Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302767

Identifier: 146302767

GI number: 146302767

Start: 6080948

End: 6081532

Strand: Direct

Name: 146302767

Synonym: Fjoh_5040

Alternate gene names: NA

Gene position: 6080948-6081532 (Clockwise)

Preceding gene: 146302765

Following gene: 146302780

Centisome position: 99.74

GC content: 34.19

Gene sequence:

>585_bases
ATGAAATGGGAAAGCCGAAAACCAAAGAGAGTAGGCAAAATTAAAATACAAATACCACGCTTTATGAAAGCATTTTTACC
CACAATCTGCTTGATGTTCTTAACCGTTTTTAGTTCGCAAGCGCAAACTACTAATGCCCCAGTTGCAAATCCATTTCCTT
CTATCAGCACTTTAACAACTTGGGCAAGTTTAAATTCGCAGCAGCAATTTGATGTTGCTATTCGTGCAGTTGGATTTAAA
TTTGAAGTAAAAGAACCAGGTGAAGGATCTACAGCCTATACTTACATTCGTAAAGTAACTGTAAACGAAGTAAATTATAC
TGATAGAATTGTTTACAGAATTACAAACAACAACTCAGCAAGTATCATTTCATTAGTAACTGCTTCTACAGATTTAGTAA
GTTTATATACACCGCAATTGGCTACTTTTAAAAACAACAATTGTAAAACTGAAATGTCTAAAGATAAAAACACAACTTGC
AGCTGTTACGAAAGTGCAAATTTTGCAATCGATCTTTGCGACGAGCGTGTAAAACTTACAATGGGTGACGGAAACAAGTA
TTTTGTTTCTGTAGCAAAAAAATAA

Upstream 100 bases:

>100_bases
TTCGGTTTTGAGAATTTTAGATGGTTTTGATTAATTTAATAATAAATCGAACATAACAATTTTGAATTTTACTCGTTATG
TTGTTGTTTTGTGTTACAAA

Downstream 100 bases:

>100_bases
TTAAAGAAACTACGTTTTCCAAATCTTTGCAGGTTTTATAAGCTTACAAAGATTTGGAACGCATTTCTTTTTAAAATCTA
TAAGTTTGGATTTTTGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKWESRKPKRVGKIKIQIPRFMKAFLPTICLMFLTVFSSQAQTTNAPVANPFPSISTLTTWASLNSQQQFDVAIRAVGFK
FEVKEPGEGSTAYTYIRKVTVNEVNYTDRIVYRITNNNSASIISLVTASTDLVSLYTPQLATFKNNNCKTEMSKDKNTTC
SCYESANFAIDLCDERVKLTMGDGNKYFVSVAKK

Sequences:

>Translated_194_residues
MKWESRKPKRVGKIKIQIPRFMKAFLPTICLMFLTVFSSQAQTTNAPVANPFPSISTLTTWASLNSQQQFDVAIRAVGFK
FEVKEPGEGSTAYTYIRKVTVNEVNYTDRIVYRITNNNSASIISLVTASTDLVSLYTPQLATFKNNNCKTEMSKDKNTTC
SCYESANFAIDLCDERVKLTMGDGNKYFVSVAKK
>Mature_194_residues
MKWESRKPKRVGKIKIQIPRFMKAFLPTICLMFLTVFSSQAQTTNAPVANPFPSISTLTTWASLNSQQQFDVAIRAVGFK
FEVKEPGEGSTAYTYIRKVTVNEVNYTDRIVYRITNNNSASIISLVTASTDLVSLYTPQLATFKNNNCKTEMSKDKNTTC
SCYESANFAIDLCDERVKLTMGDGNKYFVSVAKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21791; Mature: 21791

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWESRKPKRVGKIKIQIPRFMKAFLPTICLMFLTVFSSQAQTTNAPVANPFPSISTLTT
CCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
WASLNSQQQFDVAIRAVGFKFEVKEPGEGSTAYTYIRKVTVNEVNYTDRIVYRITNNNSA
HHHCCCCCHHEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCC
SIISLVTASTDLVSLYTPQLATFKNNNCKTEMSKDKNTTCSCYESANFAIDLCDERVKLT
EEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEECCCEEEEE
MGDGNKYFVSVAKK
ECCCCEEEEEEECC
>Mature Secondary Structure
MKWESRKPKRVGKIKIQIPRFMKAFLPTICLMFLTVFSSQAQTTNAPVANPFPSISTLTT
CCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
WASLNSQQQFDVAIRAVGFKFEVKEPGEGSTAYTYIRKVTVNEVNYTDRIVYRITNNNSA
HHHCCCCCHHEEEEEEEEEEEEECCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCC
SIISLVTASTDLVSLYTPQLATFKNNNCKTEMSKDKNTTCSCYESANFAIDLCDERVKLT
EEEEEEECCCCEEEEECCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEEEECCCEEEEE
MGDGNKYFVSVAKK
ECCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA