| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338189
Identifier: 146338189
GI number: 146338189
Start: 1153805
End: 1155670
Strand: Reverse
Name: 146338189
Synonym: BRADO1087
Alternate gene names: NA
Gene position: 1155670-1153805 (Counterclockwise)
Preceding gene: 146338190
Following gene: 146338185
Centisome position: 15.5
GC content: 69.24
Gene sequence:
>1866_bases ATGGGTTGTCACGATTTGCCGCGCGACGGCTGCGGACGGGTGCGCATGTCAAAGCTGAAATCCATCCTGAAGCTGCTGAA CGAGCCCGGCCCGGCGGTCGTGCTGGCCGTTGTCGTCGCCATGCTGGTCGGCATCACTGGCCCGGCCTCGGCCCAATTCT TCAACTTCAACCCGTTTGCCTCGCCACGACCGGCGCCGCGCGGCGGCGGCGGTGGCGGAGGCTGGTTCGGCGGCGACTTC TTCTCACCCTACCAGCCGCAGCAACCCAAGAAGGTCATCCAGGATTATTCCAAGGCGCCGGCGCCGGAGAAGCGCGACAA TGCCGCCGCGCCCGAGCGCTACGTTCTGGTGCTCGGCGACGGCATGGCCGACTGGCTCGCCTATGGTCTCGAGGACGCCT ATTCCGAGCAGCCGGACATGGGCGTGACCCGCAAGATCAAGACCAATTCCGGCTTGATCAAGTACCAGCCCAAGGGCGAG CCGGCCGACTGGACCGCAGCCGCAAAGAGCATTCTGGCAACCGAGCGCGCCGACGCCATCGTGATCATGCTCGGCCTCAA CGACCGCCTCTCGATTCGCGAGCCGGCGGTCGAGAAGACCGACAAGCCGGACGACAAGAAGGCCGCGGCCGACAAGGCCA AGAAGGAGGCCAAGGCCAAGCCTGGGGATACGAAGCCGGGTGATGCCAAGGGAGCCGACGGCAAGCCGGGTGATGCGAAA TCCGGTGATGCCAAGTCCGACGCCAAGTCCGACGCCAAGTCCGACGCCAAGGCCGATCCGAAGAGCGACACGGCCGCCAA GCCGGCCGACAGCGAGCTGCCGCAGGACGAGGCCGACAACGATACGCCTGTCATCGCCGCCCCGGAGAAGACGCCGCGCG CGCCGGGCGCGCTGTACGAGTTTCGCGACGAGCGCTGGGTCGAGCTCTACACCAAGAAGATCGAGGAACTGATCGCGGTC GCCAAGAGCAAGGGCGTTCCGGTGCTGTGGGTGGGCCTCCCGGCCGTGCGCGGTCCGAAGGGCACGGCCGACATGCTGTT CCTGGATTCGCTGTATCGCGACGCCGCCGGCAAGGCCGGCATCACCTATGTCGACGTCTGGGACGGCTTCGTCGACGAAG CCGGGCGCTTCCTGCAGAAGGGCCCGGACTTCGAGGGCCAGATCCGCCAGCTGCGCTCCTATGACGGCGTCTATTTCACC AAGCCCGGCGCCCGCAAGCTTGCCCACTATGCCGAGCGCGAGATCAACCGGCTGCTGGCCGCCCGCTCCACGCCGCTGGA ACTGCCGACCGAGCCGGCGACCCCGGACGCCAATGCCGTTCCGGGTCAGCCGGCGCCGCGCCCGGTCGCCGGCCCGATTC TGCCGCTGGTCGCTTCGTCCGTCGGCACCGATCAGTTGCTGGGGGGACCCGGCTCACGCCCAGCGGCGGTGGATGCGCTG GCCTCGCGAACCCTGGTCAAGGGCGAGGCGCTGAGCCCGCCCGCAGGGCGTGCGGACGATTTCATCTGGCCGCGCCGTGA GGTCGGCCGCGAGCAGGCCAAGGAGCCGCCAAAGGAGCTCAACAAGCCGGATACGCCCGTCGCGGCGACATCGCCCACGG AGACGCAGCAAACGGCTCCCGGCCAGCTTCCGCCGCAGCAGCGGCCAAAGCGGCTGACGACCCCCGGGGCCCCGGGCCAA ACTCAACAGCCGAATCAGAACGGCCAGGCCGGCCAGGGGCTCCGCGACTTCTTCGGCTTCGGCGCGCCGCAACAGCAGCA GCCGGCCCCGGCCAGGCCGCCGACGGCGCGTAATCCGAACGCCCCGCCGCGTCCACCGGCTGCGGTCGGCCGTTCGGCCG CGGTGCTCGACGGAGCTCCGCGCTGA
Upstream 100 bases:
>100_bases CGCGATGCGCCGGCGCGCGGTAACCTTCCACGGCAAATACCGCGACCCGTCAACACCAACAGGTGAATGCCCGTTTGCGG CCTGATTCCGGTCCTATTAT
Downstream 100 bases:
>100_bases CATGACGCAGCCGCTCGCAACGCGCGAGCGAGACAACGAAACGGCCCGCATTCGCTCTCGAATGCGGGCCATTTGTTTGG TCCAAATCGCTGGCTGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MGCHDLPRDGCGRVRMSKLKSILKLLNEPGPAVVLAVVVAMLVGITGPASAQFFNFNPFASPRPAPRGGGGGGGWFGGDF FSPYQPQQPKKVIQDYSKAPAPEKRDNAAAPERYVLVLGDGMADWLAYGLEDAYSEQPDMGVTRKIKTNSGLIKYQPKGE PADWTAAAKSILATERADAIVIMLGLNDRLSIREPAVEKTDKPDDKKAAADKAKKEAKAKPGDTKPGDAKGADGKPGDAK SGDAKSDAKSDAKSDAKADPKSDTAAKPADSELPQDEADNDTPVIAAPEKTPRAPGALYEFRDERWVELYTKKIEELIAV AKSKGVPVLWVGLPAVRGPKGTADMLFLDSLYRDAAGKAGITYVDVWDGFVDEAGRFLQKGPDFEGQIRQLRSYDGVYFT KPGARKLAHYAEREINRLLAARSTPLELPTEPATPDANAVPGQPAPRPVAGPILPLVASSVGTDQLLGGPGSRPAAVDAL ASRTLVKGEALSPPAGRADDFIWPRREVGREQAKEPPKELNKPDTPVAATSPTETQQTAPGQLPPQQRPKRLTTPGAPGQ TQQPNQNGQAGQGLRDFFGFGAPQQQQPAPARPPTARNPNAPPRPPAAVGRSAAVLDGAPR
Sequences:
>Translated_621_residues MGCHDLPRDGCGRVRMSKLKSILKLLNEPGPAVVLAVVVAMLVGITGPASAQFFNFNPFASPRPAPRGGGGGGGWFGGDF FSPYQPQQPKKVIQDYSKAPAPEKRDNAAAPERYVLVLGDGMADWLAYGLEDAYSEQPDMGVTRKIKTNSGLIKYQPKGE PADWTAAAKSILATERADAIVIMLGLNDRLSIREPAVEKTDKPDDKKAAADKAKKEAKAKPGDTKPGDAKGADGKPGDAK SGDAKSDAKSDAKSDAKADPKSDTAAKPADSELPQDEADNDTPVIAAPEKTPRAPGALYEFRDERWVELYTKKIEELIAV AKSKGVPVLWVGLPAVRGPKGTADMLFLDSLYRDAAGKAGITYVDVWDGFVDEAGRFLQKGPDFEGQIRQLRSYDGVYFT KPGARKLAHYAEREINRLLAARSTPLELPTEPATPDANAVPGQPAPRPVAGPILPLVASSVGTDQLLGGPGSRPAAVDAL ASRTLVKGEALSPPAGRADDFIWPRREVGREQAKEPPKELNKPDTPVAATSPTETQQTAPGQLPPQQRPKRLTTPGAPGQ TQQPNQNGQAGQGLRDFFGFGAPQQQQPAPARPPTARNPNAPPRPPAAVGRSAAVLDGAPR >Mature_620_residues GCHDLPRDGCGRVRMSKLKSILKLLNEPGPAVVLAVVVAMLVGITGPASAQFFNFNPFASPRPAPRGGGGGGGWFGGDFF SPYQPQQPKKVIQDYSKAPAPEKRDNAAAPERYVLVLGDGMADWLAYGLEDAYSEQPDMGVTRKIKTNSGLIKYQPKGEP ADWTAAAKSILATERADAIVIMLGLNDRLSIREPAVEKTDKPDDKKAAADKAKKEAKAKPGDTKPGDAKGADGKPGDAKS GDAKSDAKSDAKSDAKADPKSDTAAKPADSELPQDEADNDTPVIAAPEKTPRAPGALYEFRDERWVELYTKKIEELIAVA KSKGVPVLWVGLPAVRGPKGTADMLFLDSLYRDAAGKAGITYVDVWDGFVDEAGRFLQKGPDFEGQIRQLRSYDGVYFTK PGARKLAHYAEREINRLLAARSTPLELPTEPATPDANAVPGQPAPRPVAGPILPLVASSVGTDQLLGGPGSRPAAVDALA SRTLVKGEALSPPAGRADDFIWPRREVGREQAKEPPKELNKPDTPVAATSPTETQQTAPGQLPPQQRPKRLTTPGAPGQT QQPNQNGQAGQGLRDFFGFGAPQQQQPAPARPPTARNPNAPPRPPAAVGRSAAVLDGAPR
Specific function: Unknown
COG id: COG2845
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65826; Mature: 65695
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGCHDLPRDGCGRVRMSKLKSILKLLNEPGPAVVLAVVVAMLVGITGPASAQFFNFNPFA CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCC SPRPAPRGGGGGGGWFGGDFFSPYQPQQPKKVIQDYSKAPAPEKRDNAAAPERYVLVLGD CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEC GMADWLAYGLEDAYSEQPDMGVTRKIKTNSGLIKYQPKGEPADWTAAAKSILATERADAI CHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEE VIMLGLNDRLSIREPAVEKTDKPDDKKAAADKAKKEAKAKPGDTKPGDAKGADGKPGDAK EEEECCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SGDAKSDAKSDAKSDAKADPKSDTAAKPADSELPQDEADNDTPVIAAPEKTPRAPGALYE CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHH FRDERWVELYTKKIEELIAVAKSKGVPVLWVGLPAVRGPKGTADMLFLDSLYRDAAGKAG HCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC ITYVDVWDGFVDEAGRFLQKGPDFEGQIRQLRSYDGVYFTKPGARKLAHYAEREINRLLA CEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH ARSTPLELPTEPATPDANAVPGQPAPRPVAGPILPLVASSVGTDQLLGGPGSRPAAVDAL HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCHHHHHH ASRTLVKGEALSPPAGRADDFIWPRREVGREQAKEPPKELNKPDTPVAATSPTETQQTAP HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCHHCCCC GQLPPQQRPKRLTTPGAPGQTQQPNQNGQAGQGLRDFFGFGAPQQQQPAPARPPTARNPN CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC APPRPPAAVGRSAAVLDGAPR CCCCCHHHHCCCHHHCCCCCC >Mature Secondary Structure GCHDLPRDGCGRVRMSKLKSILKLLNEPGPAVVLAVVVAMLVGITGPASAQFFNFNPFA CCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCC SPRPAPRGGGGGGGWFGGDFFSPYQPQQPKKVIQDYSKAPAPEKRDNAAAPERYVLVLGD CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEC GMADWLAYGLEDAYSEQPDMGVTRKIKTNSGLIKYQPKGEPADWTAAAKSILATERADAI CHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHCCCCEE VIMLGLNDRLSIREPAVEKTDKPDDKKAAADKAKKEAKAKPGDTKPGDAKGADGKPGDAK EEEECCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC SGDAKSDAKSDAKSDAKADPKSDTAAKPADSELPQDEADNDTPVIAAPEKTPRAPGALYE CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHH FRDERWVELYTKKIEELIAVAKSKGVPVLWVGLPAVRGPKGTADMLFLDSLYRDAAGKAG HCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC ITYVDVWDGFVDEAGRFLQKGPDFEGQIRQLRSYDGVYFTKPGARKLAHYAEREINRLLA CEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHH ARSTPLELPTEPATPDANAVPGQPAPRPVAGPILPLVASSVGTDQLLGGPGSRPAAVDAL HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCHHHHHH ASRTLVKGEALSPPAGRADDFIWPRREVGREQAKEPPKELNKPDTPVAATSPTETQQTAP HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCHHCCCC GQLPPQQRPKRLTTPGAPGQTQQPNQNGQAGQGLRDFFGFGAPQQQQPAPARPPTARNPN CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC APPRPPAAVGRSAAVLDGAPR CCCCCHHHHCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA