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The map label for this gene is ygiK [H]

Identifier: 146337293

GI number: 146337293

Start: 134484

End: 135776

Strand: Direct

Name: ygiK [H]

Synonym: BRADO0120

Alternate gene names: 146337293

Gene position: 134484-135776 (Clockwise)

Preceding gene: 146337292

Following gene: 146337297

Centisome position: 1.8

GC content: 64.19

Gene sequence:

>1293_bases
ATGGAACTGATCATTCTCGGCGCCACCTTCTTCGGCTTCCTGATCCTCGGCGTCCCCGTCGCATTCGCGATCGGCCTCTC
CGCCATCTGCACCATTCTCTATGAAGGTCTGCCGGTCGCGGTGATCTTCCAGCAGATGATGTCCGGGATGAACATCTTCT
CGTTCCTGGCGATCCCGTTCTTCGTCTTCAGCGGCGAGCTGATGCTGCATGGCGGCGTCGCCGACAAGATCGTGCAGCTC
GCCAAGAATCTGGTCGGCCACATCCGCGGCGGCTTGGGCATGTCGAACGTCGTGGCCTGCACCTTGTTCGGCGGCGTCTC
CGGCTCCCCGGTCGCCGACGTCTCGGCGATGGGCGCGGTGATGATCCCGATGATGAAGAAGGAAGGGTTCGACACCGACT
ACGCCGTCAACGTCACCACCCATGCCTCGCTGGTCGGCGCGCTGATGCCGACCAGCCACAACATGATCATCTATGCGCTC
GCCGCCGGCGGCAAGGTGTCGATCGGCGCGCTGATCGCCGCAGGCCTGCTGCCGGCGCTGGTGCTGATGGTCTGCATGCT
CGTCGCCGCCTACGCGGTCGCAGTGAAGCGCGGCTACCCGGCCGGCAAGTTTCCCGGCTGGGCGGAAGTAGCTCGCTCGT
TCGCGGCGGCGCTGCCCGGCCTGCTGATCGTCGGCATCATCCTGGCGGGCATCCTCTCCGGCGTCTTCACCGCCACCGAA
TCCGCCGCCGTCGCGGTGACCTACACGATCGTGCTGACGTTCTTCATCTACCGCACCATGACGCTGAAGAACTTCCTGCG
GGCCGCCGCCAAGGCGGTGAAGACCACCGGTGTGGTGCTACTGCTGATAGGCGTCTCGACGATGTTCCAGTATCTGATGG
GACTCTACGAGGTGGCGGATTTCGCCGGCGACCTGATGAGCAAGGTCTCGTCGCAGCCCTGGATGATCTTCCTGCTGATC
AACATCATCCTGTTCCTGCTCGGCACCTTCATGGACATGGCGGCGACGATCCTGATCTGCACCCCGATCTTCCTGCCGAT
CGCGATGAAGGCCGGCATGGACCCCGTGCAGTTCGGCATGCTGATGCTGATCAACTGCGCGCTCGGCCTCAACACCCCGC
CGGTCGGCACCACCCAGTTCGTCGGCTGCGCCATCGGCGGCATCTCGGTCGGCGCGGTCATGCGCACCATCCTGCCGTTC
TACGCCGCCCTGATCGCCGCCCTGATGTTCGTGACCTACGTCCCGGCGTTCTCGCTGTGGCTGCCGCGATTGCTGATGGG
GTACAAGGGATGA

Upstream 100 bases:

>100_bases
TCGTCCGCTACATCCCGCTGATCGCCTCCGGCATCCTGATCGTCTCCTTCTCAATCGAGCACATCATCGCCCTGCTGCGC
GGTGAAGAGGTCGTCCCGTC

Downstream 100 bases:

>100_bases
CCGACAGCGTTCGCCATCCTTGGCCGCAAGCTTCGTCGGCGAACCGTACCTGAGATGCCCGGCTGATAGCCTCGTCCACG
GCTGTCGTCCCGGACAAGCC

Product: putative TRAP-type C4-dicarboxylate transport system large permease component DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MELIILGATFFGFLILGVPVAFAIGLSAICTILYEGLPVAVIFQQMMSGMNIFSFLAIPFFVFSGELMLHGGVADKIVQL
AKNLVGHIRGGLGMSNVVACTLFGGVSGSPVADVSAMGAVMIPMMKKEGFDTDYAVNVTTHASLVGALMPTSHNMIIYAL
AAGGKVSIGALIAAGLLPALVLMVCMLVAAYAVAVKRGYPAGKFPGWAEVARSFAAALPGLLIVGIILAGILSGVFTATE
SAAVAVTYTIVLTFFIYRTMTLKNFLRAAAKAVKTTGVVLLLIGVSTMFQYLMGLYEVADFAGDLMSKVSSQPWMIFLLI
NIILFLLGTFMDMAATILICTPIFLPIAMKAGMDPVQFGMLMLINCALGLNTPPVGTTQFVGCAIGGISVGAVMRTILPF
YAALIAALMFVTYVPAFSLWLPRLLMGYKG

Sequences:

>Translated_430_residues
MELIILGATFFGFLILGVPVAFAIGLSAICTILYEGLPVAVIFQQMMSGMNIFSFLAIPFFVFSGELMLHGGVADKIVQL
AKNLVGHIRGGLGMSNVVACTLFGGVSGSPVADVSAMGAVMIPMMKKEGFDTDYAVNVTTHASLVGALMPTSHNMIIYAL
AAGGKVSIGALIAAGLLPALVLMVCMLVAAYAVAVKRGYPAGKFPGWAEVARSFAAALPGLLIVGIILAGILSGVFTATE
SAAVAVTYTIVLTFFIYRTMTLKNFLRAAAKAVKTTGVVLLLIGVSTMFQYLMGLYEVADFAGDLMSKVSSQPWMIFLLI
NIILFLLGTFMDMAATILICTPIFLPIAMKAGMDPVQFGMLMLINCALGLNTPPVGTTQFVGCAIGGISVGAVMRTILPF
YAALIAALMFVTYVPAFSLWLPRLLMGYKG
>Mature_430_residues
MELIILGATFFGFLILGVPVAFAIGLSAICTILYEGLPVAVIFQQMMSGMNIFSFLAIPFFVFSGELMLHGGVADKIVQL
AKNLVGHIRGGLGMSNVVACTLFGGVSGSPVADVSAMGAVMIPMMKKEGFDTDYAVNVTTHASLVGALMPTSHNMIIYAL
AAGGKVSIGALIAAGLLPALVLMVCMLVAAYAVAVKRGYPAGKFPGWAEVARSFAAALPGLLIVGIILAGILSGVFTATE
SAAVAVTYTIVLTFFIYRTMTLKNFLRAAAKAVKTTGVVLLLIGVSTMFQYLMGLYEVADFAGDLMSKVSSQPWMIFLLI
NIILFLLGTFMDMAATILICTPIFLPIAMKAGMDPVQFGMLMLINCALGLNTPPVGTTQFVGCAIGGISVGAVMRTILPF
YAALIAALMFVTYVPAFSLWLPRLLMGYKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=416, Percent_Identity=31.0096153846154, Blast_Score=198, Evalue=7e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 45205; Mature: 45205

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIILGATFFGFLILGVPVAFAIGLSAICTILYEGLPVAVIFQQMMSGMNIFSFLAIPF
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHH
FVFSGELMLHGGVADKIVQLAKNLVGHIRGGLGMSNVVACTLFGGVSGSPVADVSAMGAV
HHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
MIPMMKKEGFDTDYAVNVTTHASLVGALMPTSHNMIIYALAAGGKVSIGALIAAGLLPAL
HHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
VLMVCMLVAAYAVAVKRGYPAGKFPGWAEVARSFAAALPGLLIVGIILAGILSGVFTATE
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SAAVAVTYTIVLTFFIYRTMTLKNFLRAAAKAVKTTGVVLLLIGVSTMFQYLMGLYEVAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGDLMSKVSSQPWMIFLLINIILFLLGTFMDMAATILICTPIFLPIAMKAGMDPVQFGM
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LMLINCALGLNTPPVGTTQFVGCAIGGISVGAVMRTILPFYAALIAALMFVTYVPAFSLW
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPRLLMGYKG
HHHHHHCCCC
>Mature Secondary Structure
MELIILGATFFGFLILGVPVAFAIGLSAICTILYEGLPVAVIFQQMMSGMNIFSFLAIPF
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHH
FVFSGELMLHGGVADKIVQLAKNLVGHIRGGLGMSNVVACTLFGGVSGSPVADVSAMGAV
HHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH
MIPMMKKEGFDTDYAVNVTTHASLVGALMPTSHNMIIYALAAGGKVSIGALIAAGLLPAL
HHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
VLMVCMLVAAYAVAVKRGYPAGKFPGWAEVARSFAAALPGLLIVGIILAGILSGVFTATE
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SAAVAVTYTIVLTFFIYRTMTLKNFLRAAAKAVKTTGVVLLLIGVSTMFQYLMGLYEVAD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGDLMSKVSSQPWMIFLLINIILFLLGTFMDMAATILICTPIFLPIAMKAGMDPVQFGM
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
LMLINCALGLNTPPVGTTQFVGCAIGGISVGAVMRTILPFYAALIAALMFVTYVPAFSLW
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPRLLMGYKG
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]