| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146338355
Identifier: 146338355
GI number: 146338355
Start: 1353496
End: 1354143
Strand: Direct
Name: 146338355
Synonym: BRADO1264
Alternate gene names: NA
Gene position: 1353496-1354143 (Clockwise)
Preceding gene: 146338354
Following gene: 146338356
Centisome position: 18.15
GC content: 64.51
Gene sequence:
>648_bases ATGAGCACGCTGCAGAATTTGACCGACCATGCACGGCCCGTCGGAGGCTCCCGTCATGACGAGAACACCGTGTGGCTGCG GCTGCGAAACGAGACCCGCGCCGCGCACGAATCGATCGAGAAGAACGGCTGCCTGAAGCGGCTGTTGGCGGACGATCTGA CGCGATCCGAATATGCCGGTATCCTGCGCAGGCTCACCGCCTTCTATGTGCCTGTCGAACGCGAGTGGCTGCGTTGGGCC GAGCAGCTTCCTGCCGCCCTCGAGCTTGAAGCCCGCGCCGGCAAGGCCGCCTTGCTGTTCGCCGATCTCGCTGCCCTGCA GGCGCCCGCTCCCGACCGGGCGGCTTACGCCGATTTCGCGCCCTTCGATGCCGTCGAGCAGGCGTGGGGCTGCATCTACG TGATCGAGGGCTCCACGATGGGAGGGCAGCTCATCGCGCGATCGCTGCTGCAGACTCTGAAGGTCACGAGCGGCAATGGC GCGTCGTTCTATTCTCCGTATGGGACCGACGTCGGAGCAAAATGGCAAGCCTTCAAGAAGGCGATGAGCCGGGCGGTCGA CGATCAGAACCTCGATCTGGACAAGATGATCGACGGCGCGCAGCGGACCTTCTCGGCGCTCGACCGCTGGATGGCTGCCG ATCAATGA
Upstream 100 bases:
>100_bases GATGACACCACCGCGCAGCTGTTCGGCGCCGATCTCGGCCGTTGGGCCACGATTCACACCGCCGCGCGAAGAACGACAGT AACATCCAAGGCTGCAAGAC
Downstream 100 bases:
>100_bases GTGATGGGGACGACGGCGACGACTTGATCTGCGATCTGCAGCACGCGGCCGAAGACTTCGCGGCGGATTTGCGCGCCGTG CCGGCGCTGGAGCGCGTACG
Product: putative bacteriophytochrome heme oxygenase, BphO-like
Products: NA
Alternate protein names: Heme Oxygenase; Bacteriophytochrome Heme Oxygenase BphO-Like
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MSTLQNLTDHARPVGGSRHDENTVWLRLRNETRAAHESIEKNGCLKRLLADDLTRSEYAGILRRLTAFYVPVEREWLRWA EQLPAALELEARAGKAALLFADLAALQAPAPDRAAYADFAPFDAVEQAWGCIYVIEGSTMGGQLIARSLLQTLKVTSGNG ASFYSPYGTDVGAKWQAFKKAMSRAVDDQNLDLDKMIDGAQRTFSALDRWMAADQ
Sequences:
>Translated_215_residues MSTLQNLTDHARPVGGSRHDENTVWLRLRNETRAAHESIEKNGCLKRLLADDLTRSEYAGILRRLTAFYVPVEREWLRWA EQLPAALELEARAGKAALLFADLAALQAPAPDRAAYADFAPFDAVEQAWGCIYVIEGSTMGGQLIARSLLQTLKVTSGNG ASFYSPYGTDVGAKWQAFKKAMSRAVDDQNLDLDKMIDGAQRTFSALDRWMAADQ >Mature_214_residues STLQNLTDHARPVGGSRHDENTVWLRLRNETRAAHESIEKNGCLKRLLADDLTRSEYAGILRRLTAFYVPVEREWLRWAE QLPAALELEARAGKAALLFADLAALQAPAPDRAAYADFAPFDAVEQAWGCIYVIEGSTMGGQLIARSLLQTLKVTSGNGA SFYSPYGTDVGAKWQAFKKAMSRAVDDQNLDLDKMIDGAQRTFSALDRWMAADQ
Specific function: Unknown
COG id: COG3230
COG function: function code P; Heme oxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23821; Mature: 23690
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLQNLTDHARPVGGSRHDENTVWLRLRNETRAAHESIEKNGCLKRLLADDLTRSEYAG CCHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILRRLTAFYVPVEREWLRWAEQLPAALELEARAGKAALLFADLAALQAPAPDRAAYADFA HHHHHHHHHCCCHHHHHHHHHHCCHHEEHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC PFDAVEQAWGCIYVIEGSTMGGQLIARSLLQTLKVTSGNGASFYSPYGTDVGAKWQAFKK CHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH AMSRAVDDQNLDLDKMIDGAQRTFSALDRWMAADQ HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STLQNLTDHARPVGGSRHDENTVWLRLRNETRAAHESIEKNGCLKRLLADDLTRSEYAG CHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILRRLTAFYVPVEREWLRWAEQLPAALELEARAGKAALLFADLAALQAPAPDRAAYADFA HHHHHHHHHCCCHHHHHHHHHHCCHHEEHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC PFDAVEQAWGCIYVIEGSTMGGQLIARSLLQTLKVTSGNGASFYSPYGTDVGAKWQAFKK CHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH AMSRAVDDQNLDLDKMIDGAQRTFSALDRWMAADQ HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA