| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338464
Identifier: 146338464
GI number: 146338464
Start: 1469339
End: 1470988
Strand: Direct
Name: 146338464
Synonym: BRADO1381
Alternate gene names: NA
Gene position: 1469339-1470988 (Clockwise)
Preceding gene: 146338463
Following gene: 146338465
Centisome position: 19.71
GC content: 66.73
Gene sequence:
>1650_bases GTGTTCGCCTACAGGTGGAGCGGCTGCCACGCCGGCGCCAACGCCGGCATGGCGTGGTCGCGCCAGCAGCAGAACTGGAG CCAGCTCGCCAATGCCGGCGCCGCGCCCGCGCAGCCTGCTCCGCAGCCGGTCGGCAACGTCAACAATCCGCCGCCGGCAA ATCCGCCGGTGGTTGCGAATCCCCCGCCGAACCCGCCGCCGCCGAACAACCCTGGCGGGAACAATGGCGGAGGCAAGCCG CCCACCAACAAGCCGCCGCACTACGGCGATCACGGCGGCGGCTGGTGGAAGCCGGGCAAGCCCTATCACGGCGACAAGGA TCATGATTGGGCGAACGGCAAGCCGCCGTACAAGCACGACCACGATAAGTACGACCACGACAAGCATGATCACGACAAGT ACGATCATGACAAATACGATCACGACGACCATCATTGGCCACAGGTCGGGTCGAAAGGTGGCGACAAGCCGTCATGGCCC TGGCAGACGCCGTACAAGGACAAGGACGACAAGGACAAGTACGACAACTACAAGGACGTCAAGTACAGCGACAACTGGTT CGGCAAGACGCACGACGACGACCATGACAAGTCGCGCGGCTGGTCGCAGCTGCAGTCCAGCGGCTATTCCGACCGGTCCT CCTGGCTCAGCCGCGACAAGGACGACGACAAGAAGGGCGGCGGCTGGGGCGGCAAGAAGGACGATGGCTATGACAAGCCT TCGTTCGGCTGGTCGAAGCAGCCGGCGAAGGACGGACACGACAGCTACGCCTGGATAAAGCCGGATCATCACGACGACGA CAAGCATGGCGGCGGTTACGGCTGGGGCGGCAAGCCGCGCGACGATGACGACGGCAAGGGCGGCTATGGCGGCAAGCCGG ACAAGGATCATTGGGAGCACCACGGCGGCAATGATGATCACGGCGGCTGGCCGTATCACCCGGGCAAGCCGGGCTGGCCG CCGAAGAACCCGCCGCCGAAAAATCCCCCGCCGCAGGGCAACAACAATCCGCCTGCGCAGAATCCTCCCGCGCAGAATCC TCCTGTCCAGAATCCGCCCCCGGTCGCGGGTGGCGGCAATGTCGCGCCGCTGCCGGTGGCGGCCGTGCAGATCCCGACCG CCATGTCCAGCAATGGCAGCGACGTCGTCGGCGGACTGCAGCTCGGCTGCGATTATCAGCTCGACCGGTTCGTCGTCGGC ATCCAGGCGATGGCCGATCTCGGCAACATCAACGTGTCCGGCCCGCTCGCGCCCGGGCTGACGCTGAACACGCGCACCAG CAATCTCTATACGGCCACCGTGCGCGCCGGCTATCTCGTGACGCCGGAGATCCTCGCCTATGTCCGCGGCGGCGCGGCGT GGACGCGGACCACCGTCGGGGTTGCCAACACCGCCACCGGACAGTCCGCCAGCGTCGCGTTCAACCGCAGCGGCTGGACG GTGGGCGCCGGCGTCGAGTGGATGTTCGCCCGCAACTGGTCGGCCTTCGCCGAATACGACTACGCCGATTTCGGCACCGC CACCGGCGTGCTGCCGGGCGCGGCCGCGATCACCGGCGGGCCGAACGTCGTCAGCCAGAAGACGCAGCTCCACACCGCGA TGATCGGTGTGAACTACCGGTTCGAGATGCTGTCGCGCGCCGGCCGCTGA
Upstream 100 bases:
>100_bases CGTATTTGGCGTGTGTCTTTGCCTATCGACTTTCGCAGGTAGTACGACATCGGTCTGGGCGACTGATCTTGCCCTGCCAC CACCTCTCCCGCCGCCGGAT
Downstream 100 bases:
>100_bases TCGCGCGCGTCGCGGCTCTCGGTCATGACAAGGCCGCCTGGTTCGTCCAGGCGGCCTTTTGCTGTTGCCGAACCGGCGGC TGGCCTGCATTGAACGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Outer-Membrane Immunogenic Protein; OmpA-Like Transmembrane Region; Outer Membrane Protein-Like; Outer Membrane Protein Omp; OmpA Domain-Containing Protein
Number of amino acids: Translated: 549; Mature: 549
Protein sequence:
>549_residues MFAYRWSGCHAGANAGMAWSRQQQNWSQLANAGAAPAQPAPQPVGNVNNPPPANPPVVANPPPNPPPPNNPGGNNGGGKP PTNKPPHYGDHGGGWWKPGKPYHGDKDHDWANGKPPYKHDHDKYDHDKHDHDKYDHDKYDHDDHHWPQVGSKGGDKPSWP WQTPYKDKDDKDKYDNYKDVKYSDNWFGKTHDDDHDKSRGWSQLQSSGYSDRSSWLSRDKDDDKKGGGWGGKKDDGYDKP SFGWSKQPAKDGHDSYAWIKPDHHDDDKHGGGYGWGGKPRDDDDGKGGYGGKPDKDHWEHHGGNDDHGGWPYHPGKPGWP PKNPPPKNPPPQGNNNPPAQNPPAQNPPVQNPPPVAGGGNVAPLPVAAVQIPTAMSSNGSDVVGGLQLGCDYQLDRFVVG IQAMADLGNINVSGPLAPGLTLNTRTSNLYTATVRAGYLVTPEILAYVRGGAAWTRTTVGVANTATGQSASVAFNRSGWT VGAGVEWMFARNWSAFAEYDYADFGTATGVLPGAAAITGGPNVVSQKTQLHTAMIGVNYRFEMLSRAGR
Sequences:
>Translated_549_residues MFAYRWSGCHAGANAGMAWSRQQQNWSQLANAGAAPAQPAPQPVGNVNNPPPANPPVVANPPPNPPPPNNPGGNNGGGKP PTNKPPHYGDHGGGWWKPGKPYHGDKDHDWANGKPPYKHDHDKYDHDKHDHDKYDHDKYDHDDHHWPQVGSKGGDKPSWP WQTPYKDKDDKDKYDNYKDVKYSDNWFGKTHDDDHDKSRGWSQLQSSGYSDRSSWLSRDKDDDKKGGGWGGKKDDGYDKP SFGWSKQPAKDGHDSYAWIKPDHHDDDKHGGGYGWGGKPRDDDDGKGGYGGKPDKDHWEHHGGNDDHGGWPYHPGKPGWP PKNPPPKNPPPQGNNNPPAQNPPAQNPPVQNPPPVAGGGNVAPLPVAAVQIPTAMSSNGSDVVGGLQLGCDYQLDRFVVG IQAMADLGNINVSGPLAPGLTLNTRTSNLYTATVRAGYLVTPEILAYVRGGAAWTRTTVGVANTATGQSASVAFNRSGWT VGAGVEWMFARNWSAFAEYDYADFGTATGVLPGAAAITGGPNVVSQKTQLHTAMIGVNYRFEMLSRAGR >Mature_549_residues MFAYRWSGCHAGANAGMAWSRQQQNWSQLANAGAAPAQPAPQPVGNVNNPPPANPPVVANPPPNPPPPNNPGGNNGGGKP PTNKPPHYGDHGGGWWKPGKPYHGDKDHDWANGKPPYKHDHDKYDHDKHDHDKYDHDKYDHDDHHWPQVGSKGGDKPSWP WQTPYKDKDDKDKYDNYKDVKYSDNWFGKTHDDDHDKSRGWSQLQSSGYSDRSSWLSRDKDDDKKGGGWGGKKDDGYDKP SFGWSKQPAKDGHDSYAWIKPDHHDDDKHGGGYGWGGKPRDDDDGKGGYGGKPDKDHWEHHGGNDDHGGWPYHPGKPGWP PKNPPPKNPPPQGNNNPPAQNPPAQNPPVQNPPPVAGGGNVAPLPVAAVQIPTAMSSNGSDVVGGLQLGCDYQLDRFVVG IQAMADLGNINVSGPLAPGLTLNTRTSNLYTATVRAGYLVTPEILAYVRGGAAWTRTTVGVANTATGQSASVAFNRSGWT VGAGVEWMFARNWSAFAEYDYADFGTATGVLPGAAAITGGPNVVSQKTQLHTAMIGVNYRFEMLSRAGR
Specific function: Unknown
COG id: COG3637
COG function: function code M; Opacity protein and related surface antigens
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59369; Mature: 59369
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAYRWSGCHAGANAGMAWSRQQQNWSQLANAGAAPAQPAPQPVGNVNNPPPANPPVVAN CCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECC PPPNPPPPNNPGGNNGGGKPPTNKPPHYGDHGGGWWKPGKPYHGDKDHDWANGKPPYKHD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HDKYDHDKHDHDKYDHDKYDHDDHHWPQVGSKGGDKPSWPWQTPYKDKDDKDKYDNYKDV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC KYSDNWFGKTHDDDHDKSRGWSQLQSSGYSDRSSWLSRDKDDDKKGGGWGGKKDDGYDKP EECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SFGWSKQPAKDGHDSYAWIKPDHHDDDKHGGGYGWGGKPRDDDDGKGGYGGKPDKDHWEH CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH HGGNDDHGGWPYHPGKPGWPPKNPPPKNPPPQGNNNPPAQNPPAQNPPVQNPPPVAGGGN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VAPLPVAAVQIPTAMSSNGSDVVGGLQLGCDYQLDRFVVGIQAMADLGNINVSGPLAPGL CCCCCEEEEECCHHHCCCCCCEECCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC TLNTRTSNLYTATVRAGYLVTPEILAYVRGGAAWTRTTVGVANTATGQSASVAFNRSGWT EEECCCCCEEEEEECCCEEECHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCEE VGAGVEWMFARNWSAFAEYDYADFGTATGVLPGAAAITGGPNVVSQKTQLHTAMIGVNYR ECCCEEEEEECCCHHHHCCCCHHCCCHHCCCCCCCEECCCCHHHHHHHHHEEEEEECCHH FEMLSRAGR HHHHHHCCC >Mature Secondary Structure MFAYRWSGCHAGANAGMAWSRQQQNWSQLANAGAAPAQPAPQPVGNVNNPPPANPPVVAN CCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECC PPPNPPPPNNPGGNNGGGKPPTNKPPHYGDHGGGWWKPGKPYHGDKDHDWANGKPPYKHD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC HDKYDHDKHDHDKYDHDKYDHDDHHWPQVGSKGGDKPSWPWQTPYKDKDDKDKYDNYKDV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC KYSDNWFGKTHDDDHDKSRGWSQLQSSGYSDRSSWLSRDKDDDKKGGGWGGKKDDGYDKP EECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SFGWSKQPAKDGHDSYAWIKPDHHDDDKHGGGYGWGGKPRDDDDGKGGYGGKPDKDHWEH CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH HGGNDDHGGWPYHPGKPGWPPKNPPPKNPPPQGNNNPPAQNPPAQNPPVQNPPPVAGGGN CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC VAPLPVAAVQIPTAMSSNGSDVVGGLQLGCDYQLDRFVVGIQAMADLGNINVSGPLAPGL CCCCCEEEEECCHHHCCCCCCEECCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC TLNTRTSNLYTATVRAGYLVTPEILAYVRGGAAWTRTTVGVANTATGQSASVAFNRSGWT EEECCCCCEEEEEECCCEEECHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCEE VGAGVEWMFARNWSAFAEYDYADFGTATGVLPGAAAITGGPNVVSQKTQLHTAMIGVNYR ECCCEEEEEECCCHHHHCCCCHHCCCHHCCCCCCCEECCCCHHHHHHHHHEEEEEECCHH FEMLSRAGR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA