| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337208
Identifier: 146337208
GI number: 146337208
Start: 40714
End: 41208
Strand: Direct
Name: 146337208
Synonym: BRADO0034
Alternate gene names: NA
Gene position: 40714-41208 (Clockwise)
Preceding gene: 161353771
Following gene: 146337209
Centisome position: 0.55
GC content: 67.68
Gene sequence:
>495_bases ATGGCGGCGCAGCGGCAGAGCTATCAGACCGGCCACGCGCCGAAATGCCTGGTCGTGGTCGACGAGAGCGCCGAATGGGA CCGTGCGATCCGTTATGCCGGGCGCTGGGCGGTGCGCGGCGGCGGCCACATCGTCATGCTGCACATCATTGAGACCGAGG ACCAGAACCAGCAATGGCTGGGGGTCGCCGACCTGATGCGCGCGGAGGCGCAGGACGAGGCCAATGCCGCGCTCGATGAG GCGGCGGCGATGCTGGCCAACATCGGCGCTGCCACGCCGGAACGGGTGATCCGCGAGGGGGAGCCAACAACGCAGATCCT GGCAACGATCGAGCATGACAACGATATCGCGCTGCTGGTGCTGGCCGCGCATGCCGGCCCCGAAGGCCCGGGACCGCTGG TCACCCATGTCATCAAGACCGTCGGCGCCTTCCCGATCCCGCTGGTGATCGTCCCCGGCGATCTGAGCGACGCCGATATC GACGCGCTTTCATAG
Upstream 100 bases:
>100_bases CCCGCGTCCGTCAGATGGAACCCGCGGGCCCTCTCCCCAATCAAGACGGGCTGTGGCAGCATCGCGCCCCGATCGACGCG CAACGGCAGGCGGGACCACC
Downstream 100 bases:
>100_bases GGTTAAGCCCATAATGCGGGCGACACCCTCTTGATCGTGCGCGTCTCCTCGCCATCTGCTATGACGACACCACAGGCCGG CCTTGAACCGGCGCTGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: Universal Stress Family Protein; UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; UspA Protein
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MAAQRQSYQTGHAPKCLVVVDESAEWDRAIRYAGRWAVRGGGHIVMLHIIETEDQNQQWLGVADLMRAEAQDEANAALDE AAAMLANIGAATPERVIREGEPTTQILATIEHDNDIALLVLAAHAGPEGPGPLVTHVIKTVGAFPIPLVIVPGDLSDADI DALS
Sequences:
>Translated_164_residues MAAQRQSYQTGHAPKCLVVVDESAEWDRAIRYAGRWAVRGGGHIVMLHIIETEDQNQQWLGVADLMRAEAQDEANAALDE AAAMLANIGAATPERVIREGEPTTQILATIEHDNDIALLVLAAHAGPEGPGPLVTHVIKTVGAFPIPLVIVPGDLSDADI DALS >Mature_163_residues AAQRQSYQTGHAPKCLVVVDESAEWDRAIRYAGRWAVRGGGHIVMLHIIETEDQNQQWLGVADLMRAEAQDEANAALDEA AAMLANIGAATPERVIREGEPTTQILATIEHDNDIALLVLAAHAGPEGPGPLVTHVIKTVGAFPIPLVIVPGDLSDADID ALS
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17455; Mature: 17324
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAQRQSYQTGHAPKCLVVVDESAEWDRAIRYAGRWAVRGGGHIVMLHIIETEDQNQQWL CCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCEEEECCCEEEEEEEEECCCCCCCEE GVADLMRAEAQDEANAALDEAAAMLANIGAATPERVIREGEPTTQILATIEHDNDIALLV CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEECCCCEEEEE LAAHAGPEGPGPLVTHVIKTVGAFPIPLVIVPGDLSDADIDALS EEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure AAQRQSYQTGHAPKCLVVVDESAEWDRAIRYAGRWAVRGGGHIVMLHIIETEDQNQQWL CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHCCCEEEECCCEEEEEEEEECCCCCCCEE GVADLMRAEAQDEANAALDEAAAMLANIGAATPERVIREGEPTTQILATIEHDNDIALLV CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEEEECCCCEEEEE LAAHAGPEGPGPLVTHVIKTVGAFPIPLVIVPGDLSDADIDALS EEECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA