| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337294
Identifier: 146337294
GI number: 146337294
Start: 136094
End: 136858
Strand: Reverse
Name: 146337294
Synonym: BRADO0121
Alternate gene names: NA
Gene position: 136858-136094 (Counterclockwise)
Preceding gene: 146337295
Following gene: 146337290
Centisome position: 1.84
GC content: 66.8
Gene sequence:
>765_bases ATGACACGACTGCTCGCGCTGCTCGCCGCCATCAGCGTCCTGATCGGTTCAGCCGAAGCGCGCTCGCTCGACGCGATCCG TTCGCTCGGCCAGATCGGGCTGTGCGCCCATCCCAATTCGCTGCCCTTCGCCAGCAAGGCCGGCGACCCGCCGGGCTTCC AGGTTGAGATGGGGCAGGCGCTGGCGCGCGAGCTCGGCGTGTCGCTTCGGCTCGACTGGATCATCACCATGTTCCAGATG CGCGCGGCCGGCTGCGACCTCGTCATGGACGTCATCGCCGATCCCGAGGCGCTGGGGGAAATTCGGCTGAAGACGACCAA GCCCTACTATCACACGGGCGTGGCGCTGGCGGTGCCGCAGGATAGCAGGCTCACGTCCATTTCCGGCCTCGACCAGACGA CGAAGGTCGGGGTTCAGGTCGGATCGATCGCGGCGATGCTGATCAGCCAGCGCCATGTGCCGATATCGACCTTCGGCTTC GAGATCGACAGCCTCGATGCGCTGGCCAATCACGAGATCGCTGCCGCCGCGGTGACGCCGGCCAATGCCGCCTATTACAA CCAGACCCATCCGGACAAGACGCTCCGGATCATTGCCCTCGACGACAGCGAGCCAAGCCTGAACTGGAACGTGGCCATCG GCATGGTCCGCCCGGACGACGCGCTGCGCGAGGCCATGGAGACCGCGCTGGCCCGCCTGCGCGCCGACGGCACCGTCGAG CGCATCTACGCCCGCTATGGCGTGACCTTGCAGGAGCCGAAGTAG
Upstream 100 bases:
>100_bases GCGTTGAAGCCTGATTAGGCGGCGTTGCGACGGCGCCCCGCGTGGCCGGCCTCGCCGAGCCGCACACCAGAGTGAGGCTG ATGCTCAGAGAGACCACGAC
Downstream 100 bases:
>100_bases GTGTGAGTGTCGCTCTTGCGGCGCGCCTCTGGTCGAAGAATGCCTGGCGATTCTGCTTGGCGCGAGGCTGGCGCCACACC CACCGGTGTCGTCCCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTRLLALLAAISVLIGSAEARSLDAIRSLGQIGLCAHPNSLPFASKAGDPPGFQVEMGQALARELGVSLRLDWIITMFQM RAAGCDLVMDVIADPEALGEIRLKTTKPYYHTGVALAVPQDSRLTSISGLDQTTKVGVQVGSIAAMLISQRHVPISTFGF EIDSLDALANHEIAAAAVTPANAAYYNQTHPDKTLRIIALDDSEPSLNWNVAIGMVRPDDALREAMETALARLRADGTVE RIYARYGVTLQEPK
Sequences:
>Translated_254_residues MTRLLALLAAISVLIGSAEARSLDAIRSLGQIGLCAHPNSLPFASKAGDPPGFQVEMGQALARELGVSLRLDWIITMFQM RAAGCDLVMDVIADPEALGEIRLKTTKPYYHTGVALAVPQDSRLTSISGLDQTTKVGVQVGSIAAMLISQRHVPISTFGF EIDSLDALANHEIAAAAVTPANAAYYNQTHPDKTLRIIALDDSEPSLNWNVAIGMVRPDDALREAMETALARLRADGTVE RIYARYGVTLQEPK >Mature_253_residues TRLLALLAAISVLIGSAEARSLDAIRSLGQIGLCAHPNSLPFASKAGDPPGFQVEMGQALARELGVSLRLDWIITMFQMR AAGCDLVMDVIADPEALGEIRLKTTKPYYHTGVALAVPQDSRLTSISGLDQTTKVGVQVGSIAAMLISQRHVPISTFGFE IDSLDALANHEIAAAAVTPANAAYYNQTHPDKTLRIIALDDSEPSLNWNVAIGMVRPDDALREAMETALARLRADGTVER IYARYGVTLQEPK
Specific function: Unknown
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27278; Mature: 27146
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLLALLAAISVLIGSAEARSLDAIRSLGQIGLCAHPNSLPFASKAGDPPGFQVEMGQA CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEHHHHH LARELGVSLRLDWIITMFQMRAAGCDLVMDVIADPEALGEIRLKTTKPYYHTGVALAVPQ HHHHHCCEEEHHHHHHHHHHHHCCHHHHHHHHCCHHHHCCEEEEECCCEEECCEEEEECC DSRLTSISGLDQTTKVGVQVGSIAAMLISQRHVPISTFGFEIDSLDALANHEIAAAAVTP CCCCCCCCCCCCHHHHHEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEEECC ANAAYYNQTHPDKTLRIIALDDSEPSLNWNVAIGMVRPDDALREAMETALARLRADGTVE CCCHHCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHH RIYARYGVTLQEPK HHHHHHCCEEECCC >Mature Secondary Structure TRLLALLAAISVLIGSAEARSLDAIRSLGQIGLCAHPNSLPFASKAGDPPGFQVEMGQA HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEHHHHH LARELGVSLRLDWIITMFQMRAAGCDLVMDVIADPEALGEIRLKTTKPYYHTGVALAVPQ HHHHHCCEEEHHHHHHHHHHHHCCHHHHHHHHCCHHHHCCEEEEECCCEEECCEEEEECC DSRLTSISGLDQTTKVGVQVGSIAAMLISQRHVPISTFGFEIDSLDALANHEIAAAAVTP CCCCCCCCCCCCHHHHHEEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEEEEEECC ANAAYYNQTHPDKTLRIIALDDSEPSLNWNVAIGMVRPDDALREAMETALARLRADGTVE CCCHHCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHCCCCHHH RIYARYGVTLQEPK HHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA