| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338277
Identifier: 146338277
GI number: 146338277
Start: 1253580
End: 1256189
Strand: Direct
Name: 146338277
Synonym: BRADO1181
Alternate gene names: NA
Gene position: 1253580-1256189 (Clockwise)
Preceding gene: 146338276
Following gene: 146338278
Centisome position: 16.81
GC content: 67.7
Gene sequence:
>2610_bases TTGAGACGACAGGCCCGGTTCGCAGCCGGGCTTTTCGTTGTCTGCAACCCATTGTCGTTGTTAACGAATGCTCAAAGGCT GGGTATTCGGATGATGACGATTTTGGGTGCGGCGCGCTCTCCTGCGGGCCTGTTTTTCAGTGTGTCCTTCGTCGGCCTGG CCGCGTTTGGCGGTCGCGAGGCAGCGGCGCAGGGCGTTTTCGATGCGGCCGCCGCCGGGCCGTTCACCTCGAGCTTTTTC GGTGAGGCGACCTATGCCACCGGCAGCAGCTGCTTCGGGAGCTATGTCCGCTCCGGCGGGATGAGCGCCTCCGGCCTGGC GGTGGGCAGTGCCGGCAAGGTTTGCGAAACGCCCTACATCTCGGTGAATGCGGTCGAGGTGCCGATCATCTGGACTTTCG GCGGCGCCGGTCTCGACTCCGGCGGCGTGACCGAGCTGGCGCTGCCGACTGCGCGGCTCGACAATTTCGCCAGCGGTGCG GCGACGGGCGTCGATGCGGCGGGCAAGACCGTCGTTGGTGTCGTGCTCGGCGCCGACAGCACCCAGACCTATTACGATAT CTACCCTTATGTCTGGCAGGCGACGACCGCCGGCGCCTTCACCGGCGTCGTGCCGACGCAGCTTCCGCTGCACGGGGCCG ACAGCGATGGCGCGGCGTATGGCATCAGTCCGAACGGCAGCTATGCGACCGGCTGGAGCGGTACTCTGCAGTTCGACGCG GCCTGGCCGCATCGGATCACGACGAGCACCAGCACGATGCAGGCGGCCGTCTGGACTCTCGCGTCCAATTCGGTGCAACT GCTCGGCGCCACGCCGGACCCCGTCAACTCGCCTGCAAGCTCGGGCAAGGCGGTAGCCGACAACGGCACGGTGGTCGGCT GGTACGGACTGTTCCCGCGCGACGCTTTCACCAATGACGTCAACCTGGCGCGCGGCTCGGGCCTCTTGCTGTCGGACATC AGCGGTTACGGCGACTACGCCACGATCTGGCAGCCGAAGCCGTTCGTCTGGACGCTCGCCTCGGGCATCATGACCCGGCT CGGCATGACGCCGCTGAACGACAGCGCAACGACCTACGCCTATGGCGAAGCGCGGGCGCTGAACGCCGGGACCGGCAGCG TTGCCACCGCGAGCGTCGCGGTCGGCTGGCTCGGCAATTCGGCCAGCAGTTTCGAGGCGGTGCGCTGGAGCTCCACCGAC AATTGGGCGACGCATTCCACCCTGCAGCTCGCCGCGGTCGCGCCGACCGATGCGGACAATCTCGGCCGCATCGGTGCGGT CGCCAATGCCGTCGACGCCTCCGGCAACAACGTGGTCGGGCGTGTCGAATATGCCTGCACGGCGAGCAGCAGCGGCTCCT GCTCGCAGGCGGTCTATTGGTCGGTGTCCGCCGACGGCCAGTCCTCGTCGGGCGCCACGCTGGCCTCGATCCTGGCGAGC GTCGGCATCAGTACCAGCAATGTCACGCTGACCGACGCGACTGCCATTGCGGTGTCCACGACCAGCTCGTCCTCACAAAT CCTCATCCTTGGCAACGGCACTCGCAACGATCCAGGGAGCACGCAGGACCTGTTCCTGATCAAGCTGGACCGCGTATCGT CGAGCACTCCGGCGACCTCTGGCGGCATCACCAGCGTTCTGGAGCAGCGGAGCTCGCTCGGGAGCCTCGGCGTCGTCGCC AACCAGGGCGTCACCGCGACCGACGCCGCGATGGGCGCGCTCGCGACCGCCGCGGACTACTATCGTTGTGTGAGGACAGC GGCCGGCGAGGCCTCACAATGGTGCGGCTTCGCTTATGGCCTGGTCGCCGGCAACTCCAGTTACGGCACCAGCGGCACCG AACTGTCGGGCAGCTTCGGTCTCGCCCGCGCGATTGGGCCCTCGACGTCGATCGGCTTCAGCGTCGGCGTCTCGGGCCTG CGCAACGGCCTCGCCTCTGGCGGCCGCTTCGACGCGCCGGGGGCGACATTCGGGACGTACTTCGCGCACCGCCCGGACAC CGGCTTTCAGTTTCTGGCGATGGCGGTGGCCTCGCTCTATCCCGACCTGACGCTCACCCGCGGCTATCTCAACGGCACGA TGCTGACGAATTCGCAAGGCGCGACCCATGCGAGTTCGGCGGGCGCGATGGCGCGAATCGGCTGGGCCTTTGCAGTCGCT GGCCTCAAGGCGACAGTCACGCCCTACGCGCAGCTGTCTCACGTCAATGCGCGCGTCGGCGGCTTCGTCGAGAATGGCGG CCTGTTCCCGGCGTCCATCTCCGCGTTCAATGCGGCGGCAACGACCTTGCGCGTCGGCGCGCAATTGCGCGGCTCGCTGA CGGAGCGGCTCTCGGCGTTCGGCGGTCTCGCCTGGGCCGGCAATCTCCGCAATGACGCGCCTGCCGTGCAAGGCTCGCTG CTGGCGGCGGATTGCAATAGCACCTCGCCGCTCACGGCGTTCTGCGGAATGTCCGGGCTCGGTCCGCGCCTGAGCCGGAG CTGGGTCGAGGGCAGTGCCGGCTTGCGCTACGAGCTCGCGCAGGGCTCGGCGGCGATGATCAGCGCCAATGCCGCCAGCC AGAACACGCTGACCTACGGCCTCCAGGTCGGCTACAGCCGCGCCTTCTGA
Upstream 100 bases:
>100_bases CCGCGTCCCGATCCGGATCCCGGCCTCGAGCCGCAGCCCCAGGCCTGATCGGGGCGGGGGCGCGGCCGACCCGCGGGGGC CGATACGGAACATCAAGAGA
Downstream 100 bases:
>100_bases GCGCGGCGCCGGGGCCGGTTTGCGCTTAAGCCTTCTTCAAGCCTCCCGGCCTATGGCTTGATTGGAGTTGCGCCCGTGCC GGCGCGGGCGAGGTTCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 869; Mature: 869
Protein sequence:
>869_residues MRRQARFAAGLFVVCNPLSLLTNAQRLGIRMMTILGAARSPAGLFFSVSFVGLAAFGGREAAAQGVFDAAAAGPFTSSFF GEATYATGSSCFGSYVRSGGMSASGLAVGSAGKVCETPYISVNAVEVPIIWTFGGAGLDSGGVTELALPTARLDNFASGA ATGVDAAGKTVVGVVLGADSTQTYYDIYPYVWQATTAGAFTGVVPTQLPLHGADSDGAAYGISPNGSYATGWSGTLQFDA AWPHRITTSTSTMQAAVWTLASNSVQLLGATPDPVNSPASSGKAVADNGTVVGWYGLFPRDAFTNDVNLARGSGLLLSDI SGYGDYATIWQPKPFVWTLASGIMTRLGMTPLNDSATTYAYGEARALNAGTGSVATASVAVGWLGNSASSFEAVRWSSTD NWATHSTLQLAAVAPTDADNLGRIGAVANAVDASGNNVVGRVEYACTASSSGSCSQAVYWSVSADGQSSSGATLASILAS VGISTSNVTLTDATAIAVSTTSSSSQILILGNGTRNDPGSTQDLFLIKLDRVSSSTPATSGGITSVLEQRSSLGSLGVVA NQGVTATDAAMGALATAADYYRCVRTAAGEASQWCGFAYGLVAGNSSYGTSGTELSGSFGLARAIGPSTSIGFSVGVSGL RNGLASGGRFDAPGATFGTYFAHRPDTGFQFLAMAVASLYPDLTLTRGYLNGTMLTNSQGATHASSAGAMARIGWAFAVA GLKATVTPYAQLSHVNARVGGFVENGGLFPASISAFNAAATTLRVGAQLRGSLTERLSAFGGLAWAGNLRNDAPAVQGSL LAADCNSTSPLTAFCGMSGLGPRLSRSWVEGSAGLRYELAQGSAAMISANAASQNTLTYGLQVGYSRAF
Sequences:
>Translated_869_residues MRRQARFAAGLFVVCNPLSLLTNAQRLGIRMMTILGAARSPAGLFFSVSFVGLAAFGGREAAAQGVFDAAAAGPFTSSFF GEATYATGSSCFGSYVRSGGMSASGLAVGSAGKVCETPYISVNAVEVPIIWTFGGAGLDSGGVTELALPTARLDNFASGA ATGVDAAGKTVVGVVLGADSTQTYYDIYPYVWQATTAGAFTGVVPTQLPLHGADSDGAAYGISPNGSYATGWSGTLQFDA AWPHRITTSTSTMQAAVWTLASNSVQLLGATPDPVNSPASSGKAVADNGTVVGWYGLFPRDAFTNDVNLARGSGLLLSDI SGYGDYATIWQPKPFVWTLASGIMTRLGMTPLNDSATTYAYGEARALNAGTGSVATASVAVGWLGNSASSFEAVRWSSTD NWATHSTLQLAAVAPTDADNLGRIGAVANAVDASGNNVVGRVEYACTASSSGSCSQAVYWSVSADGQSSSGATLASILAS VGISTSNVTLTDATAIAVSTTSSSSQILILGNGTRNDPGSTQDLFLIKLDRVSSSTPATSGGITSVLEQRSSLGSLGVVA NQGVTATDAAMGALATAADYYRCVRTAAGEASQWCGFAYGLVAGNSSYGTSGTELSGSFGLARAIGPSTSIGFSVGVSGL RNGLASGGRFDAPGATFGTYFAHRPDTGFQFLAMAVASLYPDLTLTRGYLNGTMLTNSQGATHASSAGAMARIGWAFAVA GLKATVTPYAQLSHVNARVGGFVENGGLFPASISAFNAAATTLRVGAQLRGSLTERLSAFGGLAWAGNLRNDAPAVQGSL LAADCNSTSPLTAFCGMSGLGPRLSRSWVEGSAGLRYELAQGSAAMISANAASQNTLTYGLQVGYSRAF >Mature_869_residues MRRQARFAAGLFVVCNPLSLLTNAQRLGIRMMTILGAARSPAGLFFSVSFVGLAAFGGREAAAQGVFDAAAAGPFTSSFF GEATYATGSSCFGSYVRSGGMSASGLAVGSAGKVCETPYISVNAVEVPIIWTFGGAGLDSGGVTELALPTARLDNFASGA ATGVDAAGKTVVGVVLGADSTQTYYDIYPYVWQATTAGAFTGVVPTQLPLHGADSDGAAYGISPNGSYATGWSGTLQFDA AWPHRITTSTSTMQAAVWTLASNSVQLLGATPDPVNSPASSGKAVADNGTVVGWYGLFPRDAFTNDVNLARGSGLLLSDI SGYGDYATIWQPKPFVWTLASGIMTRLGMTPLNDSATTYAYGEARALNAGTGSVATASVAVGWLGNSASSFEAVRWSSTD NWATHSTLQLAAVAPTDADNLGRIGAVANAVDASGNNVVGRVEYACTASSSGSCSQAVYWSVSADGQSSSGATLASILAS VGISTSNVTLTDATAIAVSTTSSSSQILILGNGTRNDPGSTQDLFLIKLDRVSSSTPATSGGITSVLEQRSSLGSLGVVA NQGVTATDAAMGALATAADYYRCVRTAAGEASQWCGFAYGLVAGNSSYGTSGTELSGSFGLARAIGPSTSIGFSVGVSGL RNGLASGGRFDAPGATFGTYFAHRPDTGFQFLAMAVASLYPDLTLTRGYLNGTMLTNSQGATHASSAGAMARIGWAFAVA GLKATVTPYAQLSHVNARVGGFVENGGLFPASISAFNAAATTLRVGAQLRGSLTERLSAFGGLAWAGNLRNDAPAVQGSL LAADCNSTSPLTAFCGMSGLGPRLSRSWVEGSAGLRYELAQGSAAMISANAASQNTLTYGLQVGYSRAF
Specific function: Unknown
COG id: COG5563
COG function: function code S; Predicted integral membrane proteins containing uncharacterized repeats
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 87960; Mature: 87960
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRQARFAAGLFVVCNPLSLLTNAQRLGIRMMTILGAARSPAGLFFSVSFVGLAAFGGRE CCCCHHHHCCEEEEECCHHHHHCHHHHCEEEEHHHHCCCCCCCEEEEEEEHHHHHCCCCH AAAQGVFDAAAAGPFTSSFFGEATYATGSSCFGSYVRSGGMSASGLAVGSAGKVCETPYI HHHHCHHHHHCCCCCCHHHCCCEEECCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEE SVNAVEVPIIWTFGGAGLDSGGVTELALPTARLDNFASGAATGVDAAGKTVVGVVLGADS EEEEEEEEEEEEECCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCEEEEEEEECCC TQTYYDIYPYVWQATTAGAFTGVVPTQLPLHGADSDGAAYGISPNGSYATGWSGTLQFDA CCEEEEECCEEEEECCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCEEEECC AWPHRITTSTSTMQAAVWTLASNSVQLLGATPDPVNSPASSGKAVADNGTVVGWYGLFPR CCCCEEECCCCHHHEEEEEEECCCEEEEECCCCCCCCCCCCCCEEECCCCEEEEECCCCC DAFTNDVNLARGSGLLLSDISGYGDYATIWQPKPFVWTLASGIMTRLGMTPLNDSATTYA CCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEE YGEARALNAGTGSVATASVAVGWLGNSASSFEAVRWSSTDNWATHSTLQLAAVAPTDADN ECCCEEECCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCC LGRIGAVANAVDASGNNVVGRVEYACTASSSGSCSQAVYWSVSADGQSSSGATLASILAS CCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH VGISTSNVTLTDATAIAVSTTSSSSQILILGNGTRNDPGSTQDLFLIKLDRVSSSTPATS HCCCCCCEEEEECEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCC GGITSVLEQRSSLGSLGVVANQGVTATDAAMGALATAADYYRCVRTAAGEASQWCGFAYG CCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEE LVAGNSSYGTSGTELSGSFGLARAIGPSTSIGFSVGVSGLRNGLASGGRFDAPGATFGTY EEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH FAHRPDTGFQFLAMAVASLYPDLTLTRGYLNGTMLTNSQGATHASSAGAMARIGWAFAVA EECCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH GLKATVTPYAQLSHVNARVGGFVENGGLFPASISAFNAAATTLRVGAQLRGSLTERLSAF CCEEECCCHHHHHHCCHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLAWAGNLRNDAPAVQGSLLAADCNSTSPLTAFCGMSGLGPRLSRSWVEGSAGLRYELA CCEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCEEEEC QGSAAMISANAASQNTLTYGLQVGYSRAF CCCEEEEEECCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MRRQARFAAGLFVVCNPLSLLTNAQRLGIRMMTILGAARSPAGLFFSVSFVGLAAFGGRE CCCCHHHHCCEEEEECCHHHHHCHHHHCEEEEHHHHCCCCCCCEEEEEEEHHHHHCCCCH AAAQGVFDAAAAGPFTSSFFGEATYATGSSCFGSYVRSGGMSASGLAVGSAGKVCETPYI HHHHCHHHHHCCCCCCHHHCCCEEECCCHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEE SVNAVEVPIIWTFGGAGLDSGGVTELALPTARLDNFASGAATGVDAAGKTVVGVVLGADS EEEEEEEEEEEEECCCCCCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCEEEEEEEECCC TQTYYDIYPYVWQATTAGAFTGVVPTQLPLHGADSDGAAYGISPNGSYATGWSGTLQFDA CCEEEEECCEEEEECCCCCEECCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCEEEECC AWPHRITTSTSTMQAAVWTLASNSVQLLGATPDPVNSPASSGKAVADNGTVVGWYGLFPR CCCCEEECCCCHHHEEEEEEECCCEEEEECCCCCCCCCCCCCCEEECCCCEEEEECCCCC DAFTNDVNLARGSGLLLSDISGYGDYATIWQPKPFVWTLASGIMTRLGMTPLNDSATTYA CCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCEEE YGEARALNAGTGSVATASVAVGWLGNSASSFEAVRWSSTDNWATHSTLQLAAVAPTDADN ECCCEEECCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCC LGRIGAVANAVDASGNNVVGRVEYACTASSSGSCSQAVYWSVSADGQSSSGATLASILAS CCCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH VGISTSNVTLTDATAIAVSTTSSSSQILILGNGTRNDPGSTQDLFLIKLDRVSSSTPATS HCCCCCCEEEEECEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCCC GGITSVLEQRSSLGSLGVVANQGVTATDAAMGALATAADYYRCVRTAAGEASQWCGFAYG CCHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEE LVAGNSSYGTSGTELSGSFGLARAIGPSTSIGFSVGVSGLRNGLASGGRFDAPGATFGTY EEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH FAHRPDTGFQFLAMAVASLYPDLTLTRGYLNGTMLTNSQGATHASSAGAMARIGWAFAVA EECCCCCCHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH GLKATVTPYAQLSHVNARVGGFVENGGLFPASISAFNAAATTLRVGAQLRGSLTERLSAF CCEEECCCHHHHHHCCHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGLAWAGNLRNDAPAVQGSLLAADCNSTSPLTAFCGMSGLGPRLSRSWVEGSAGLRYELA CCEEEECCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCCCHHHHHHHHCCCCCCEEEEC QGSAAMISANAASQNTLTYGLQVGYSRAF CCCEEEEEECCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA