| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yehM [H]
Identifier: 146337945
GI number: 146337945
Start: 885023
End: 886399
Strand: Reverse
Name: yehM [H]
Synonym: BRADO0835
Alternate gene names: 146337945
Gene position: 886399-885023 (Counterclockwise)
Preceding gene: 146337946
Following gene: 146337944
Centisome position: 11.89
GC content: 68.92
Gene sequence:
>1377_bases ATGGCCGCGGCATCGCCCGATCGACTGCATCTCCTGGGGATCCGGCATCACGGGCCGGGCTCGGCGCGCGCCGTGCTCAC GGCATTGGATGCGGCCGATCCCGCGATCGTGCTGATCGAGGGTCCGCCCGATGCCGACGAACTGATCAGCTTCGCAGCGA AGCCCGCGATGGTGCCGCCGATCGCGCTGCTGGTGCATGCGCAGGACGATGCCGCCAATGCAAGCTTCTTTCCGTTTGCG GTGTTCTCGCCGGAATGGCAGGCGATCCGCTGGGCGCTGGCGAAGCAGCGACCGGTGCGCTTCATCGATCTGCCGGCATC GCATCGCCTCGCCGAACGGGCCAAGGCGGCGAAGGAGGATGAGGAGACCGAGGCTTCTTCCGAGGACGCCGGCGCGGCGG CGCCTAATCAGCCCAAGACGATCGATCCGGAGCTCGCACGGATCCGGCGCGATCCCCTGGCCTATCTCTCCACACTGGCC GGCTATGAGGACAGCGAGGCTTGGTGGAATGCGCTCGTCGAGCAGGGCGCGCATGGTCCGGAGATCTTCGCCGCGCTGGA GGCCGCGATCGCTGCCCTGCGCGAGACCATCGATCCGCTGCCCTATCAACCCGCCGACGAAGCTCAGCGCGAGCTGCGCC GGGAAGCGCATATGCGCCTGGAGATCGCGGCCGCACTGAGCGCGCAGGACGACCCTGTCGCCGTCGTTTGCGGCGCCTGG CATGTGCCCGCGCTGCGCAGGAAGGTGGCGCTCAAGGATGATCGGGCGCTGCTGAAGGGATTGCCACAGATCAAGGTCAC CGCCACCTGGGTGCCGTGGACCGAGACACGGCTCGCCGCGTCCTCCGGTTATGGCGCCGGCGTGATCTCGCCCGGCTGGT ACGCGCATCTCTGGAAAGGACTGCAACACGAACACGACCGGGCTGCCGCTCTCGACTCTACCGCTTTTACGACGCGCTGG CAGGCGCGGGTGGCCGAGCTGTTGCGGCGGAACGGCCGGCCGGCCTCGACGGCGTCCGTCATCGAGGCGTCGCGGCTGGC AATCACGCTGGCGGCGCTGCGCGACGTGGCGCTGCCGGGCTTGGCCGAGATGCGCGAGGCGAGCCTCGCCACCCTGTGCG AGGGCGAGACGGCGCTGTTTCGCCTGATCGAGCAGCAGCTCATCATCGGCCAGCGTGTCGGCGAGATCGACGACAGCGTG CCGCAAATGCCGCTCGCCGCGGATCTCGCGCGCTGGCAGCGCAAGCTGAAGCTCAAGCCCGAGGCGCTCGACAGCGACAT CGCGCTCGACCTGCGCAGCGACGCGGGCCTTGCGAAGTCGCAGCTGCTGCATCGCCTCGCGCTTATCCAGGTGCCGTGGG GACGGATGCAGGGATAG
Upstream 100 bases:
>100_bases GTGCAGGACAGAGTGGTGCTGCAGGAATATCTCGAGACGGTCGTGCGCGAGCGCAAGCCGTGGGCCGATCTCTACGGCGC CATCCGCGACGTGATGTGAC
Downstream 100 bases:
>100_bases GGACAGAGCCGCGGCACGTTTCGCGAGAACTGGCGGCTGCGCTGGGAGCCGGAGTTTTCTGTCCGCCTCGTCGAGGCGCT GGTGCATGGCACGACGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MAAASPDRLHLLGIRHHGPGSARAVLTALDAADPAIVLIEGPPDADELISFAAKPAMVPPIALLVHAQDDAANASFFPFA VFSPEWQAIRWALAKQRPVRFIDLPASHRLAERAKAAKEDEETEASSEDAGAAAPNQPKTIDPELARIRRDPLAYLSTLA GYEDSEAWWNALVEQGAHGPEIFAALEAAIAALRETIDPLPYQPADEAQRELRREAHMRLEIAAALSAQDDPVAVVCGAW HVPALRRKVALKDDRALLKGLPQIKVTATWVPWTETRLAASSGYGAGVISPGWYAHLWKGLQHEHDRAAALDSTAFTTRW QARVAELLRRNGRPASTASVIEASRLAITLAALRDVALPGLAEMREASLATLCEGETALFRLIEQQLIIGQRVGEIDDSV PQMPLAADLARWQRKLKLKPEALDSDIALDLRSDAGLAKSQLLHRLALIQVPWGRMQG
Sequences:
>Translated_458_residues MAAASPDRLHLLGIRHHGPGSARAVLTALDAADPAIVLIEGPPDADELISFAAKPAMVPPIALLVHAQDDAANASFFPFA VFSPEWQAIRWALAKQRPVRFIDLPASHRLAERAKAAKEDEETEASSEDAGAAAPNQPKTIDPELARIRRDPLAYLSTLA GYEDSEAWWNALVEQGAHGPEIFAALEAAIAALRETIDPLPYQPADEAQRELRREAHMRLEIAAALSAQDDPVAVVCGAW HVPALRRKVALKDDRALLKGLPQIKVTATWVPWTETRLAASSGYGAGVISPGWYAHLWKGLQHEHDRAAALDSTAFTTRW QARVAELLRRNGRPASTASVIEASRLAITLAALRDVALPGLAEMREASLATLCEGETALFRLIEQQLIIGQRVGEIDDSV PQMPLAADLARWQRKLKLKPEALDSDIALDLRSDAGLAKSQLLHRLALIQVPWGRMQG >Mature_457_residues AAASPDRLHLLGIRHHGPGSARAVLTALDAADPAIVLIEGPPDADELISFAAKPAMVPPIALLVHAQDDAANASFFPFAV FSPEWQAIRWALAKQRPVRFIDLPASHRLAERAKAAKEDEETEASSEDAGAAAPNQPKTIDPELARIRRDPLAYLSTLAG YEDSEAWWNALVEQGAHGPEIFAALEAAIAALRETIDPLPYQPADEAQRELRREAHMRLEIAAALSAQDDPVAVVCGAWH VPALRRKVALKDDRALLKGLPQIKVTATWVPWTETRLAASSGYGAGVISPGWYAHLWKGLQHEHDRAAALDSTAFTTRWQ ARVAELLRRNGRPASTASVIEASRLAITLAALRDVALPGLAEMREASLATLCEGETALFRLIEQQLIIGQRVGEIDDSVP QMPLAADLARWQRKLKLKPEALDSDIALDLRSDAGLAKSQLLHRLALIQVPWGRMQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788439, Length=470, Percent_Identity=29.5744680851064, Blast_Score=127, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49758; Mature: 49627
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAASPDRLHLLGIRHHGPGSARAVLTALDAADPAIVLIEGPPDADELISFAAKPAMVPP CCCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCC IALLVHAQDDAANASFFPFAVFSPEWQAIRWALAKQRPVRFIDLPASHRLAERAKAAKED EEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCH EETEASSEDAGAAAPNQPKTIDPELARIRRDPLAYLSTLAGYEDSEAWWNALVEQGAHGP HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCH EIFAALEAAIAALRETIDPLPYQPADEAQRELRREAHMRLEIAAALSAQDDPVAVVCGAW HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC HVPALRRKVALKDDRALLKGLPQIKVTATWVPWTETRLAASSGYGAGVISPGWYAHLWKG CCHHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHH LQHEHDRAAALDSTAFTTRWQARVAELLRRNGRPASTASVIEASRLAITLAALRDVALPG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC LAEMREASLATLCEGETALFRLIEQQLIIGQRVGEIDDSVPQMPLAADLARWQRKLKLKP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC EALDSDIALDLRSDAGLAKSQLLHRLALIQVPWGRMQG HHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHCCC >Mature Secondary Structure AAASPDRLHLLGIRHHGPGSARAVLTALDAADPAIVLIEGPPDADELISFAAKPAMVPP CCCCCCCEEEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCCCC IALLVHAQDDAANASFFPFAVFSPEWQAIRWALAKQRPVRFIDLPASHRLAERAKAAKED EEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCH EETEASSEDAGAAAPNQPKTIDPELARIRRDPLAYLSTLAGYEDSEAWWNALVEQGAHGP HHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCH EIFAALEAAIAALRETIDPLPYQPADEAQRELRREAHMRLEIAAALSAQDDPVAVVCGAW HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC HVPALRRKVALKDDRALLKGLPQIKVTATWVPWTETRLAASSGYGAGVISPGWYAHLWKG CCHHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCCCHHHHHHHH LQHEHDRAAALDSTAFTTRWQARVAELLRRNGRPASTASVIEASRLAITLAALRDVALPG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC LAEMREASLATLCEGETALFRLIEQQLIIGQRVGEIDDSVPQMPLAADLARWQRKLKLKP HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC EALDSDIALDLRSDAGLAKSQLLHRLALIQVPWGRMQG HHCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]