Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is ureB [H]

Identifier: 146338141

GI number: 146338141

Start: 1106773

End: 1107078

Strand: Direct

Name: ureB [H]

Synonym: BRADO1038

Alternate gene names: 146338141

Gene position: 1106773-1107078 (Clockwise)

Preceding gene: 146338140

Following gene: 146338142

Centisome position: 14.84

GC content: 66.34

Gene sequence:

>306_bases
ATGATCCCCGGCGAACTCTTCATCCAGGACGGCGAGATCGAGCTCAATGCCGGCCGCAAGACGGTGACCATTTCGGTCGC
CAACACCGGCGACCGGCCGATCCAGGTCGGCTCGCACTACCATTTCTTCGAGACGAACCCGGCGCTGAAGTTCGATCGCA
AGAAGGCCAGGGGCATGCGGCTCGACATCGCCGCCGGCACCGCGGTGCGCTTCGAGCCGGGCCAGACCCGCGACGTGCAG
CTGGTGGCGCTCGCCGGCAAGCGCATGGTCTATGGCTTCCGCGGCGACGTCATGGGCAAGCTGTAG

Upstream 100 bases:

>100_bases
GGGCTTGACCCGGGCATCCACGCTCTTCGATCTCAATGGAAAGACGTGGGTGGCCGGGTCAAGCCCGGCCATGACGCAGT
GGAAACCTGCGAGGTAACAG

Downstream 100 bases:

>100_bases
ACCGATGTTGACCGGGTTGCGCCTCGTCTCCGAAGCGGCCGAGCTGGCGGCACGCCGCCACGCCGGCCAGCAGCGCAAGG
GCCGCGACGAGGAGCCCTAT

Product: urease subunit beta

Products: NA

Alternate protein names: Urea amidohydrolase subunit beta [H]

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MIPGELFIQDGEIELNAGRKTVTISVANTGDRPIQVGSHYHFFETNPALKFDRKKARGMRLDIAAGTAVRFEPGQTRDVQ
LVALAGKRMVYGFRGDVMGKL

Sequences:

>Translated_101_residues
MIPGELFIQDGEIELNAGRKTVTISVANTGDRPIQVGSHYHFFETNPALKFDRKKARGMRLDIAAGTAVRFEPGQTRDVQ
LVALAGKRMVYGFRGDVMGKL
>Mature_101_residues
MIPGELFIQDGEIELNAGRKTVTISVANTGDRPIQVGSHYHFFETNPALKFDRKKARGMRLDIAAGTAVRFEPGQTRDVQ
LVALAGKRMVYGFRGDVMGKL

Specific function: Unknown

COG id: COG0832

COG function: function code E; Urea amidohydrolase (urease) beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the urease beta subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002019 [H]

Pfam domain/function: PF00699 Urease_beta [H]

EC number: =3.5.1.5 [H]

Molecular weight: Translated: 11150; Mature: 11150

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPGELFIQDGEIELNAGRKTVTISVANTGDRPIQVGSHYHFFETNPALKFDRKKARGMR
CCCCEEEEECCEEEECCCCEEEEEEEECCCCCCEEECCEEEEEECCCCEEECCCCCCCEE
LDIAAGTAVRFEPGQTRDVQLVALAGKRMVYGFRGDVMGKL
EEEECCCEEEECCCCCCCEEEEEECCCEEEEEECCEEECCC
>Mature Secondary Structure
MIPGELFIQDGEIELNAGRKTVTISVANTGDRPIQVGSHYHFFETNPALKFDRKKARGMR
CCCCEEEEECCEEEECCCCEEEEEEEECCCCCCEEECCEEEEEECCCCEEECCCCCCCEE
LDIAAGTAVRFEPGQTRDVQLVALAGKRMVYGFRGDVMGKL
EEEECCCEEEECCCCCCCEEEEEECCCEEEEEECCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]