGATCTCGGTCGCGCCGAAGGTCGACTTCAACGCGCCGTCGCCTGCGCCCTCGA AATAACCGGAGCGCTGTACC
Downstream 100 bases:
>100_bases GGAGGGGCGCGCGACCATGAGCATCGGGCGGATCGGCCGGCATCTCCTGCACCATCATTGGCGGCTGAGGCGCATCTTCA CCGCCGATGCGCTCGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MRALPALKALLAILLVGLATLVWADVAVPQLTGRVVDQTGTLSSSDIAGLTQKLKDLEARKGSQVAVLIVPTTQPETIEQ FSLRVAEAWKIGRRKVDDGALLVIAKGDRKLRIEVGYGLEGSLTDVTARRIIDEVITPKFRTGDFAGGIDAGVDRIIGVV NGETLPVPQPQASHGNDLDFDSLSSFAPVALFGSLVIGGILRTFLGRLLGAFATAGAMGVLAWLMVQSATLAALSAIAGF VIAFIGGSFMSMDTPGPGRRGGWSGGSSSSGWSSGSSSDSGSFSGGGGSFGGGGASGSW
Sequences:
>Translated_299_residues MRALPALKALLAILLVGLATLVWADVAVPQLTGRVVDQTGTLSSSDIAGLTQKLKDLEARKGSQVAVLIVPTTQPETIEQ FSLRVAEAWKIGRRKVDDGALLVIAKGDRKLRIEVGYGLEGSLTDVTARRIIDEVITPKFRTGDFAGGIDAGVDRIIGVV NGETLPVPQPQASHGNDLDFDSLSSFAPVALFGSLVIGGILRTFLGRLLGAFATAGAMGVLAWLMVQSATLAALSAIAGF VIAFIGGSFMSMDTPGPGRRGGWSGGSSSSGWSSGSSSDSGSFSGGGGSFGGGGASGSW >Mature_299_residues MRALPALKALLAILLVGLATLVWADVAVPQLTGRVVDQTGTLSSSDIAGLTQKLKDLEARKGSQVAVLIVPTTQPETIEQ FSLRVAEAWKIGRRKVDDGALLVIAKGDRKLRIEVGYGLEGSLTDVTARRIIDEVITPKFRTGDFAGGIDAGVDRIIGVV NGETLPVPQPQASHGNDLDFDSLSSFAPVALFGSLVIGGILRTFLGRLLGAFATAGAMGVLAWLMVQSATLAALSAIAGF VIAFIGGSFMSMDTPGPGRRGGWSGGSSSSGWSSGSSSDSGSFSGGGGSFGGGGASGSW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=127, Percent_Identity=44.0944881889764, Blast_Score=114, Evalue=9e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 30564; Mature: 30564
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALPALKALLAILLVGLATLVWADVAVPQLTGRVVDQTGTLSSSDIAGLTQKLKDLEAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC KGSQVAVLIVPTTQPETIEQFSLRVAEAWKIGRRKVDDGALLVIAKGDRKLRIEVGYGLE CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCEECCCCEEEEEEECCCEEEEEECCCCC GSLTDVTARRIIDEVITPKFRTGDFAGGIDAGVDRIIGVVNGETLPVPQPQASHGNDLDF CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH DSLSSFAPVALFGSLVIGGILRTFLGRLLGAFATAGAMGVLAWLMVQSATLAALSAIAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAFIGGSFMSMDTPGPGRRGGWSGGSSSSGWSSGSSSDSGSFSGGGGSFGGGGASGSW HHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRALPALKALLAILLVGLATLVWADVAVPQLTGRVVDQTGTLSSSDIAGLTQKLKDLEAR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC KGSQVAVLIVPTTQPETIEQFSLRVAEAWKIGRRKVDDGALLVIAKGDRKLRIEVGYGLE CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCEECCCCEEEEEEECCCEEEEEECCCCC GSLTDVTARRIIDEVITPKFRTGDFAGGIDAGVDRIIGVVNGETLPVPQPQASHGNDLDF CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH DSLSSFAPVALFGSLVIGGILRTFLGRLLGAFATAGAMGVLAWLMVQSATLAALSAIAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIAFIGGSFMSMDTPGPGRRGGWSGGSSSSGWSSGSSSDSGSFSGGGGSFGGGGASGSW HHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]