Click here to switch to the map view.

The map label for this gene is 146338232

Identifier: 146338232

GI number: 146338232

Start: 1208016

End: 1209071

Strand: Reverse

Name: 146338232

Synonym: BRADO1132

Alternate gene names: NA

Gene position: 1209071-1208016 (Counterclockwise)

Preceding gene: 146338233

Following gene: 146338229

Centisome position: 16.21

GC content: 65.62

Gene sequence:

>1056_bases
GTGTCCGACGAGACCGCGATCAAGGCCCGGATGAATCAGTGGACCGTCGGTCTCGCCGCCGGCCTGCCGGACGGCGGCTT
CGTGCGCTTTGCCAGCGAGATGGCGCGGACGATGGATGACGGCGACAATATGCGCCTCATCCCGATGGTGACGCGCGGCA
CGACGTCGAACATCGCCGATCTGCTGTACCTGCGCGGCGTCGACGTCGCCATCACCTATGCGGACGCCTTCGACTTCTAC
GCCAAGCAGGCCGGCCTCGCCAACATCAACGACCGCATTCGCTACGTGCTGCGCTTCTTCATCTCCGACGTGCACATCTA
TGCGCGCGAGGAGTTCAAGACGCTCCAGGACCTGAAGGGCCAGAAGATCGCGGTTGGCACGGCGGGGGTCGCGGCCGCGC
ACACCGGGCCTCTGATCTTCCGGCGGCTGGGCATCGACATCCAGCCGGTCGCGGTCGGCGGGCCAGTGGCGCTGGAGAAG
CTGCACAAGGGCGAGATCGCGGCCATGGTGTATGTCGCATCGAAGCCCGGCGAAGTGTTCAGCGGCATGAAGACCGCCGA
CCCTGGCTTCCACTTCGTGCCGATCCCCTACACCAAGCAGTTTGCGGACTTCTATTACCCGACGGCGATCAAGGCCGAGA
CCTACCCGGCGCTGCTGGCGCCGGACACATCGATCGAGACGATCGCGGTGCCTTCGGTGCTGGCGGTCTACAACTGGAAG
CCCGGCAGCGACCGCGCCGACCGCGTCAACCGCTTCGTCGACACGCTGTTCAGCAACCTCGGCCGGCTGCAGCAGCCGCC
GTTCCATCCTGGCTGGAAGGATCTCAACCTCGAGGCCCAGGTGCCCGGCTGGCAGCGCTATCCCTATGTCGAGACCGTGC
TGGAGCGCATGAAGAAGGACGCCGATATCGGCTTGCCGCCGGCGGCCACAGGCGGCCTGAGCCAGCAGCAGCGCTCTGAC
GCGTTTCTCGAATCGCAGGCCAAGGCGTCGTCGAAGGCCGAAAGGGACGAGCTGTATCGCTCGTTCCTGGAGTGGAGCAG
GAAGCAGCGGAAGTGA

Upstream 100 bases:

>100_bases
GACACCGCTGTCCCTGAAGCCCGTACCACCGGCACGCGCGCCGGTGCGGCGGCCCGCCGAATCTCGGGCCCTCGAACCGC
GTGCGCCGGAGACACGCAGC

Downstream 100 bases:

>100_bases
GGCTTTGTGCCGTCGTCGGGACAGAGCGCGGGGATCAGCTCAACAACAACGCCATCCCGGGATCGCCCTGGGCCATCGCG
CGCTGATAGGCTGGCCGGGC

Product: putative TRAP-type transport system protein, periplasmic component

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSDETAIKARMNQWTVGLAAGLPDGGFVRFASEMARTMDDGDNMRLIPMVTRGTTSNIADLLYLRGVDVAITYADAFDFY
AKQAGLANINDRIRYVLRFFISDVHIYAREEFKTLQDLKGQKIAVGTAGVAAAHTGPLIFRRLGIDIQPVAVGGPVALEK
LHKGEIAAMVYVASKPGEVFSGMKTADPGFHFVPIPYTKQFADFYYPTAIKAETYPALLAPDTSIETIAVPSVLAVYNWK
PGSDRADRVNRFVDTLFSNLGRLQQPPFHPGWKDLNLEAQVPGWQRYPYVETVLERMKKDADIGLPPAATGGLSQQQRSD
AFLESQAKASSKAERDELYRSFLEWSRKQRK

Sequences:

>Translated_351_residues
MSDETAIKARMNQWTVGLAAGLPDGGFVRFASEMARTMDDGDNMRLIPMVTRGTTSNIADLLYLRGVDVAITYADAFDFY
AKQAGLANINDRIRYVLRFFISDVHIYAREEFKTLQDLKGQKIAVGTAGVAAAHTGPLIFRRLGIDIQPVAVGGPVALEK
LHKGEIAAMVYVASKPGEVFSGMKTADPGFHFVPIPYTKQFADFYYPTAIKAETYPALLAPDTSIETIAVPSVLAVYNWK
PGSDRADRVNRFVDTLFSNLGRLQQPPFHPGWKDLNLEAQVPGWQRYPYVETVLERMKKDADIGLPPAATGGLSQQQRSD
AFLESQAKASSKAERDELYRSFLEWSRKQRK
>Mature_350_residues
SDETAIKARMNQWTVGLAAGLPDGGFVRFASEMARTMDDGDNMRLIPMVTRGTTSNIADLLYLRGVDVAITYADAFDFYA
KQAGLANINDRIRYVLRFFISDVHIYAREEFKTLQDLKGQKIAVGTAGVAAAHTGPLIFRRLGIDIQPVAVGGPVALEKL
HKGEIAAMVYVASKPGEVFSGMKTADPGFHFVPIPYTKQFADFYYPTAIKAETYPALLAPDTSIETIAVPSVLAVYNWKP
GSDRADRVNRFVDTLFSNLGRLQQPPFHPGWKDLNLEAQVPGWQRYPYVETVLERMKKDADIGLPPAATGGLSQQQRSDA
FLESQAKASSKAERDELYRSFLEWSRKQRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38977; Mature: 38846

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDETAIKARMNQWTVGLAAGLPDGGFVRFASEMARTMDDGDNMRLIPMVTRGTTSNIAD
CCCCHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHH
LLYLRGVDVAITYADAFDFYAKQAGLANINDRIRYVLRFFISDVHIYAREEFKTLQDLKG
HHHHCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QKIAVGTAGVAAAHTGPLIFRRLGIDIQPVAVGGPVALEKLHKGEIAAMVYVASKPGEVF
CEEEEECCCCHHHCCHHHHHHHHCCCEEEEECCCHHHHHHHCCCCEEEEEEEECCCCHHH
SGMKTADPGFHFVPIPYTKQFADFYYPTAIKAETYPALLAPDTSIETIAVPSVLAVYNWK
CCCCCCCCCCEEEECCCHHHHHHHHCCCEECCCCCCEEECCCCCCCEEECCCEEEEECCC
PGSDRADRVNRFVDTLFSNLGRLQQPPFHPGWKDLNLEAQVPGWQRYPYVETVLERMKKD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHC
ADIGLPPAATGGLSQQQRSDAFLESQAKASSKAERDELYRSFLEWSRKQRK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDETAIKARMNQWTVGLAAGLPDGGFVRFASEMARTMDDGDNMRLIPMVTRGTTSNIAD
CCCHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHH
LLYLRGVDVAITYADAFDFYAKQAGLANINDRIRYVLRFFISDVHIYAREEFKTLQDLKG
HHHHCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QKIAVGTAGVAAAHTGPLIFRRLGIDIQPVAVGGPVALEKLHKGEIAAMVYVASKPGEVF
CEEEEECCCCHHHCCHHHHHHHHCCCEEEEECCCHHHHHHHCCCCEEEEEEEECCCCHHH
SGMKTADPGFHFVPIPYTKQFADFYYPTAIKAETYPALLAPDTSIETIAVPSVLAVYNWK
CCCCCCCCCCEEEECCCHHHHHHHHCCCEECCCCCCEEECCCCCCCEEECCCEEEEECCC
PGSDRADRVNRFVDTLFSNLGRLQQPPFHPGWKDLNLEAQVPGWQRYPYVETVLERMKKD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHC
ADIGLPPAATGGLSQQQRSDAFLESQAKASSKAERDELYRSFLEWSRKQRK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA