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The map label for this gene is ybjT [H]

Identifier: 146337299

GI number: 146337299

Start: 143495

End: 144463

Strand: Direct

Name: ybjT [H]

Synonym: BRADO0128

Alternate gene names: 146337299

Gene position: 143495-144463 (Clockwise)

Preceding gene: 146337297

Following gene: 146337301

Centisome position: 1.92

GC content: 71.52

Gene sequence:

>969_bases
ATGGCATCGAATCTGGACACCCTCGTCACCGTGTTCGGCGGCTCCGGCTTCGTCGGCCGCAATGTCGTCCGGGCGCTGGC
CAAGCGCGACTACCGCATCCGCGTCGCGGTGCGCCGGCCGGAGCTCGCGGGCCATCTGCAGCCGCTCGGCCGCGTCGGCC
AGATCCACACCGTTCAGGCCAATCTGCGCTATCCCGACTCGGTCGCGGCCGCGCTGCGCGACAGCCATGTCGCGATCAAC
CTGGTGGGCATCCTGACCGAGAGCGGCGCGCAGACGTTCGACGCCGTGCAGGCCGAGGGCGCGGCCACCGTGGCCAAGGC
CGCGGCCGCCGCCGGCGCGCGGATGGTGCAGGTCTCGGCGATTGGCGCGGACGCCGAGTCGGCCTCGGCCTATGCGCGCG
CCAAGGCCGCCGGCGAGGCTGCCGTGCTGGCCGCGGTGCCGGAGGCGGTGATCATGCGTCCGTCGGTGGTGTTCGGCCCC
GAGGACCAGTTCACCAACCGCTTCGCCGGCCTTGCGCGGATCGCGCCGTTCCTGCCGCTGGTCGGCGGCGGCGAGACCAA
GATGCAGCCGGTCTATGTCGGCGACGTCGCGACCGCGGTGGCTGACGCCGTCGATGGCAAGGCGCAGCCGGGCGCGACCT
ACGAGCTGGGCGGACCGGAGGTGCTGAGCTTCCGCGAGATCCTGAAGATCATCCTCGACATCACCGACCGCGACCGCGCG
CTGCTGCCGCTGCCGTTCGGCTTGGCGAAGCTGCAGGCCACCTTCCTCCAATTCGCGCCGGGCCCGCTGAAGCTGACGCC
CGACCAGGTCGAGCTGCTGCGCCATGACAACGTGGTGTCAGAGGCCGCGAAGGCCGCCGGGCTGACCTTGCAGGGCCTCG
GCATCACGCCGGATTCGCTCGAGGCCGTCGGCCCGCAATATCTCTGGCGCTTCCGCCCGGCCGGGCAATTCCAGCGCAAG
AATGCGTGA

Upstream 100 bases:

>100_bases
TACAGCAGCGAAAGATGGCGGGCCGCGGGGTGCGAATCGCCGCTGACAGGCTTCTCGTCCGGGGCGGATCGACCGCCCGG
CTATCCCAGGAATGATCCCA

Downstream 100 bases:

>100_bases
GAGGCCCGTAGGGTGGGCAAAGCGAAGCGTGCCCACCATCCTGCGACGGCAGTCTAAGTGAAGACGGTGGGCACGGCGCT
GCGCGCCTTTGCCCACCCAC

Product: putative NAD dependent epimerase/dehydratase family protein

Products: NAD+; ubiquinol

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MASNLDTLVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPELAGHLQPLGRVGQIHTVQANLRYPDSVAAALRDSHVAIN
LVGILTESGAQTFDAVQAEGAATVAKAAAAAGARMVQVSAIGADAESASAYARAKAAGEAAVLAAVPEAVIMRPSVVFGP
EDQFTNRFAGLARIAPFLPLVGGGETKMQPVYVGDVATAVADAVDGKAQPGATYELGGPEVLSFREILKIILDITDRDRA
LLPLPFGLAKLQATFLQFAPGPLKLTPDQVELLRHDNVVSEAAKAAGLTLQGLGITPDSLEAVGPQYLWRFRPAGQFQRK
NA

Sequences:

>Translated_322_residues
MASNLDTLVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPELAGHLQPLGRVGQIHTVQANLRYPDSVAAALRDSHVAIN
LVGILTESGAQTFDAVQAEGAATVAKAAAAAGARMVQVSAIGADAESASAYARAKAAGEAAVLAAVPEAVIMRPSVVFGP
EDQFTNRFAGLARIAPFLPLVGGGETKMQPVYVGDVATAVADAVDGKAQPGATYELGGPEVLSFREILKIILDITDRDRA
LLPLPFGLAKLQATFLQFAPGPLKLTPDQVELLRHDNVVSEAAKAAGLTLQGLGITPDSLEAVGPQYLWRFRPAGQFQRK
NA
>Mature_321_residues
ASNLDTLVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPELAGHLQPLGRVGQIHTVQANLRYPDSVAAALRDSHVAINL
VGILTESGAQTFDAVQAEGAATVAKAAAAAGARMVQVSAIGADAESASAYARAKAAGEAAVLAAVPEAVIMRPSVVFGPE
DQFTNRFAGLARIAPFLPLVGGGETKMQPVYVGDVATAVADAVDGKAQPGATYELGGPEVLSFREILKIILDITDRDRAL
LPLPFGLAKLQATFLQFAPGPLKLTPDQVELLRHDNVVSEAAKAAGLTLQGLGITPDSLEAVGPQYLWRFRPAGQFQRKN
A

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=297, Percent_Identity=32.6599326599327, Blast_Score=141, Evalue=1e-33,
Organism=Escherichia coli, GI87081793, Length=250, Percent_Identity=22, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17556106, Length=275, Percent_Identity=32, Blast_Score=120, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24667554, Length=324, Percent_Identity=30.5555555555556, Blast_Score=116, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021295
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF11066 DUF2867; PF01370 Epimerase [H]

EC number: 1.6.5.3; 1.6.99.3

Molecular weight: Translated: 33749; Mature: 33618

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNLDTLVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPELAGHLQPLGRVGQIHTVQA
CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEEE
NLRYPDSVAAALRDSHVAINLVGILTESGAQTFDAVQAEGAATVAKAAAAAGARMVQVSA
CCCCCHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHCCCEEEEEEE
IGADAESASAYARAKAAGEAAVLAAVPEAVIMRPSVVFGPEDQFTNRFAGLARIAPFLPL
ECCCCHHHHHHHHHHHCCCCCEEHHCCHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCC
VGGGETKMQPVYVGDVATAVADAVDGKAQPGATYELGGPEVLSFREILKIILDITDRDRA
CCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCE
LLPLPFGLAKLQATFLQFAPGPLKLTPDQVELLRHDNVVSEAAKAAGLTLQGLGITPDSL
EEECCCCHHHHHHHHHHCCCCCCEECHHHHHHHHHCCHHHHHHHHCCCEEEECCCCCHHH
EAVGPQYLWRFRPAGQFQRKNA
HHCCHHHHEEECCCCCCCCCCC
>Mature Secondary Structure 
ASNLDTLVTVFGGSGFVGRNVVRALAKRDYRIRVAVRRPELAGHLQPLGRVGQIHTVQA
CCCCCEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCEEEEEE
NLRYPDSVAAALRDSHVAINLVGILTESGAQTFDAVQAEGAATVAKAAAAAGARMVQVSA
CCCCCHHHHHHHCCCCEEEEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHCCCEEEEEEE
IGADAESASAYARAKAAGEAAVLAAVPEAVIMRPSVVFGPEDQFTNRFAGLARIAPFLPL
ECCCCHHHHHHHHHHHCCCCCEEHHCCHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCC
VGGGETKMQPVYVGDVATAVADAVDGKAQPGATYELGGPEVLSFREILKIILDITDRDRA
CCCCCCCCCCEEECHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCE
LLPLPFGLAKLQATFLQFAPGPLKLTPDQVELLRHDNVVSEAAKAAGLTLQGLGITPDSL
EEECCCCHHHHHHHHHHCCCCCCEECHHHHHHHHHCCHHHHHHHHCCCEEEECCCCCHHH
EAVGPQYLWRFRPAGQFQRKNA
HHCCHHHHEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]