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The map label for this gene is yfhR [C]

Identifier: 146302771

GI number: 146302771

Start: 6083274

End: 6084089

Strand: Reverse

Name: yfhR [C]

Synonym: Fjoh_5044

Alternate gene names: 146302771

Gene position: 6084089-6083274 (Counterclockwise)

Preceding gene: 146302772

Following gene: 146302770

Centisome position: 99.79

GC content: 27.57

Gene sequence:

>816_bases
ATGGAAATTATTAAAACATTTAAATTTTTGATTATTGCGCTTTTGTGTTTTTTTCTGGTAATTTATATTTTAATAATTTC
CTATGTTTATTTTAATCAGGTTGAACTGGTTTTTCATAGTTCAAGACTGCCTAAAGATTATAAATTTGGATATCAGCAAA
AGTTTGAAGAAATTAATATTACATCGTTTGACGGAGTAAAGTTAAACGGGCTTTTATTTAAAGTTGAAAAATCGAAAGGA
CTTGTTTTTTATTTACATGGAAACGCTGGGACACTTGAAACTTGGGGAAGTATTGCAAAAAGATATACTTCTTTAGGTTA
TGACATTTTTATTCTTGATTATAGAAGTTTTGGAAAAAGTGAGGGAAAAATTGAAGACGAAGAACAATTATCAAAAGATA
TTTCGATCGTTTACAACTCTATTTCTAAAAGGTATTCAAAAGATAAAATTATAATTACCGGATATTCTATTGGGTCTGGG
TTTGCTGTAAAACTAGCTGTAGAGAACAAACCTAAAGCTTTAATACTTCAGGCTCCCTATTATAGTTTTTTGGAGCTGTC
AAGTTCACGAGTTCCATTTTTTCCGGATTTTATGAAAAAGTTCAGTTTGGAAACTAATGTTTATCTTCCAGAAGTAAAAG
CTCCAATTTATATTTTTCACGGAACAGATGATCAATTAATTCCTTTTAATAATTCAGTTAGATTAAAGGAACTTTTAAAG
TCAAAAATAAATTTTTATCCTTTAAAAAATCAAGGACATATTGGAGTAAATGAGAATGAAGATTTTCAAAATCAGTTAAA
AATCATATTAGAATAA

Upstream 100 bases:

>100_bases
ATAACGGTGCTTTTTTGTTTTTGTTTTGGGCAGGAACAGATTATAACCTGACTTATGAATATCAGAGGAAATAAGAATAT
AAAATTTTATAATTCGATTA

Downstream 100 bases:

>100_bases
AATTAATAATTATAAAAAATAAATGCCATGGGATTAATGAAAGTGTATTCAGGAAGCGAAATACTTGCAATTGCTTTGCA
GGAAAGATTAGAAGAAGCTG

Product: dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MEIIKTFKFLIIALLCFFLVIYILIISYVYFNQVELVFHSSRLPKDYKFGYQQKFEEINITSFDGVKLNGLLFKVEKSKG
LVFYLHGNAGTLETWGSIAKRYTSLGYDIFILDYRSFGKSEGKIEDEEQLSKDISIVYNSISKRYSKDKIIITGYSIGSG
FAVKLAVENKPKALILQAPYYSFLELSSSRVPFFPDFMKKFSLETNVYLPEVKAPIYIFHGTDDQLIPFNNSVRLKELLK
SKINFYPLKNQGHIGVNENEDFQNQLKIILE

Sequences:

>Translated_271_residues
MEIIKTFKFLIIALLCFFLVIYILIISYVYFNQVELVFHSSRLPKDYKFGYQQKFEEINITSFDGVKLNGLLFKVEKSKG
LVFYLHGNAGTLETWGSIAKRYTSLGYDIFILDYRSFGKSEGKIEDEEQLSKDISIVYNSISKRYSKDKIIITGYSIGSG
FAVKLAVENKPKALILQAPYYSFLELSSSRVPFFPDFMKKFSLETNVYLPEVKAPIYIFHGTDDQLIPFNNSVRLKELLK
SKINFYPLKNQGHIGVNENEDFQNQLKIILE
>Mature_271_residues
MEIIKTFKFLIIALLCFFLVIYILIISYVYFNQVELVFHSSRLPKDYKFGYQQKFEEINITSFDGVKLNGLLFKVEKSKG
LVFYLHGNAGTLETWGSIAKRYTSLGYDIFILDYRSFGKSEGKIEDEEQLSKDISIVYNSISKRYSKDKIIITGYSIGSG
FAVKLAVENKPKALILQAPYYSFLELSSSRVPFFPDFMKKFSLETNVYLPEVKAPIYIFHGTDDQLIPFNNSVRLKELLK
SKINFYPLKNQGHIGVNENEDFQNQLKIILE

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To S.pombe bem46 and yeast YNL320w [H]

Homologues:

Organism=Homo sapiens, GI109689718, Length=198, Percent_Identity=30.8080808080808, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI24308097, Length=201, Percent_Identity=30.3482587064677, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI194306564, Length=221, Percent_Identity=27.6018099547511, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI194306562, Length=181, Percent_Identity=30.3867403314917, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI151301175, Length=195, Percent_Identity=29.2307692307692, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI71051602, Length=220, Percent_Identity=26.8181818181818, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI71051600, Length=220, Percent_Identity=26.8181818181818, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI226510965, Length=265, Percent_Identity=21.8867924528302, Blast_Score=67, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71988362, Length=195, Percent_Identity=27.6923076923077, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17532877, Length=175, Percent_Identity=29.7142857142857, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24655467, Length=178, Percent_Identity=28.6516853932584, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24655464, Length=178, Percent_Identity=28.6516853932584, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI281362521, Length=204, Percent_Identity=29.9019607843137, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI281362519, Length=204, Percent_Identity=29.9019607843137, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI28571878, Length=204, Percent_Identity=29.9019607843137, Blast_Score=78, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 31347; Mature: 31347

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIKTFKFLIIALLCFFLVIYILIISYVYFNQVELVFHSSRLPKDYKFGYQQKFEEINI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHCCCHHHHHHHCCC
TSFDGVKLNGLLFKVEKSKGLVFYLHGNAGTLETWGSIAKRYTSLGYDIFILDYRSFGKS
EEECCEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
EGKIEDEEQLSKDISIVYNSISKRYSKDKIIITGYSIGSGFAVKLAVENKPKALILQAPY
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEECCC
YSFLELSSSRVPFFPDFMKKFSLETNVYLPEVKAPIYIFHGTDDQLIPFNNSVRLKELLK
HHHHHHCCCCCCCCHHHHHHHCCCCCEECCCCCCCEEEEECCCCCEECCCCCHHHHHHHH
SKINFYPLKNQGHIGVNENEDFQNQLKIILE
HHCCEEECCCCCCCCCCCCCCHHHHHHEECC
>Mature Secondary Structure
MEIIKTFKFLIIALLCFFLVIYILIISYVYFNQVELVFHSSRLPKDYKFGYQQKFEEINI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHCCCHHHHHHHCCC
TSFDGVKLNGLLFKVEKSKGLVFYLHGNAGTLETWGSIAKRYTSLGYDIFILDYRSFGKS
EEECCEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCC
EGKIEDEEQLSKDISIVYNSISKRYSKDKIIITGYSIGSGFAVKLAVENKPKALILQAPY
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEEEEEECCCCCEEEEECCC
YSFLELSSSRVPFFPDFMKKFSLETNVYLPEVKAPIYIFHGTDDQLIPFNNSVRLKELLK
HHHHHHCCCCCCCCHHHHHHHCCCCCEECCCCCCCEEEEECCCCCEECCCCCHHHHHHHH
SKINFYPLKNQGHIGVNENEDFQNQLKIILE
HHCCEEECCCCCCCCCCCCCCHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]