| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is xcpT [H]
Identifier: 146338383
GI number: 146338383
Start: 1388095
End: 1388586
Strand: Direct
Name: xcpT [H]
Synonym: BRADO1295
Alternate gene names: 146338383
Gene position: 1388095-1388586 (Clockwise)
Preceding gene: 146338382
Following gene: 146338384
Centisome position: 18.62
GC content: 62.8
Gene sequence:
>492_bases ATGAAGCGTCGGATGACACAGGCAGGACTGAGCGGCGCCGCGCGGCAGGCGCGCAGCGACAGAGATGATCATGAGAGCGG CTTCACGCTCGTCGAGATGCTGGTCGTCATCGCCATCATCGGGATGATCATGGGCCTGATCGGTCCGCGCGTGCTGACAT CGCTGAACGAATCCCGGGTCAAGACCGCGCGGATTCAGATCCAGAGTTTTTCCAGCGCGCTTGATCTGTTCTATCTCGAC ACCGGTCGCTATCCGACCTCATCCGAGGGATTGGCGGCGCTGGTCCGGCCGGCCGCGTCCATCCCAGGCTGGGCCGGACC GTATCTCAAGGGAGGCAACGTTCCGAGCGATCCCTGGAGCCATCCCTACGTCTATCGCGCGCCGGGACAGCACGTGCCGT ATGAAATCGTATCGTATGGATCAGACGGTCAGGAGGGCGGCGTCGATCTCGCGGCGGACATTTCGTCGACGGCAACGGTC GGTGCCAGATAG
Upstream 100 bases:
>100_bases CCCCGCGGCCATCATACTCATCAGTACCGTCGTCGGCGGCCTCATCGTATCGGTGATGACCGCGCTGTTGTCGGTCACTC AACTCGTCGGGTAGCGGAAG
Downstream 100 bases:
>100_bases CGATGACGCGGGGCGACGGCAACGAGGCCGGCTTTACCTTGATCGAAATGATGTGCGCGCTCGCGATCGTCGCCACGTTG GCGGCCGTGCTGCTGCCCGC
Product: putative general secretion pathway protein G (PilD-dependent protein pddA)
Products: NA
Alternate protein names: PilD-dependent protein pddA [H]
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MKRRMTQAGLSGAARQARSDRDDHESGFTLVEMLVVIAIIGMIMGLIGPRVLTSLNESRVKTARIQIQSFSSALDLFYLD TGRYPTSSEGLAALVRPAASIPGWAGPYLKGGNVPSDPWSHPYVYRAPGQHVPYEIVSYGSDGQEGGVDLAADISSTATV GAR
Sequences:
>Translated_163_residues MKRRMTQAGLSGAARQARSDRDDHESGFTLVEMLVVIAIIGMIMGLIGPRVLTSLNESRVKTARIQIQSFSSALDLFYLD TGRYPTSSEGLAALVRPAASIPGWAGPYLKGGNVPSDPWSHPYVYRAPGQHVPYEIVSYGSDGQEGGVDLAADISSTATV GAR >Mature_163_residues MKRRMTQAGLSGAARQARSDRDDHESGFTLVEMLVVIAIIGMIMGLIGPRVLTSLNESRVKTARIQIQSFSSALDLFYLD TGRYPTSSEGLAALVRPAASIPGWAGPYLKGGNVPSDPWSHPYVYRAPGQHVPYEIVSYGSDGQEGGVDLAADISSTATV GAR
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP G family [H]
Homologues:
Organism=Escherichia coli, GI1789725, Length=130, Percent_Identity=38.4615384615385, Blast_Score=82, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000983 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR013545 - InterPro: IPR010054 [H]
Pfam domain/function: PF08334 GSPII_G; PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 17396; Mature: 17396
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRMTQAGLSGAARQARSDRDDHESGFTLVEMLVVIAIIGMIMGLIGPRVLTSLNESRV CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH KTARIQIQSFSSALDLFYLDTGRYPTSSEGLAALVRPAASIPGWAGPYLKGGNVPSDPWS HHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC HPYVYRAPGQHVPYEIVSYGSDGQEGGVDLAADISSTATVGAR CCEEECCCCCCCCHHEEECCCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MKRRMTQAGLSGAARQARSDRDDHESGFTLVEMLVVIAIIGMIMGLIGPRVLTSLNESRV CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH KTARIQIQSFSSALDLFYLDTGRYPTSSEGLAALVRPAASIPGWAGPYLKGGNVPSDPWS HHHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC HPYVYRAPGQHVPYEIVSYGSDGQEGGVDLAADISSTATVGAR CCEEECCCCCCCCHHEEECCCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1588814; 1309616; 10984043 [H]