| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337912
Identifier: 146337912
GI number: 146337912
Start: 844096
End: 845514
Strand: Direct
Name: 146337912
Synonym: BRADO0800
Alternate gene names: NA
Gene position: 844096-845514 (Clockwise)
Preceding gene: 146337911
Following gene: 146337914
Centisome position: 11.32
GC content: 62.23
Gene sequence:
>1419_bases ATGACGAGCGAGATATCACCTCACCTGTTCTTTCCCGAAGCCAGGCTCGCCTTTCACCCCGACCGTGCTTCGGACGTGCA TCTCCACCCTCTGCGCGGGCTGCTGCGGTTCGGGCCTTATTCGTCCGGTCTCGTTCCCGATCCCATCCGGATCGCAACGA TCGCTCCCGCGCGGCAGGGAAACCGGCTCTACGGCTTCATGAAGGAACTGGCGTCCCAGTACAGGCCGACCGAGCGCAAG GACTACCTGCCTCCCTGGCCCGGTTTCCGCAAAGTGTTCAATGTCGAGATGCGGGGGGCGGTCAAGGATTGCCATATCGA GCTGGACGACCGTCTAGAGGGCGAGATGAAGGACTCGGCCGCGCCCCATGTCCTGCTGGCGGAACGCTTGCTTCGCGCGA TCCAATCACTGGAAGCCCGCCGCGACGCGTTCGACATTGTCTTCATCTATATTCCACTAAGCTGGGCGGCCGGGTTCTCG GGAGCGGAAGGCGACGACTTCGATCTTCATGACCACTTGAAGGCCGCCACTGCGGCGCGACGCATTCCGATCCAGCTCGT GCGCGAAGACCGCGCGCTTGCCTATCCGGACCGTGCGAGCGTCATGTGGCGGATCGGCCTTGCAATCTACGCGAAGGCGG GCGGCGTTCCCTGGAAACTCGCAGATTCGGACCCGGAGGCCGCCTACATCGGCCTGTCCTACGCCCTGCGTCCGACCGAA TCAGACCGGCCGCGCTTTGTCACTTGCTGCAGCCAAGTGTTCGACGCGGAAGGAGCCGGTCTTGAGTTCGTTGCGTACGA CGCCCACGAAATCGATGTACAACGGGACAATCCATTCATGTCCCGGACGGAGATGTTCCGCGTAATGGGACGATCGCTGG ATCTGTACAGACGACGGCACTCAGGCCGCTCTCCTAGGAGAGTGACGGTACACAAGACGACGGAGTTCAAAAAGGACGAG ATCGACGGCTGCATGGAAGCGCTGCATCTGTGCGAAGCGGTCGACCTCGTGCAGGTGGTGGAGGACATCGGCTGGCGGGG AGTCCGCATCGATCGCGACCAGCAAAGCGGCAGAGGCAAGCCGACCGGCTATCCGGTCGACCGCGGCACCCTGATCCCAC TCGGCGACCGCGAGTGTCTGCTCTGGATGCACGGCGACGTGAAGGGTGTCGCGGATCGCTCGTATTATCAAGGCAGCCGA AGCACGCCTCGTCCGATCCGACTTGTCCGTCATGCAGGCCAAGGGCCGTGGGACGAAACCGCCCGCTCGGCTCTTGCGCT CGCGAAGATGGATTGGAATAACGACGCGCTATACGACATGCTGCCGGTGACGATGGCTTACGCCAAAACGCTCGCGCGCG TCGTCAAACGAATGGACGGACTAGGCTCCGCTCCCTACCAATTCCGCTTCTTCATGTAG
Upstream 100 bases:
>100_bases CGTCCTCGCAGCGCGACCTTCCGGCGCTCGGGATCAGCGCAGGCGTGGATGCGGTCTTCAAGCTGGGGAATGTCACCGCG TTCTCGGGGAGAGCCCGCCC
Downstream 100 bases:
>100_bases CCGTTGCGAAAGCTGGTCGGCTTTCAAAATATGTACCGGAAAAGTTACGAAGCCGACGATCATCGACCTCTGCCGACAGG AAGACGCAGCCTCGCTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Piwi Domain Protein; LOW QUALITY PROTEIN Piwi Domain-Containing Protein; Regulatory Protein
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MTSEISPHLFFPEARLAFHPDRASDVHLHPLRGLLRFGPYSSGLVPDPIRIATIAPARQGNRLYGFMKELASQYRPTERK DYLPPWPGFRKVFNVEMRGAVKDCHIELDDRLEGEMKDSAAPHVLLAERLLRAIQSLEARRDAFDIVFIYIPLSWAAGFS GAEGDDFDLHDHLKAATAARRIPIQLVREDRALAYPDRASVMWRIGLAIYAKAGGVPWKLADSDPEAAYIGLSYALRPTE SDRPRFVTCCSQVFDAEGAGLEFVAYDAHEIDVQRDNPFMSRTEMFRVMGRSLDLYRRRHSGRSPRRVTVHKTTEFKKDE IDGCMEALHLCEAVDLVQVVEDIGWRGVRIDRDQQSGRGKPTGYPVDRGTLIPLGDRECLLWMHGDVKGVADRSYYQGSR STPRPIRLVRHAGQGPWDETARSALALAKMDWNNDALYDMLPVTMAYAKTLARVVKRMDGLGSAPYQFRFFM
Sequences:
>Translated_472_residues MTSEISPHLFFPEARLAFHPDRASDVHLHPLRGLLRFGPYSSGLVPDPIRIATIAPARQGNRLYGFMKELASQYRPTERK DYLPPWPGFRKVFNVEMRGAVKDCHIELDDRLEGEMKDSAAPHVLLAERLLRAIQSLEARRDAFDIVFIYIPLSWAAGFS GAEGDDFDLHDHLKAATAARRIPIQLVREDRALAYPDRASVMWRIGLAIYAKAGGVPWKLADSDPEAAYIGLSYALRPTE SDRPRFVTCCSQVFDAEGAGLEFVAYDAHEIDVQRDNPFMSRTEMFRVMGRSLDLYRRRHSGRSPRRVTVHKTTEFKKDE IDGCMEALHLCEAVDLVQVVEDIGWRGVRIDRDQQSGRGKPTGYPVDRGTLIPLGDRECLLWMHGDVKGVADRSYYQGSR STPRPIRLVRHAGQGPWDETARSALALAKMDWNNDALYDMLPVTMAYAKTLARVVKRMDGLGSAPYQFRFFM >Mature_471_residues TSEISPHLFFPEARLAFHPDRASDVHLHPLRGLLRFGPYSSGLVPDPIRIATIAPARQGNRLYGFMKELASQYRPTERKD YLPPWPGFRKVFNVEMRGAVKDCHIELDDRLEGEMKDSAAPHVLLAERLLRAIQSLEARRDAFDIVFIYIPLSWAAGFSG AEGDDFDLHDHLKAATAARRIPIQLVREDRALAYPDRASVMWRIGLAIYAKAGGVPWKLADSDPEAAYIGLSYALRPTES DRPRFVTCCSQVFDAEGAGLEFVAYDAHEIDVQRDNPFMSRTEMFRVMGRSLDLYRRRHSGRSPRRVTVHKTTEFKKDEI DGCMEALHLCEAVDLVQVVEDIGWRGVRIDRDQQSGRGKPTGYPVDRGTLIPLGDRECLLWMHGDVKGVADRSYYQGSRS TPRPIRLVRHAGQGPWDETARSALALAKMDWNNDALYDMLPVTMAYAKTLARVVKRMDGLGSAPYQFRFFM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53481; Mature: 53350
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSEISPHLFFPEARLAFHPDRASDVHLHPLRGLLRFGPYSSGLVPDPIRIATIAPARQG CCCCCCCCEECCCCCEEECCCCCCCCEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCC NRLYGFMKELASQYRPTERKDYLPPWPGFRKVFNVEMRGAVKDCHIELDDRLEGEMKDSA CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEHHHHCCCEEEEEEECCCCCCCHHHCC APHVLLAERLLRAIQSLEARRDAFDIVFIYIPLSWAAGFSGAEGDDFDLHDHLKAATAAR CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHH RIPIQLVREDRALAYPDRASVMWRIGLAIYAKAGGVPWKLADSDPEAAYIGLSYALRPTE CCCHHEEECCCCCCCCCHHHHHEEEEEEEEEECCCCCEEECCCCCCEEEEEEEEEECCCC SDRPRFVTCCSQVFDAEGAGLEFVAYDAHEIDVQRDNPFMSRTEMFRVMGRSLDLYRRRH CCCCHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH SGRSPRRVTVHKTTEFKKDEIDGCMEALHLCEAVDLVQVVEDIGWRGVRIDRDQQSGRGK CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHCCCCC PTGYPVDRGTLIPLGDRECLLWMHGDVKGVADRSYYQGSRSTPRPIRLVRHAGQGPWDET CCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCHHHH ARSALALAKMDWNNDALYDMLPVTMAYAKTLARVVKRMDGLGSAPYQFRFFM HHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC >Mature Secondary Structure TSEISPHLFFPEARLAFHPDRASDVHLHPLRGLLRFGPYSSGLVPDPIRIATIAPARQG CCCCCCCEECCCCCEEECCCCCCCCEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCC NRLYGFMKELASQYRPTERKDYLPPWPGFRKVFNVEMRGAVKDCHIELDDRLEGEMKDSA CHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEHHHHCCCEEEEEEECCCCCCCHHHCC APHVLLAERLLRAIQSLEARRDAFDIVFIYIPLSWAAGFSGAEGDDFDLHDHLKAATAAR CCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEHHHCCCCCCCCCCCCHHHHHHHHHHHH RIPIQLVREDRALAYPDRASVMWRIGLAIYAKAGGVPWKLADSDPEAAYIGLSYALRPTE CCCHHEEECCCCCCCCCHHHHHEEEEEEEEEECCCCCEEECCCCCCEEEEEEEEEECCCC SDRPRFVTCCSQVFDAEGAGLEFVAYDAHEIDVQRDNPFMSRTEMFRVMGRSLDLYRRRH CCCCHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH SGRSPRRVTVHKTTEFKKDEIDGCMEALHLCEAVDLVQVVEDIGWRGVRIDRDQQSGRGK CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHCCCCC PTGYPVDRGTLIPLGDRECLLWMHGDVKGVADRSYYQGSRSTPRPIRLVRHAGQGPWDET CCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCHHHH ARSALALAKMDWNNDALYDMLPVTMAYAKTLARVVKRMDGLGSAPYQFRFFM HHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA