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The map label for this gene is slyA [C]

Identifier: 146338202

GI number: 146338202

Start: 1172497

End: 1172976

Strand: Direct

Name: slyA [C]

Synonym: BRADO1101

Alternate gene names: 146338202

Gene position: 1172497-1172976 (Clockwise)

Preceding gene: 146338199

Following gene: 146338205

Centisome position: 15.72

GC content: 67.71

Gene sequence:

>480_bases
ATGTCCAAGACCGCGAGCGCACGGGCGCAACGAGCCGGAGCCGCCCAGGACCCGAGGATTCGTCTCGGTGAGCTCGACAA
TCATCTCGGCTATTTCGTCCGCCGCCTGCAGCACTGGATCTTCCGCGACGTCAATGCGGCGCTTGCGCCGCTGGAGCTCG
ACGTCATTCTCTATTCGATCCTGGAAACGATCACGGCCAATCCAGGCGCGACGCAGATCGCGATTGCGTGCGCGCTCGGC
ATCGAGCGCGCACGCATGGTCGCGCTGCTCGACGAACTGCAGCAGGCCGGGCTGATCGTGCGCGAGCGCTCCGCGCTGGA
CCGCCGCGCGCATGCGCTCGACCTGACCCAGCGCGGCCGCATGATCCTGAAGAAGGCGAACGTCGCGGTTGCTGCGCACG
AGAAGCGGGTGGCGCGCCGCCTCGGCGCCGAAAATTATCGCCGCGCGCTCGCGGCACTGGCGCAGTTCGAGGCGGACTAG

Upstream 100 bases:

>100_bases
AGTTGTGGTTTGCAATTATTGTGGGTGTGACCAATTGCGGCGGCTTGTGCGCGCGGCGGCGTCGGTCTAGGCAGGGGCGT
CCGACATCAGCGAGAGCCCT

Downstream 100 bases:

>100_bases
ACGTATTTCTGAAGGCACTGTCGCGAGCCTCCCGCCGCAGCAGTGCGCAGCGGCCACACGCAGCCGGCACGCGAACGCGG
TACTGACGCAAATCTATCTT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSKTASARAQRAGAAQDPRIRLGELDNHLGYFVRRLQHWIFRDVNAALAPLELDVILYSILETITANPGATQIAIACALG
IERARMVALLDELQQAGLIVRERSALDRRAHALDLTQRGRMILKKANVAVAAHEKRVARRLGAENYRRALAALAQFEAD

Sequences:

>Translated_159_residues
MSKTASARAQRAGAAQDPRIRLGELDNHLGYFVRRLQHWIFRDVNAALAPLELDVILYSILETITANPGATQIAIACALG
IERARMVALLDELQQAGLIVRERSALDRRAHALDLTQRGRMILKKANVAVAAHEKRVARRLGAENYRRALAALAQFEAD
>Mature_158_residues
SKTASARAQRAGAAQDPRIRLGELDNHLGYFVRRLQHWIFRDVNAALAPLELDVILYSILETITANPGATQIAIACALGI
ERARMVALLDELQQAGLIVRERSALDRRAHALDLTQRGRMILKKANVAVAAHEKRVARRLGAENYRRALAALAQFEAD

Specific function: May be involved in the regulation of genes for 4- hydroxybenzoyl-CoA reductase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 17602; Mature: 17470

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTASARAQRAGAAQDPRIRLGELDNHLGYFVRRLQHWIFRDVNAALAPLELDVILYSI
CCCCHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LETITANPGATQIAIACALGIERARMVALLDELQQAGLIVRERSALDRRAHALDLTQRGR
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
MILKKANVAVAAHEKRVARRLGAENYRRALAALAQFEAD
HHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKTASARAQRAGAAQDPRIRLGELDNHLGYFVRRLQHWIFRDVNAALAPLELDVILYSI
CCCHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LETITANPGATQIAIACALGIERARMVALLDELQQAGLIVRERSALDRRAHALDLTQRGR
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
MILKKANVAVAAHEKRVARRLGAENYRRALAALAQFEAD
HHHHHHCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9490068 [H]