| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337947
Identifier: 146337947
GI number: 146337947
Start: 887534
End: 888928
Strand: Reverse
Name: 146337947
Synonym: BRADO0837
Alternate gene names: NA
Gene position: 888928-887534 (Counterclockwise)
Preceding gene: 146337948
Following gene: 146337946
Centisome position: 11.92
GC content: 71.76
Gene sequence:
>1395_bases ATGGCGAGCGCGATCGATCCGCAGAGCCATGCGAGGCTGCGCCAGAGCTTCCTGCTCGGCCTCACGCGCCAGCCACTCGG GCCGCCGCCGGCGCTCGCCGAGCAGCTGCCGCGGGATCGCGAGCCGGCGTTGCCGCTGCTCGCGCTGTCAGCGCAATGGC AGCGCTTTGCCGGGATGCCGGCGCCGGTCATCGATCCCATTCCGGACGCCGCGCTGCGGCTGCACCAGGATGCGCGACCG ATCCTGCCCGACGCCGCGCGCCGCGCGCTGAAGGCTCTGGCGCGCAGCGTCGAGAAATCGCTGGCGTCGAACGTCCTGCC GCTGGCGCTGCGACGTATTCACGCCGCTGGCTACCGGTTGCATCCATTCGATCTGCCGGATTGTGCATCCCACATCAAGG CGGAGGCCGGCGATCTCGGGCTCGCCGAGCGCGCCTTCCTCGCACTGATCGCGCCGGACTCCGATGAGGAAGCAGCCAAA GGCCTTTTCTTCGAGCGGATCACCGCCGAGAACTGGACGACCTTCCCCAAGGCGCAGCGCCGCGGCTTCGTCGCGAAGCT GCGCCGCGACGATCCCGCCGGGGGCCGCGCGCTGATCGAATCCGTCTGGAAGGCCGAGCCCGCGCCGGTTCGCGCGGCGC TGCTCGATGCACTCGCGGTCGGCCTCGGCGAGGACGACAAGCCGTTCCTGGAGAGCCTCGGCACAGACCGCGCCGACAGC GTCAAGCAGCTCGCCGCGCAGCTGCTGGCGCGGATCGCCGAACGCGGCGAGCACGGGGCCCGTGTTGCGGAAGCCGCGCG ATGCTTCACGCGCGCCGGCTCGTTCCTGGCCAAGATCGGGCTCGGCTCGGCCTCGACCCTGACCTTCAAGCTGCCGAGCG ACGGGCTGAATTGGCAGCAGACGGACGCGCTGCGCGAGCGGCTGTTCGGCGGCCTGCAGCTGTCGGCGCTCGCTGACGCC GCCGGCGTGACGGCGGAGGCCCTGATCGCGGCGCTGCCGCCGGGCGAGCATCGCGTGCTCATGCTGCTGATGGACGCCGC CGCAGCCGAGGGCGACGACGACGCGGTGACCCGCATCATCGGCGCGCGTCTCGGCGCCGGCGAGTCGCTCAACGGCTACA TCTTGATGTCGATCGCGGCGAAGGCCCGCCAGCCGCTCGCGCCATCCATCGCCGAACGCGTGCTCGCCTCCTCTGCCTGG CAGAAGACGGTGCAGGAGCTCGCCGATGCGACGACGCCGGCGGCGCAGAAGGATGACGGCCGGCTGGCGCTGATGGCCGC GCTGATGCCGCGGGCCGCGATGTCAGCGTTCACCGCCTCGCTCGCCGCGCTGCCGCTGTCGACCACGCGGGCGGCGAAGG ATTTCACCGATCTCGTTCTCGCGCTGCCAGCGTGA
Upstream 100 bases:
>100_bases GGCTCGACAATTTGTCGCTGCTCTGTCTGTGGGACGGCCGGACCGCACAGGTGCTCGCCGCCGACACGCCGCTCGGCCGC TGGCACCACGAGGACTGACG
Downstream 100 bases:
>100_bases GCGCGCCACATGATGCCGGGAGTATGCCCATGACCACCGCCGATGCGAGCCCGAACGAGGCCCAGCTGCGCCGCTCCGCC GAGGCGCTCCATGCCCATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 464; Mature: 463
Protein sequence:
>464_residues MASAIDPQSHARLRQSFLLGLTRQPLGPPPALAEQLPRDREPALPLLALSAQWQRFAGMPAPVIDPIPDAALRLHQDARP ILPDAARRALKALARSVEKSLASNVLPLALRRIHAAGYRLHPFDLPDCASHIKAEAGDLGLAERAFLALIAPDSDEEAAK GLFFERITAENWTTFPKAQRRGFVAKLRRDDPAGGRALIESVWKAEPAPVRAALLDALAVGLGEDDKPFLESLGTDRADS VKQLAAQLLARIAERGEHGARVAEAARCFTRAGSFLAKIGLGSASTLTFKLPSDGLNWQQTDALRERLFGGLQLSALADA AGVTAEALIAALPPGEHRVLMLLMDAAAAEGDDDAVTRIIGARLGAGESLNGYILMSIAAKARQPLAPSIAERVLASSAW QKTVQELADATTPAAQKDDGRLALMAALMPRAAMSAFTASLAALPLSTTRAAKDFTDLVLALPA
Sequences:
>Translated_464_residues MASAIDPQSHARLRQSFLLGLTRQPLGPPPALAEQLPRDREPALPLLALSAQWQRFAGMPAPVIDPIPDAALRLHQDARP ILPDAARRALKALARSVEKSLASNVLPLALRRIHAAGYRLHPFDLPDCASHIKAEAGDLGLAERAFLALIAPDSDEEAAK GLFFERITAENWTTFPKAQRRGFVAKLRRDDPAGGRALIESVWKAEPAPVRAALLDALAVGLGEDDKPFLESLGTDRADS VKQLAAQLLARIAERGEHGARVAEAARCFTRAGSFLAKIGLGSASTLTFKLPSDGLNWQQTDALRERLFGGLQLSALADA AGVTAEALIAALPPGEHRVLMLLMDAAAAEGDDDAVTRIIGARLGAGESLNGYILMSIAAKARQPLAPSIAERVLASSAW QKTVQELADATTPAAQKDDGRLALMAALMPRAAMSAFTASLAALPLSTTRAAKDFTDLVLALPA >Mature_463_residues ASAIDPQSHARLRQSFLLGLTRQPLGPPPALAEQLPRDREPALPLLALSAQWQRFAGMPAPVIDPIPDAALRLHQDARPI LPDAARRALKALARSVEKSLASNVLPLALRRIHAAGYRLHPFDLPDCASHIKAEAGDLGLAERAFLALIAPDSDEEAAKG LFFERITAENWTTFPKAQRRGFVAKLRRDDPAGGRALIESVWKAEPAPVRAALLDALAVGLGEDDKPFLESLGTDRADSV KQLAAQLLARIAERGEHGARVAEAARCFTRAGSFLAKIGLGSASTLTFKLPSDGLNWQQTDALRERLFGGLQLSALADAA GVTAEALIAALPPGEHRVLMLLMDAAAAEGDDDAVTRIIGARLGAGESLNGYILMSIAAKARQPLAPSIAERVLASSAWQ KTVQELADATTPAAQKDDGRLALMAALMPRAAMSAFTASLAALPLSTTRAAKDFTDLVLALPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49160; Mature: 49029
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASAIDPQSHARLRQSFLLGLTRQPLGPPPALAEQLPRDREPALPLLALSAQWQRFAGMP CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC APVIDPIPDAALRLHQDARPILPDAARRALKALARSVEKSLASNVLPLALRRIHAAGYRL CCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE HPFDLPDCASHIKAEAGDLGLAERAFLALIAPDSDEEAAKGLFFERITAENWTTFPKAQR CCCCCHHHHHHHHCCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHH RGFVAKLRRDDPAGGRALIESVWKAEPAPVRAALLDALAVGLGEDDKPFLESLGTDRADS CCHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHH VKQLAAQLLARIAERGEHGARVAEAARCFTRAGSFLAKIGLGSASTLTFKLPSDGLNWQQ HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHH TDALRERLFGGLQLSALADAAGVTAEALIAALPPGEHRVLMLLMDAAAAEGDDDAVTRII HHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHCCCCCCEEEHEEEHHHCCCCCHHHHHHHH GARLGAGESLNGYILMSIAAKARQPLAPSIAERVLASSAWQKTVQELADATTPAAQKDDG HHHCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RLALMAALMPRAAMSAFTASLAALPLSTTRAAKDFTDLVLALPA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASAIDPQSHARLRQSFLLGLTRQPLGPPPALAEQLPRDREPALPLLALSAQWQRFAGMP CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCC APVIDPIPDAALRLHQDARPILPDAARRALKALARSVEKSLASNVLPLALRRIHAAGYRL CCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE HPFDLPDCASHIKAEAGDLGLAERAFLALIAPDSDEEAAKGLFFERITAENWTTFPKAQR CCCCCHHHHHHHHCCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHH RGFVAKLRRDDPAGGRALIESVWKAEPAPVRAALLDALAVGLGEDDKPFLESLGTDRADS CCHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHH VKQLAAQLLARIAERGEHGARVAEAARCFTRAGSFLAKIGLGSASTLTFKLPSDGLNWQQ HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHH TDALRERLFGGLQLSALADAAGVTAEALIAALPPGEHRVLMLLMDAAAAEGDDDAVTRII HHHHHHHHHCCCHHHHHHHHHCHHHHHHHHHCCCCCCEEEHEEEHHHCCCCCHHHHHHHH GARLGAGESLNGYILMSIAAKARQPLAPSIAERVLASSAWQKTVQELADATTPAAQKDDG HHHCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RLALMAALMPRAAMSAFTASLAALPLSTTRAAKDFTDLVLALPA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA