| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is atsA [H]
Identifier: 146337312
GI number: 146337312
Start: 155442
End: 156386
Strand: Direct
Name: atsA [H]
Synonym: BRADO0143
Alternate gene names: 146337312
Gene position: 155442-156386 (Clockwise)
Preceding gene: 146337311
Following gene: 146337314
Centisome position: 2.08
GC content: 61.69
Gene sequence:
>945_bases ATGATCAATCGCCGCACGATGCTGTCGCTTGCAATGGGAACGGCTGGAGCCATGGTCGCACCATCGGTGTTCGCGCAAGG CCCCAAGACGGGAACGCGCATCATCTTCCTGGGCACCAAGGGTGGCCCGCGTGTCGGCATCGGCGCGTCCAACCCGGCCA ATCTGGTCGTCGTCAACGGCACGCCGTTCGTGATCGATTGCGGCATGGGCGTCAGCCGTCAGCTGGTCAGCGCCGGCGTG CCGATCCCGTCGGTGAAGTACATCCTGATCAGCCACCATCATTCCGATCACAATCTGGAATACGGCAATCTGTTCTACAA CGCCTGGGCCGCGGGGCTGTCGACACCGATTCAGTCGTTCGGACCGAAAGGCCTGGAGGCGATGACGCGGAGCTTCTGGG AAACCAACAAGTTCGATGTCGACACGCGCATCGATGACGAGGGCCGGCCCGATCCTCGGCCAATGCTGATCGCCAAGGAT ATCGATGCCGACGGCGTGGTGGTGAAGACGGCGGACGTGACGGTGACTGCGTTCCGCACGCCTCATCCGCCGATCACCGA CAATTTCGCCTACAAGTTCGAGACACCGGACGGCACCATCGTGTTCTCGAGCGACACCGCCTATAATCCGAAGCTCGCCG ATTTCGCGAAGGGCGCCGACGTGCTCGTGCACGAATGTCTCTACGTGCCGGCGGTCGATCGTCTGGTGATCAAGACCAAG AACGGCTCGACCTTGAAGAAGCATCTGCTCGAGAGCCACACCACGACGGAGGACGTCGGGCGCATTGCTGCCGCAGCCGG CGTCAAGACGCTGGTGCTGAGCCACTTCGTGCCCGGCGATGATCCCGAAGTGACCGACGAGGATTGGACCCGCGACGTCA AGAAGAACTACACGGGCCGCATCCTGGTGGCGAAGGATCTGATGGAATTGAAGCTGCCGGTTTGA
Upstream 100 bases:
>100_bases TGCGCTGATCGCCATCGCCGTCATCTTCGGCCTCCCGGCCCTCGACGGCGTGCTCGGCCGCGGCTAGCCTCGCGGCAACG AGACCGGCCGGGAGGACGCC
Downstream 100 bases:
>100_bases CTCACGTCGGGTGGGCAAAGCAGCCGCCGGAGGCGGCAGCGTGGCCACCGTCTCTCCGCGAGCTCGTCGGCTCGATGGTG GGCACGGCGCCCCTTCGATC
Product: beta-lactamase family hydrolase
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MINRRTMLSLAMGTAGAMVAPSVFAQGPKTGTRIIFLGTKGGPRVGIGASNPANLVVVNGTPFVIDCGMGVSRQLVSAGV PIPSVKYILISHHHSDHNLEYGNLFYNAWAAGLSTPIQSFGPKGLEAMTRSFWETNKFDVDTRIDDEGRPDPRPMLIAKD IDADGVVVKTADVTVTAFRTPHPPITDNFAYKFETPDGTIVFSSDTAYNPKLADFAKGADVLVHECLYVPAVDRLVIKTK NGSTLKKHLLESHTTTEDVGRIAAAAGVKTLVLSHFVPGDDPEVTDEDWTRDVKKNYTGRILVAKDLMELKLPV
Sequences:
>Translated_314_residues MINRRTMLSLAMGTAGAMVAPSVFAQGPKTGTRIIFLGTKGGPRVGIGASNPANLVVVNGTPFVIDCGMGVSRQLVSAGV PIPSVKYILISHHHSDHNLEYGNLFYNAWAAGLSTPIQSFGPKGLEAMTRSFWETNKFDVDTRIDDEGRPDPRPMLIAKD IDADGVVVKTADVTVTAFRTPHPPITDNFAYKFETPDGTIVFSSDTAYNPKLADFAKGADVLVHECLYVPAVDRLVIKTK NGSTLKKHLLESHTTTEDVGRIAAAAGVKTLVLSHFVPGDDPEVTDEDWTRDVKKNYTGRILVAKDLMELKLPV >Mature_314_residues MINRRTMLSLAMGTAGAMVAPSVFAQGPKTGTRIIFLGTKGGPRVGIGASNPANLVVVNGTPFVIDCGMGVSRQLVSAGV PIPSVKYILISHHHSDHNLEYGNLFYNAWAAGLSTPIQSFGPKGLEAMTRSFWETNKFDVDTRIDDEGRPDPRPMLIAKD IDADGVVVKTADVTVTAFRTPHPPITDNFAYKFETPDGTIVFSSDTAYNPKLADFAKGADVLVHECLYVPAVDRLVIKTK NGSTLKKHLLESHTTTEDVGRIAAAAGVKTLVLSHFVPGDDPEVTDEDWTRDVKKNYTGRILVAKDLMELKLPV
Specific function: May function as a glycosulphohydrolase involved with desulfation of sulfated polysaccharides [H]
COG id: COG1234
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the atsA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 33958; Mature: 33958
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINRRTMLSLAMGTAGAMVAPSVFAQGPKTGTRIIFLGTKGGPRVGIGASNPANLVVVNG CCCCCEEEEEHHCCCCCHHCCHHHHCCCCCCCEEEEEECCCCCEEECCCCCCCCEEEECC TPFVIDCGMGVSRQLVSAGVPIPSVKYILISHHHSDHNLEYGNLFYNAWAAGLSTPIQSF CCEEEECCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCEECCEEHHHHHHHHCCCHHHC GPKGLEAMTRSFWETNKFDVDTRIDDEGRPDPRPMLIAKDIDADGVVVKTADVTVTAFRT CCCHHHHHHHHHHCCCCEEECCEECCCCCCCCCCEEEEECCCCCCEEEEECCEEEEEEEC PHPPITDNFAYKFETPDGTIVFSSDTAYNPKLADFAKGADVLVHECLYVPAVDRLVIKTK CCCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCEEEEEEC NGSTLKKHLLESHTTTEDVGRIAAAAGVKTLVLSHFVPGDDPEVTDEDWTRDVKKNYTGR CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCE ILVAKDLMELKLPV EEEEECHHHHCCCC >Mature Secondary Structure MINRRTMLSLAMGTAGAMVAPSVFAQGPKTGTRIIFLGTKGGPRVGIGASNPANLVVVNG CCCCCEEEEEHHCCCCCHHCCHHHHCCCCCCCEEEEEECCCCCEEECCCCCCCCEEEECC TPFVIDCGMGVSRQLVSAGVPIPSVKYILISHHHSDHNLEYGNLFYNAWAAGLSTPIQSF CCEEEECCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCEECCEEHHHHHHHHCCCHHHC GPKGLEAMTRSFWETNKFDVDTRIDDEGRPDPRPMLIAKDIDADGVVVKTADVTVTAFRT CCCHHHHHHHHHHCCCCEEECCEECCCCCCCCCCEEEEECCCCCCEEEEECCEEEEEEEC PHPPITDNFAYKFETPDGTIVFSSDTAYNPKLADFAKGADVLVHECLYVPAVDRLVIKTK CCCCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHCCCCCEEEEEEC NGSTLKKHLLESHTTTEDVGRIAAAAGVKTLVLSHFVPGDDPEVTDEDWTRDVKKNYTGR CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCE ILVAKDLMELKLPV EEEEECHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8535517 [H]