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The map label for this gene is ureF

Identifier: 146338147

GI number: 146338147

Start: 1110899

End: 1111621

Strand: Direct

Name: ureF

Synonym: BRADO1044

Alternate gene names: 146338147

Gene position: 1110899-1111621 (Clockwise)

Preceding gene: 146338146

Following gene: 146338148

Centisome position: 14.9

GC content: 68.6

Gene sequence:

>723_bases
ATGACCACAAATGATGCGGGACGTATCCCGTCCGCTGCCGGCGGTGCGGAGCTGGCCGCGCTGTACCGGCTGCTGACCTG
GCTGTCGCCGGCGTTCCCGATCGGCGGCTTCTCCTATTCCAGCGGACTGGAATGGGCCGTCGAAGCCGGCGATATCTGCG
ACGCGGCGGCTCTGCGCGGCTGGCTCGCGACGATGCTCACCGATGGCTCGGGCTTCTGTGACGCCGCCTTTCTCGTGCAC
GCGCACCGGGCGACCGAACTGGACGACATCAAGCGCCTGAGCGAGGTCGCCGAGCTCGCCGCGGCCTTCGTGCCGTCGCG
CGAGCGGCAGCTCGAAACCGCCGCCCAGGGACGCGCCTTCATCGAGATCGCGCGGTCCGCCTGGAGTTGCGCCGGCCTCG
ACGAGGCGGTGGCGCAATGCGACGTCGTCGTCTACCCGGTGGCCGTGGGGATGGTCGGCGCGCTTCACGGCGTGCCTCTG
GAACCGCTGCTGCATGGCTTTCTGCACGCCCTGGTGTCGAACTGGATTTCCGCGGGCAGCCGGCTCGTTCCATTGGGGCA
GACCGACAGCCAGCGCGTGCTCGCCGCGCTCGAGCCGGTCGTCGTTGCGACCGCGGACAGATCTCTCCACGCCTCGCTCG
ACGACATTGGCAGTGCGACGTTCCGGGCCGACCTCGCCAGCCTTCGTCACGAGACCCAATACACGAGACTGTTTCGGTCT
TGA

Upstream 100 bases:

>100_bases
AGCCACGCGCATCATGATCATGACCACGGCCATGCGCACGACGATCACGTGCATGACGAGCATTGCGGCCACGACCACCA
TCACGGTCATTCCCATGCTC

Downstream 100 bases:

>100_bases
CGAAGCAAATCCCGCTCGGCGCAACGGTCGGCGCCGGGCCGTTTCTTGCATCCCGATAATCCGTTAGGACAGCATCGCGC
GTGCTGCGACAGAAATGATG

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTTNDAGRIPSAAGGAELAALYRLLTWLSPAFPIGGFSYSSGLEWAVEAGDICDAAALRGWLATMLTDGSGFCDAAFLVH
AHRATELDDIKRLSEVAELAAAFVPSRERQLETAAQGRAFIEIARSAWSCAGLDEAVAQCDVVVYPVAVGMVGALHGVPL
EPLLHGFLHALVSNWISAGSRLVPLGQTDSQRVLAALEPVVVATADRSLHASLDDIGSATFRADLASLRHETQYTRLFRS

Sequences:

>Translated_240_residues
MTTNDAGRIPSAAGGAELAALYRLLTWLSPAFPIGGFSYSSGLEWAVEAGDICDAAALRGWLATMLTDGSGFCDAAFLVH
AHRATELDDIKRLSEVAELAAAFVPSRERQLETAAQGRAFIEIARSAWSCAGLDEAVAQCDVVVYPVAVGMVGALHGVPL
EPLLHGFLHALVSNWISAGSRLVPLGQTDSQRVLAALEPVVVATADRSLHASLDDIGSATFRADLASLRHETQYTRLFRS
>Mature_239_residues
TTNDAGRIPSAAGGAELAALYRLLTWLSPAFPIGGFSYSSGLEWAVEAGDICDAAALRGWLATMLTDGSGFCDAAFLVHA
HRATELDDIKRLSEVAELAAAFVPSRERQLETAAQGRAFIEIARSAWSCAGLDEAVAQCDVVVYPVAVGMVGALHGVPLE
PLLHGFLHALVSNWISAGSRLVPLGQTDSQRVLAALEPVVVATADRSLHASLDDIGSATFRADLASLRHETQYTRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): UREF_BRASO (A4YM32)

Other databases:

- EMBL:   CU234118
- RefSeq:   YP_001203195.1
- STRING:   A4YM32
- GeneID:   5114822
- GenomeReviews:   CU234118_GR
- KEGG:   bra:BRADO1044
- eggNOG:   COG0830
- HOGENOM:   HBG709295
- OMA:   WLSPAFP
- ProtClustDB:   CLSK818588
- BioCyc:   BSP376:BRADO1044-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01385
- InterPro:   IPR002639
- PIRSF:   PIRSF009467

Pfam domain/function: PF01730 UreF

EC number: NA

Molecular weight: Translated: 25431; Mature: 25300

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNDAGRIPSAAGGAELAALYRLLTWLSPAFPIGGFSYSSGLEWAVEAGDICDAAALRG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHH
WLATMLTDGSGFCDAAFLVHAHRATELDDIKRLSEVAELAAAFVPSRERQLETAAQGRAF
HHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IEIARSAWSCAGLDEAVAQCDVVVYPVAVGMVGALHGVPLEPLLHGFLHALVSNWISAGS
HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
RLVPLGQTDSQRVLAALEPVVVATADRSLHASLDDIGSATFRADLASLRHETQYTRLFRS
EEEECCCCCHHHHHHHHCCHHEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTNDAGRIPSAAGGAELAALYRLLTWLSPAFPIGGFSYSSGLEWAVEAGDICDAAALRG
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHH
WLATMLTDGSGFCDAAFLVHAHRATELDDIKRLSEVAELAAAFVPSRERQLETAAQGRAF
HHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IEIARSAWSCAGLDEAVAQCDVVVYPVAVGMVGALHGVPLEPLLHGFLHALVSNWISAGS
HHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
RLVPLGQTDSQRVLAALEPVVVATADRSLHASLDDIGSATFRADLASLRHETQYTRLFRS
EEEECCCCCHHHHHHHHCCHHEEECCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA