| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338264
Identifier: 146338264
GI number: 146338264
Start: 1239231
End: 1239956
Strand: Direct
Name: 146338264
Synonym: BRADO1168
Alternate gene names: NA
Gene position: 1239231-1239956 (Clockwise)
Preceding gene: 146338263
Following gene: 146338265
Centisome position: 16.62
GC content: 72.18
Gene sequence:
>726_bases ATGAGCTGGCGCAAGGAGCAGCGCCGCGCCGAGCGCGGCTATCATCACGGCAACCTCAAGGAGGCGCTGCTGCAGGCGGC GCTCGACCTTATTGCGCAGAAGGGGGCCGCCGGCTTCACCTTTGCCGATGCGGCCCGCATGGCGGGCGTCAGCCCGGCGG CGCCGTACCGGCATTTCCGCGATCGCGACGAACTGCTGTCGAGCATCGCGCAGCGCGGCTTCGAGCAGTTCGAGGCGCGG CTCTCGGCTGCCTGGGACGACGGCCGCCCCGACACGGTCACCGCGTTCGAGCGCGTCGGCAAGGCGTATCTCGCCTTCGC CCGCGAGGAGCCGGCGTTCTATTCGGCGATGTTCGAATCCGGCGTGCCGGCCGACTCGACGGCAGGTCTGCAGGCGGCCG GCGAGCGCGCGTTCGGCGTGATCCGCGCGGCCGCGGAGCGGCTCGCCGCTTTGGCGCCGCCCGGCGTGCCGCGGCCGCCG GCGATGATGATGGCGCTGCACATCTGGTCGATGGCCCACGGCATCGCCTCGCTGTTTGCGCGCGGCGACGCCGCCCGGCG CAAGCTGCCGATGTCGCCGGAGGAACTCCTCGAAGCCGAGGTGCTGATCTATCTGCGTGGGCTCGGCTTCAGCACGGATC GTCAGCCGGCCGCCAAGCCTGGCGGCGAGCCGCCGCCATTGCCGGAGGACGAGAAGCCGGCGGGGCCCTGGGGCCGGCCG AAATAA
Upstream 100 bases:
>100_bases AAAGAGTAGGAGAACACCTGCGGCAGGGCGAAGACCGGCCAATGTGAACGCCCAAAAGCTTCTGGCTTGTTCGCGCCCGG CTCATGTAAAAGCCCTTCAC
Downstream 100 bases:
>100_bases AGGTTCAACGGAGCGTGAGAAATATTCCGGGCGGCGCGTCAGGCGGCCGCCTTGACAAAATCCCGGGTTGGTCTAGCTAT GTAAATGTTATTTACATTCA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; AcrR Family Transcriptional Regulator; Regulatory Protein Tetr; Transcriptional Regulator TetR-Family; TetR-Family Protein Transcriptional Regulator
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MSWRKEQRRAERGYHHGNLKEALLQAALDLIAQKGAAGFTFADAARMAGVSPAAPYRHFRDRDELLSSIAQRGFEQFEAR LSAAWDDGRPDTVTAFERVGKAYLAFAREEPAFYSAMFESGVPADSTAGLQAAGERAFGVIRAAAERLAALAPPGVPRPP AMMMALHIWSMAHGIASLFARGDAARRKLPMSPEELLEAEVLIYLRGLGFSTDRQPAAKPGGEPPPLPEDEKPAGPWGRP K
Sequences:
>Translated_241_residues MSWRKEQRRAERGYHHGNLKEALLQAALDLIAQKGAAGFTFADAARMAGVSPAAPYRHFRDRDELLSSIAQRGFEQFEAR LSAAWDDGRPDTVTAFERVGKAYLAFAREEPAFYSAMFESGVPADSTAGLQAAGERAFGVIRAAAERLAALAPPGVPRPP AMMMALHIWSMAHGIASLFARGDAARRKLPMSPEELLEAEVLIYLRGLGFSTDRQPAAKPGGEPPPLPEDEKPAGPWGRP K >Mature_240_residues SWRKEQRRAERGYHHGNLKEALLQAALDLIAQKGAAGFTFADAARMAGVSPAAPYRHFRDRDELLSSIAQRGFEQFEARL SAAWDDGRPDTVTAFERVGKAYLAFAREEPAFYSAMFESGVPADSTAGLQAAGERAFGVIRAAAERLAALAPPGVPRPPA MMMALHIWSMAHGIASLFARGDAARRKLPMSPEELLEAEVLIYLRGLGFSTDRQPAAKPGGEPPPLPEDEKPAGPWGRPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26164; Mature: 26033
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWRKEQRRAERGYHHGNLKEALLQAALDLIAQKGAAGFTFADAARMAGVSPAAPYRHFR CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHC DRDELLSSIAQRGFEQFEARLSAAWDDGRPDTVTAFERVGKAYLAFAREEPAFYSAMFES CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC GVPADSTAGLQAAGERAFGVIRAAAERLAALAPPGVPRPPAMMMALHIWSMAHGIASLFA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RGDAARRKLPMSPEELLEAEVLIYLRGLGFSTDRQPAAKPGGEPPPLPEDEKPAGPWGRP HCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC K C >Mature Secondary Structure SWRKEQRRAERGYHHGNLKEALLQAALDLIAQKGAAGFTFADAARMAGVSPAAPYRHFR CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHC DRDELLSSIAQRGFEQFEARLSAAWDDGRPDTVTAFERVGKAYLAFAREEPAFYSAMFES CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC GVPADSTAGLQAAGERAFGVIRAAAERLAALAPPGVPRPPAMMMALHIWSMAHGIASLFA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RGDAARRKLPMSPEELLEAEVLIYLRGLGFSTDRQPAAKPGGEPPPLPEDEKPAGPWGRP HCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA