| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302603
Identifier: 146302603
GI number: 146302603
Start: 5897543
End: 5897992
Strand: Reverse
Name: 146302603
Synonym: Fjoh_4876
Alternate gene names: NA
Gene position: 5897992-5897543 (Counterclockwise)
Preceding gene: 146302604
Following gene: 146302602
Centisome position: 96.74
GC content: 36.44
Gene sequence:
>450_bases ATGTATAATTGTTTTGATATAGCCAAATATTTTATTGAGCTGGCGGAAGAAGAAGGTCAGGGACTTGACCCAATGAAACT GCTCAAGCTTACTTACATTTCGCACGGCTGGCATTTAGGAATTACCGGAAAACCTCTTTTCGATAATGAAGTGCAGGCCT GGAAATACGGTTCGGTTATTCCTGATTTGTATTACGAAATACGAATGTTTGGAAAAGATCCTGTTGATCCGTTTTTGATT AATATTTCGGCTAAAACTCCATTGAAACAGGAAGACAAAGAGTTTCTAAAAAAAATCTGGAATAATTATAAAGGTTTATC AGGATTACAGCTTTCGGCTTTAACGCATGAAGAGGGAAGTCCGTGGTCGCAGACTTGGGACGGAACGCACAATGTAATTA TTGGCAATGATATTATTAAAGAATATTATAAGGAAAAACTAGATAGTTAA
Upstream 100 bases:
>100_bases AAAAAGCTTCCTATTAAATTTTCTTAATATAACTTTTACAAATAGTGGATTTCATCTCCTTTTTCTTAGTTTTGTTAAAA GAGAAATTAAAAGACAGCAA
Downstream 100 bases:
>100_bases ATGGAAAAAACACTGGCAGAAAAATTACCCGAAAGTGCTTTAGGAAACGATATTATTAATATTCCGAAAGATGTTACCAA AGAAGCCGAAAAGGAAAATC
Product: phage-associated protein
Products: NA
Alternate protein names: Prophage Protein; Phage-Associated Protein-Like Protein; Prophage Ps3 Protein; Phage-Associated Protein-Like; CPW-WPC Domain Protein
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MYNCFDIAKYFIELAEEEGQGLDPMKLLKLTYISHGWHLGITGKPLFDNEVQAWKYGSVIPDLYYEIRMFGKDPVDPFLI NISAKTPLKQEDKEFLKKIWNNYKGLSGLQLSALTHEEGSPWSQTWDGTHNVIIGNDIIKEYYKEKLDS
Sequences:
>Translated_149_residues MYNCFDIAKYFIELAEEEGQGLDPMKLLKLTYISHGWHLGITGKPLFDNEVQAWKYGSVIPDLYYEIRMFGKDPVDPFLI NISAKTPLKQEDKEFLKKIWNNYKGLSGLQLSALTHEEGSPWSQTWDGTHNVIIGNDIIKEYYKEKLDS >Mature_149_residues MYNCFDIAKYFIELAEEEGQGLDPMKLLKLTYISHGWHLGITGKPLFDNEVQAWKYGSVIPDLYYEIRMFGKDPVDPFLI NISAKTPLKQEDKEFLKKIWNNYKGLSGLQLSALTHEEGSPWSQTWDGTHNVIIGNDIIKEYYKEKLDS
Specific function: Unknown
COG id: COG3600
COG function: function code S; Uncharacterized phage-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17266; Mature: 17266
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNCFDIAKYFIELAEEEGQGLDPMKLLKLTYISHGWHLGITGKPLFDNEVQAWKYGSVI CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEECCCCC PDLYYEIRMFGKDPVDPFLINISAKTPLKQEDKEFLKKIWNNYKGLSGLQLSALTHEEGS HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC PWSQTWDGTHNVIIGNDIIKEYYKEKLDS CCCCCCCCCCCEEECHHHHHHHHHHHCCC >Mature Secondary Structure MYNCFDIAKYFIELAEEEGQGLDPMKLLKLTYISHGWHLGITGKPLFDNEVQAWKYGSVI CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEECCCCC PDLYYEIRMFGKDPVDPFLINISAKTPLKQEDKEFLKKIWNNYKGLSGLQLSALTHEEGS HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC PWSQTWDGTHNVIIGNDIIKEYYKEKLDS CCCCCCCCCCCEEECHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA