Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302593

Identifier: 146302593

GI number: 146302593

Start: 5888434

End: 5889051

Strand: Reverse

Name: 146302593

Synonym: Fjoh_4866

Alternate gene names: NA

Gene position: 5889051-5888434 (Counterclockwise)

Preceding gene: 146302594

Following gene: 146302592

Centisome position: 96.59

GC content: 27.02

Gene sequence:

>618_bases
ATGAAAAATTATTTAATTCTTATCATTTTGTTGTTTTCAATGAAAATTGCTGCACAAAATGATGCTAAGGCTAAATTCCA
GAAAAATAAATACGAATTGGCCGTTTCTTATTACAAAAAATCAGATTTTGTAAATGCTTTAGACCAATTTTCAATCGCAT
CTAAAATTAGACCTGAAAATGAAATAGGTCAGGAATCAATCAAAAAAGTAGATACCTTAAAAGAAATTTTAAGAAAAGAA
ATTTTAGAGAAAGTAAACGGAACCTGGCTCATGACTGGCGATAAACCAAGCTGGACTGTAAATGCGAATGATAATTTTAA
GAACAAATTAGTTGACGAATTAGTAGAAATTGGTAACAATAAAATTTTGTTTTATGAAGTAGATCGTAAAACAAAAGCAA
AAAAACTTATAAAAACTGAAGATTTGGTGTATTACAATATGGATAAATCAGACGCTTTATTTTCAGCATTTATTTTATCA
GATGGTACAATTTGGAACTGTACAGTTGATGATAAATCAAAAGTTCTTCATGTAATTAATATTGCAAAAAAAGGAGAAAA
CGGAGTTGAAAAAATTACAGAAAACAACGATGAGATATTTTATAAAAAAGCTATTTAA

Upstream 100 bases:

>100_bases
AAAGATTTGGCTTTTTTTGATACTTTATTACGGGAAACCGTATTTGTAAGAAATTTTTATTCACTACGTTTGCAAAAAAT
AAAAAAACACCCCTAAACCA

Downstream 100 bases:

>100_bases
GCTTTATTGTAAATAAATAAACAAAAAAGGAATCTAAAATTAGATTCCTTTTTTGTTTTTGAATCATATAAAGTATTTTT
TAGTCCATAAATTTGTAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKNYLILIILLFSMKIAAQNDAKAKFQKNKYELAVSYYKKSDFVNALDQFSIASKIRPENEIGQESIKKVDTLKEILRKE
ILEKVNGTWLMTGDKPSWTVNANDNFKNKLVDELVEIGNNKILFYEVDRKTKAKKLIKTEDLVYYNMDKSDALFSAFILS
DGTIWNCTVDDKSKVLHVINIAKKGENGVEKITENNDEIFYKKAI

Sequences:

>Translated_205_residues
MKNYLILIILLFSMKIAAQNDAKAKFQKNKYELAVSYYKKSDFVNALDQFSIASKIRPENEIGQESIKKVDTLKEILRKE
ILEKVNGTWLMTGDKPSWTVNANDNFKNKLVDELVEIGNNKILFYEVDRKTKAKKLIKTEDLVYYNMDKSDALFSAFILS
DGTIWNCTVDDKSKVLHVINIAKKGENGVEKITENNDEIFYKKAI
>Mature_205_residues
MKNYLILIILLFSMKIAAQNDAKAKFQKNKYELAVSYYKKSDFVNALDQFSIASKIRPENEIGQESIKKVDTLKEILRKE
ILEKVNGTWLMTGDKPSWTVNANDNFKNKLVDELVEIGNNKILFYEVDRKTKAKKLIKTEDLVYYNMDKSDALFSAFILS
DGTIWNCTVDDKSKVLHVINIAKKGENGVEKITENNDEIFYKKAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23618; Mature: 23618

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS50005 TPR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNYLILIILLFSMKIAAQNDAKAKFQKNKYELAVSYYKKSDFVNALDQFSIASKIRPEN
CCCHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCH
EIGQESIKKVDTLKEILRKEILEKVNGTWLMTGDKPSWTVNANDNFKNKLVDELVEIGNN
HCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHCCC
KILFYEVDRKTKAKKLIKTEDLVYYNMDKSDALFSAFILSDGTIWNCTVDDKSKVLHVIN
EEEEEECCCCHHHHHHHCCCCEEEEECCCCHHHHHHHEECCCCEEEEEECCCHHEEEEEH
IAKKGENGVEKITENNDEIFYKKAI
HHHCCCCHHHHHHCCCCEEEEEECC
>Mature Secondary Structure
MKNYLILIILLFSMKIAAQNDAKAKFQKNKYELAVSYYKKSDFVNALDQFSIASKIRPEN
CCCHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCH
EIGQESIKKVDTLKEILRKEILEKVNGTWLMTGDKPSWTVNANDNFKNKLVDELVEIGNN
HCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHCCC
KILFYEVDRKTKAKKLIKTEDLVYYNMDKSDALFSAFILSDGTIWNCTVDDKSKVLHVIN
EEEEEECCCCHHHHHHHCCCCEEEEECCCCHHHHHHHEECCCCEEEEEECCCHHEEEEEH
IAKKGENGVEKITENNDEIFYKKAI
HHHCCCCHHHHHHCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA