| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is mrgA [H]
Identifier: 146338414
GI number: 146338414
Start: 1419504
End: 1420031
Strand: Direct
Name: mrgA [H]
Synonym: BRADO1329
Alternate gene names: 146338414
Gene position: 1419504-1420031 (Clockwise)
Preceding gene: 146338412
Following gene: 146338417
Centisome position: 19.04
GC content: 59.66
Gene sequence:
>528_bases GTGAGTAAAGCAAAGTCCGACAAGACTGCCCCCGAGCTCGATACCCCGACCGATCTGTCCCCCGATGCCGTGAACAAGAT CCAGACGGCGCTGAACACGCTGTTGGCGGACGCCTTCGCGCTTTACCTCAAGACCAAGAATTTCCACTGGCACGTCAGCG GCCGGCATTTTCATGACTACCATGAGATGCTCGACGAACAGTCGGATGCGATCTTCGCCACCACGGACCAACTGGCCGAG CGTGTCCGCAAGCTCGGCGGCACGACGCTCAAATCGATTAGCCAGATCAGCAAGCTGCAGACCATCAAGGACAACAACGA AGAATATGTGCCGCCGCGCGAAATGTTGCGGGAGTTGATGGAGGACAACAAGCATATCGCGGCCGCGATGCGGAAGGCGC ACGAGCTGTGCGACGATAACGACGATCCAGCGACCGCGGGTTTGCTCGAGAACTTCATCGACGAGACCGAGCGCCGCACC TGGTTCCTGTTCGAGGCCAGCCGCCAGGAAGGCAGCAACGCGGCGTGA
Upstream 100 bases:
>100_bases CCGGCAAACACAGTTCCTTGAACGGAACTGGAGGGGTCAGCGAGCGTTAACGGGTCCGATCACCCGTGTCCATTGCTGCT TCTAACAGGAAGGTTGACCC
Downstream 100 bases:
>100_bases GCCGATTGCCAGATACAATCTTTAAGGACGCGCTGCGACGACGTGGCGCGTCCCTTTTTTGTAGGCGTTTCATGTCTGTC GCGCTGGGGGCGCGCGACGC
Product: putative DNA-binding stress protein (oxydative damage protectant)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSKAKSDKTAPELDTPTDLSPDAVNKIQTALNTLLADAFALYLKTKNFHWHVSGRHFHDYHEMLDEQSDAIFATTDQLAE RVRKLGGTTLKSISQISKLQTIKDNNEEYVPPREMLRELMEDNKHIAAAMRKAHELCDDNDDPATAGLLENFIDETERRT WFLFEASRQEGSNAA
Sequences:
>Translated_175_residues MSKAKSDKTAPELDTPTDLSPDAVNKIQTALNTLLADAFALYLKTKNFHWHVSGRHFHDYHEMLDEQSDAIFATTDQLAE RVRKLGGTTLKSISQISKLQTIKDNNEEYVPPREMLRELMEDNKHIAAAMRKAHELCDDNDDPATAGLLENFIDETERRT WFLFEASRQEGSNAA >Mature_174_residues SKAKSDKTAPELDTPTDLSPDAVNKIQTALNTLLADAFALYLKTKNFHWHVSGRHFHDYHEMLDEQSDAIFATTDQLAER VRKLGGTTLKSISQISKLQTIKDNNEEYVPPREMLRELMEDNKHIAAAMRKAHELCDDNDDPATAGLLENFIDETERRTW FLFEASRQEGSNAA
Specific function: Forms highly stable, multimeric protein-DNA complexes which accumulate in stationary-phase cells and protect against oxidative killing [H]
COG id: COG0783
COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dps family [H]
Homologues:
None
Paralogues:
None
Copy number: 6720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002177 - InterPro: IPR023188 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 19877; Mature: 19746
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKAKSDKTAPELDTPTDLSPDAVNKIQTALNTLLADAFALYLKTKNFHWHVSGRHFHDY CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHH HEMLDEQSDAIFATTDQLAERVRKLGGTTLKSISQISKLQTIKDNNEEYVPPREMLRELM HHHHHCCCCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH EDNKHIAAAMRKAHELCDDNDDPATAGLLENFIDETERRTWFLFEASRQEGSNAA HCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC >Mature Secondary Structure SKAKSDKTAPELDTPTDLSPDAVNKIQTALNTLLADAFALYLKTKNFHWHVSGRHFHDY CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHH HEMLDEQSDAIFATTDQLAERVRKLGGTTLKSISQISKLQTIKDNNEEYVPPREMLRELM HHHHHCCCCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH EDNKHIAAAMRKAHELCDDNDDPATAGLLENFIDETERRTWFLFEASRQEGSNAA HCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8396117; 9353931; 9384377; 8709848 [H]