| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302672
Identifier: 146302672
GI number: 146302672
Start: 5973048
End: 5974139
Strand: Reverse
Name: 146302672
Synonym: Fjoh_4945
Alternate gene names: NA
Gene position: 5974139-5973048 (Counterclockwise)
Preceding gene: 146302673
Following gene: 146302666
Centisome position: 97.99
GC content: 35.9
Gene sequence:
>1092_bases ATGAAAAAAGTATTTTACGTTTTAGCTGCCACGTTAACGAGTTCTTTTGCTTTTGCGCAAGAGGATGAAACATCAACTCC GCCGGCAACAACTTGGGGAGGGTCTGCAGATGCATACTATAAATATGATTTTTCTAAACAAATGAATGGATTAACGAGCT TTACCAACTCACAGGATTCATTTGAATTAGGAATGGCTTCGATCGAAGCAAGTCATACTTTCGGAAAAGCTTCTGTTTTT GTTGACTTAGGATTCGGGAAAAGAGCAGGGGAATTTTCATACAATGAAACAACAGATAAAGATATTAATGCTAAATTTTT AATTAAACAATTATTTTTTACTTACCAGATTACAGACGAATTTAAAGTGGTTGCAGGTAGTTTTGGTACTCACATTGGAT ACGAAGTGTTAGATGCTGTAGACAATAAAAACTACAGTATGTCATACGCTTTCTCTTATGGGCCATTTTTTAATACAGGG GTAAAAGCACAATATACTGCAGGTAAATTTACTGCCATGCTGGGTATAACCAACCCAACTGACTTTAAATCTGCAATGGA TGCCGGATCAAGCCAAAAAACATATATCGGACAAGTTGGGTATATAGGTGAAACTGGAAGTGCTTATTTAAATTTTACAT CAGGAAGTACAAACCCTACGCCGGGAAGTTTGATTCCTGTTTCAAATGAAAATAAAACACAGTTCGATTTAACTGCTTCA AAAACTATCAGCGATAGTTTTGGATTGGGTTTAAATGCAACCTATGCTAAAACAAAACATGATTTTGACAGCACATTAGA CGGCGAATGGTTCTCATTAGTAGGATACGCAAATTACTCATTCAGCCCATCATTGTTATTGGCTTACAGAATGGAATATT TTGATGCTAAAGATGCTGCTCCAAGTTTAGGAACATTAACAGGATCAAGTGTATTTGCTAATACAATTTCATTAAACTAT AAAGTAGGGAAATTGACAATAATTCCCGAGTTAAGATACGACGCTGCTTCTGAAGATATCTTTTTAGATAAAGACGGTGC TCCAACAGGAGGTTCATTCTTCGGATTAATTGCTACAACATACTCTTTCTAG
Upstream 100 bases:
>100_bases AGGGGAAGATTCAAGGTTTTAAAAATGACTTATACTATTAAATAGATATATAAAAGATTAACTAACCAAAATCAATTAAT AACTAAAAACCAATTAACAC
Downstream 100 bases:
>100_bases AGATAAAGATTGATATTTTTTTTTTTTTTTTGGAGCTGTCGAAACATATTAATGTTTTGGCAGCTTTTTTATTGCTGTTT CTAATAGATTAGAGATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MKKVFYVLAATLTSSFAFAQEDETSTPPATTWGGSADAYYKYDFSKQMNGLTSFTNSQDSFELGMASIEASHTFGKASVF VDLGFGKRAGEFSYNETTDKDINAKFLIKQLFFTYQITDEFKVVAGSFGTHIGYEVLDAVDNKNYSMSYAFSYGPFFNTG VKAQYTAGKFTAMLGITNPTDFKSAMDAGSSQKTYIGQVGYIGETGSAYLNFTSGSTNPTPGSLIPVSNENKTQFDLTAS KTISDSFGLGLNATYAKTKHDFDSTLDGEWFSLVGYANYSFSPSLLLAYRMEYFDAKDAAPSLGTLTGSSVFANTISLNY KVGKLTIIPELRYDAASEDIFLDKDGAPTGGSFFGLIATTYSF
Sequences:
>Translated_363_residues MKKVFYVLAATLTSSFAFAQEDETSTPPATTWGGSADAYYKYDFSKQMNGLTSFTNSQDSFELGMASIEASHTFGKASVF VDLGFGKRAGEFSYNETTDKDINAKFLIKQLFFTYQITDEFKVVAGSFGTHIGYEVLDAVDNKNYSMSYAFSYGPFFNTG VKAQYTAGKFTAMLGITNPTDFKSAMDAGSSQKTYIGQVGYIGETGSAYLNFTSGSTNPTPGSLIPVSNENKTQFDLTAS KTISDSFGLGLNATYAKTKHDFDSTLDGEWFSLVGYANYSFSPSLLLAYRMEYFDAKDAAPSLGTLTGSSVFANTISLNY KVGKLTIIPELRYDAASEDIFLDKDGAPTGGSFFGLIATTYSF >Mature_363_residues MKKVFYVLAATLTSSFAFAQEDETSTPPATTWGGSADAYYKYDFSKQMNGLTSFTNSQDSFELGMASIEASHTFGKASVF VDLGFGKRAGEFSYNETTDKDINAKFLIKQLFFTYQITDEFKVVAGSFGTHIGYEVLDAVDNKNYSMSYAFSYGPFFNTG VKAQYTAGKFTAMLGITNPTDFKSAMDAGSSQKTYIGQVGYIGETGSAYLNFTSGSTNPTPGSLIPVSNENKTQFDLTAS KTISDSFGLGLNATYAKTKHDFDSTLDGEWFSLVGYANYSFSPSLLLAYRMEYFDAKDAAPSLGTLTGSSVFANTISLNY KVGKLTIIPELRYDAASEDIFLDKDGAPTGGSFFGLIATTYSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39402; Mature: 39402
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVFYVLAATLTSSFAFAQEDETSTPPATTWGGSADAYYKYDFSKQMNGLTSFTNSQDS CCCEEEEHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCHHHCCCCCCC FELGMASIEASHTFGKASVFVDLGFGKRAGEFSYNETTDKDINAKFLIKQLFFTYQITDE HHHHHEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEECCC FKVVAGSFGTHIGYEVLDAVDNKNYSMSYAFSYGPFFNTGVKAQYTAGKFTAMLGITNPT EEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCEEEEEEECCCCH DFKSAMDAGSSQKTYIGQVGYIGETGSAYLNFTSGSTNPTPGSLIPVSNENKTQFDLTAS HHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEECCCCCCEEEEEEEC KTISDSFGLGLNATYAKTKHDFDSTLDGEWFSLVGYANYSFSPSLLLAYRMEYFDAKDAA CCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEHHHHHCCCCCC PSLGTLTGSSVFANTISLNYKVGKLTIIPELRYDAASEDIFLDKDGAPTGGSFFGLIATT CCCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEEEEEE YSF ECC >Mature Secondary Structure MKKVFYVLAATLTSSFAFAQEDETSTPPATTWGGSADAYYKYDFSKQMNGLTSFTNSQDS CCCEEEEHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCHHHCCCCCCC FELGMASIEASHTFGKASVFVDLGFGKRAGEFSYNETTDKDINAKFLIKQLFFTYQITDE HHHHHEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEEECCC FKVVAGSFGTHIGYEVLDAVDNKNYSMSYAFSYGPFFNTGVKAQYTAGKFTAMLGITNPT EEEEECCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEECCCEEEEEEECCCCH DFKSAMDAGSSQKTYIGQVGYIGETGSAYLNFTSGSTNPTPGSLIPVSNENKTQFDLTAS HHHHHHCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCEEECCCCCCEEEEEEEC KTISDSFGLGLNATYAKTKHDFDSTLDGEWFSLVGYANYSFSPSLLLAYRMEYFDAKDAA CCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEHHHHHCCCCCC PSLGTLTGSSVFANTISLNYKVGKLTIIPELRYDAASEDIFLDKDGAPTGGSFFGLIATT CCCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCEEEECCCCCCCCCEEEEEEEE YSF ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA