Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302603

Identifier: 146302603

GI number: 146302603

Start: 5897543

End: 5897992

Strand: Reverse

Name: 146302603

Synonym: Fjoh_4876

Alternate gene names: NA

Gene position: 5897992-5897543 (Counterclockwise)

Preceding gene: 146302604

Following gene: 146302602

Centisome position: 96.74

GC content: 36.44

Gene sequence:

>450_bases
ATGTATAATTGTTTTGATATAGCCAAATATTTTATTGAGCTGGCGGAAGAAGAAGGTCAGGGACTTGACCCAATGAAACT
GCTCAAGCTTACTTACATTTCGCACGGCTGGCATTTAGGAATTACCGGAAAACCTCTTTTCGATAATGAAGTGCAGGCCT
GGAAATACGGTTCGGTTATTCCTGATTTGTATTACGAAATACGAATGTTTGGAAAAGATCCTGTTGATCCGTTTTTGATT
AATATTTCGGCTAAAACTCCATTGAAACAGGAAGACAAAGAGTTTCTAAAAAAAATCTGGAATAATTATAAAGGTTTATC
AGGATTACAGCTTTCGGCTTTAACGCATGAAGAGGGAAGTCCGTGGTCGCAGACTTGGGACGGAACGCACAATGTAATTA
TTGGCAATGATATTATTAAAGAATATTATAAGGAAAAACTAGATAGTTAA

Upstream 100 bases:

>100_bases
AAAAAGCTTCCTATTAAATTTTCTTAATATAACTTTTACAAATAGTGGATTTCATCTCCTTTTTCTTAGTTTTGTTAAAA
GAGAAATTAAAAGACAGCAA

Downstream 100 bases:

>100_bases
ATGGAAAAAACACTGGCAGAAAAATTACCCGAAAGTGCTTTAGGAAACGATATTATTAATATTCCGAAAGATGTTACCAA
AGAAGCCGAAAAGGAAAATC

Product: phage-associated protein

Products: NA

Alternate protein names: Prophage Protein; Phage-Associated Protein-Like Protein; Prophage Ps3 Protein; Phage-Associated Protein-Like; CPW-WPC Domain Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MYNCFDIAKYFIELAEEEGQGLDPMKLLKLTYISHGWHLGITGKPLFDNEVQAWKYGSVIPDLYYEIRMFGKDPVDPFLI
NISAKTPLKQEDKEFLKKIWNNYKGLSGLQLSALTHEEGSPWSQTWDGTHNVIIGNDIIKEYYKEKLDS

Sequences:

>Translated_149_residues
MYNCFDIAKYFIELAEEEGQGLDPMKLLKLTYISHGWHLGITGKPLFDNEVQAWKYGSVIPDLYYEIRMFGKDPVDPFLI
NISAKTPLKQEDKEFLKKIWNNYKGLSGLQLSALTHEEGSPWSQTWDGTHNVIIGNDIIKEYYKEKLDS
>Mature_149_residues
MYNCFDIAKYFIELAEEEGQGLDPMKLLKLTYISHGWHLGITGKPLFDNEVQAWKYGSVIPDLYYEIRMFGKDPVDPFLI
NISAKTPLKQEDKEFLKKIWNNYKGLSGLQLSALTHEEGSPWSQTWDGTHNVIIGNDIIKEYYKEKLDS

Specific function: Unknown

COG id: COG3600

COG function: function code S; Uncharacterized phage-associated protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17266; Mature: 17266

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNCFDIAKYFIELAEEEGQGLDPMKLLKLTYISHGWHLGITGKPLFDNEVQAWKYGSVI
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEECCCCC
PDLYYEIRMFGKDPVDPFLINISAKTPLKQEDKEFLKKIWNNYKGLSGLQLSALTHEEGS
HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
PWSQTWDGTHNVIIGNDIIKEYYKEKLDS
CCCCCCCCCCCEEECHHHHHHHHHHHCCC
>Mature Secondary Structure
MYNCFDIAKYFIELAEEEGQGLDPMKLLKLTYISHGWHLGITGKPLFDNEVQAWKYGSVI
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEECCCCC
PDLYYEIRMFGKDPVDPFLINISAKTPLKQEDKEFLKKIWNNYKGLSGLQLSALTHEEGS
HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
PWSQTWDGTHNVIIGNDIIKEYYKEKLDS
CCCCCCCCCCCEEECHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA