Click here to switch to the map view.

The map label for this gene is ctaA

Identifier: 146302634

GI number: 146302634

Start: 5930130

End: 5931155

Strand: Direct

Name: ctaA

Synonym: Fjoh_4907

Alternate gene names: 146302634

Gene position: 5930130-5931155 (Clockwise)

Preceding gene: 146302633

Following gene: 146302644

Centisome position: 97.27

GC content: 33.92

Gene sequence:

>1026_bases
ATGAAAAAAGAGAATAAATCAGTAATCATTTGGTTACTATCAGGCTGTGTTTTATTGTTTTTAATGGTTGTTGTGGGAGG
AATTACCCGTTTAACCAATTCAGGTTTATCTATGACCGACTGGCATTTAGTAACCGACACCTTCCCTCCTCTAACAGATG
CAAAATGGCAGGCTGCATTTGATGAATATAAAAAGTTTCCTGAGTACCAAAAAATCAATATTCACAACGATTTTCAGCTT
TCAGATTATAAATTTATTTATTTCTGGGAATGGTTTCACCGTTTCATCGGCCGTATTATTGGATTGGTTTTCTTTGTTCC
TTTTGTTTACTTTTTAGCAAAAAAGAAATTAGATACTTCAACTATTAAAAAATGTATTGTTCTTTTGGCAATGGGAGCGT
TCCAAGGATTTTTAGGATGGTTTATGGTTCGCAGCGGATTAATCGATAATCCAGATGTAAGCCACTTTAGACTTTCTCTG
CACTTGACCTTCGCATTTATAACTTTTGCTTATACACTTTGGGTTGCACTTGATTTAATTTATCCTGAAAGAAATATCAA
CAAGATTTTACCTTTAAGAAATATTGCCCGTTATGCTTTAGCTGCTTTATTAATTCAGATTATTTACGGCGGATTTGTCG
CTGGACTAAATGCCGGATTAATTCACAATCACTGGCCTTTAATGAGCGATGGCGAGTTTATTCACGAATCGGTTTTTATT
GAGCAGTCGAGCTTGATTAAAAATTTAATTGAAGGAAAAAGCGGTGTTCAGTTTGTGCACAGAACTTTTGCTTATGCAGT
TGTTGCTGTTATTCTTTTTCTTTTCTTTAAAAGCAAAAAATATACGCTTACAAGAACGCAGTCAAATGGAATCAATACTT
TAGTTGTTTTTGTTTTTATTCAATTCTTACTTGGCGTATTTACATTATTATACAGCGTTCCTTTGGCTTTAGGATTAATT
CACCAGATTATGGCATTTTTCCTTTTGAGTGCCATGACGTATACTTTACACCGATTAAGCAAATAA

Upstream 100 bases:

>100_bases
TGATATTCCAAATGAATATCAAGCTGCTTATGATTTTGTGATTAAAAGAGCAGCGAAATTAGGCTTAAAAAAAGTTGAGA
AATAAGTAGTATTTAATAAA

Downstream 100 bases:

>100_bases
ATCGAAATATATTATAACAAAAAAGCTGTCTCAAAAGGACAGCTTTTTTTGTAAGCTTCAGAGAAGCGAAATATTTATAG
CAAAGGATAAATGTTTACAA

Product: cytochrome oxidase assembly

Products: NA

Alternate protein names: HAS; Cytochrome aa3-controlling protein

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKKENKSVIIWLLSGCVLLFLMVVVGGITRLTNSGLSMTDWHLVTDTFPPLTDAKWQAAFDEYKKFPEYQKINIHNDFQL
SDYKFIYFWEWFHRFIGRIIGLVFFVPFVYFLAKKKLDTSTIKKCIVLLAMGAFQGFLGWFMVRSGLIDNPDVSHFRLSL
HLTFAFITFAYTLWVALDLIYPERNINKILPLRNIARYALAALLIQIIYGGFVAGLNAGLIHNHWPLMSDGEFIHESVFI
EQSSLIKNLIEGKSGVQFVHRTFAYAVVAVILFLFFKSKKYTLTRTQSNGINTLVVFVFIQFLLGVFTLLYSVPLALGLI
HQIMAFFLLSAMTYTLHRLSK

Sequences:

>Translated_341_residues
MKKENKSVIIWLLSGCVLLFLMVVVGGITRLTNSGLSMTDWHLVTDTFPPLTDAKWQAAFDEYKKFPEYQKINIHNDFQL
SDYKFIYFWEWFHRFIGRIIGLVFFVPFVYFLAKKKLDTSTIKKCIVLLAMGAFQGFLGWFMVRSGLIDNPDVSHFRLSL
HLTFAFITFAYTLWVALDLIYPERNINKILPLRNIARYALAALLIQIIYGGFVAGLNAGLIHNHWPLMSDGEFIHESVFI
EQSSLIKNLIEGKSGVQFVHRTFAYAVVAVILFLFFKSKKYTLTRTQSNGINTLVVFVFIQFLLGVFTLLYSVPLALGLI
HQIMAFFLLSAMTYTLHRLSK
>Mature_341_residues
MKKENKSVIIWLLSGCVLLFLMVVVGGITRLTNSGLSMTDWHLVTDTFPPLTDAKWQAAFDEYKKFPEYQKINIHNDFQL
SDYKFIYFWEWFHRFIGRIIGLVFFVPFVYFLAKKKLDTSTIKKCIVLLAMGAFQGFLGWFMVRSGLIDNPDVSHFRLSL
HLTFAFITFAYTLWVALDLIYPERNINKILPLRNIARYALAALLIQIIYGGFVAGLNAGLIHNHWPLMSDGEFIHESVFI
EQSSLIKNLIEGKSGVQFVHRTFAYAVVAVILFLFFKSKKYTLTRTQSNGINTLVVFVFIQFLLGVFTLLYSVPLALGLI
HQIMAFFLLSAMTYTLHRLSK

Specific function: Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX15/CtaA family. Type 2 subfamily

Homologues:

Organism=Homo sapiens, GI17921985, Length=349, Percent_Identity=35.8166189111748, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI17921987, Length=309, Percent_Identity=36.2459546925566, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17536069, Length=349, Percent_Identity=34.6704871060172, Blast_Score=215, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6320989, Length=363, Percent_Identity=36.9146005509642, Blast_Score=214, Evalue=1e-56,
Organism=Drosophila melanogaster, GI19922860, Length=339, Percent_Identity=34.8082595870207, Blast_Score=199, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CTAA_FLAJ1 (A5FA69)

Other databases:

- EMBL:   CP000685
- RefSeq:   YP_001197225.1
- STRING:   A5FA69
- GeneID:   5094177
- GenomeReviews:   CP000685_GR
- KEGG:   fjo:Fjoh_4907
- eggNOG:   COG1612
- HOGENOM:   HBG628966
- OMA:   GLSIVEW
- ProtClustDB:   CLSK2788209
- BioCyc:   FJOH376686:FJOH_4907-MONOMER
- HAMAP:   MF_01665
- InterPro:   IPR003780

Pfam domain/function: PF02628 COX15-CtaA

EC number: NA

Molecular weight: Translated: 39260; Mature: 39260

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: BINDING 321-321

Signals:

None

Transmembrane regions:

HASH(0x1361031c)-; HASH(0x13147760)-; HASH(0x13bfb164)-; HASH(0x13c23b70)-; HASH(0x13390e68)-; HASH(0x13c33e0c)-; HASH(0x13c1c858)-; HASH(0x1089ac7c)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKENKSVIIWLLSGCVLLFLMVVVGGITRLTNSGLSMTDWHLVTDTFPPLTDAKWQAAF
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHH
DEYKKFPEYQKINIHNDFQLSDYKFIYFWEWFHRFIGRIIGLVFFVPFVYFLAKKKLDTS
HHHHCCCCCEEECCCCCCEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TIKKCIVLLAMGAFQGFLGWFMVRSGLIDNPDVSHFRLSLHLTFAFITFAYTLWVALDLI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
YPERNINKILPLRNIARYALAALLIQIIYGGFVAGLNAGLIHNHWPLMSDGEFIHESVFI
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHH
EQSSLIKNLIEGKSGVQFVHRTFAYAVVAVILFLFFKSKKYTLTRTQSNGINTLVVFVFI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH
QFLLGVFTLLYSVPLALGLIHQIMAFFLLSAMTYTLHRLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MKKENKSVIIWLLSGCVLLFLMVVVGGITRLTNSGLSMTDWHLVTDTFPPLTDAKWQAAF
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCHHHHHH
DEYKKFPEYQKINIHNDFQLSDYKFIYFWEWFHRFIGRIIGLVFFVPFVYFLAKKKLDTS
HHHHCCCCCEEECCCCCCEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
TIKKCIVLLAMGAFQGFLGWFMVRSGLIDNPDVSHFRLSLHLTFAFITFAYTLWVALDLI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
YPERNINKILPLRNIARYALAALLIQIIYGGFVAGLNAGLIHNHWPLMSDGEFIHESVFI
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHH
EQSSLIKNLIEGKSGVQFVHRTFAYAVVAVILFLFFKSKKYTLTRTQSNGINTLVVFVFI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH
QFLLGVFTLLYSVPLALGLIHQIMAFFLLSAMTYTLHRLSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA