| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302593
Identifier: 146302593
GI number: 146302593
Start: 5888434
End: 5889051
Strand: Reverse
Name: 146302593
Synonym: Fjoh_4866
Alternate gene names: NA
Gene position: 5889051-5888434 (Counterclockwise)
Preceding gene: 146302594
Following gene: 146302592
Centisome position: 96.59
GC content: 27.02
Gene sequence:
>618_bases ATGAAAAATTATTTAATTCTTATCATTTTGTTGTTTTCAATGAAAATTGCTGCACAAAATGATGCTAAGGCTAAATTCCA GAAAAATAAATACGAATTGGCCGTTTCTTATTACAAAAAATCAGATTTTGTAAATGCTTTAGACCAATTTTCAATCGCAT CTAAAATTAGACCTGAAAATGAAATAGGTCAGGAATCAATCAAAAAAGTAGATACCTTAAAAGAAATTTTAAGAAAAGAA ATTTTAGAGAAAGTAAACGGAACCTGGCTCATGACTGGCGATAAACCAAGCTGGACTGTAAATGCGAATGATAATTTTAA GAACAAATTAGTTGACGAATTAGTAGAAATTGGTAACAATAAAATTTTGTTTTATGAAGTAGATCGTAAAACAAAAGCAA AAAAACTTATAAAAACTGAAGATTTGGTGTATTACAATATGGATAAATCAGACGCTTTATTTTCAGCATTTATTTTATCA GATGGTACAATTTGGAACTGTACAGTTGATGATAAATCAAAAGTTCTTCATGTAATTAATATTGCAAAAAAAGGAGAAAA CGGAGTTGAAAAAATTACAGAAAACAACGATGAGATATTTTATAAAAAAGCTATTTAA
Upstream 100 bases:
>100_bases AAAGATTTGGCTTTTTTTGATACTTTATTACGGGAAACCGTATTTGTAAGAAATTTTTATTCACTACGTTTGCAAAAAAT AAAAAAACACCCCTAAACCA
Downstream 100 bases:
>100_bases GCTTTATTGTAAATAAATAAACAAAAAAGGAATCTAAAATTAGATTCCTTTTTTGTTTTTGAATCATATAAAGTATTTTT TAGTCCATAAATTTGTAATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MKNYLILIILLFSMKIAAQNDAKAKFQKNKYELAVSYYKKSDFVNALDQFSIASKIRPENEIGQESIKKVDTLKEILRKE ILEKVNGTWLMTGDKPSWTVNANDNFKNKLVDELVEIGNNKILFYEVDRKTKAKKLIKTEDLVYYNMDKSDALFSAFILS DGTIWNCTVDDKSKVLHVINIAKKGENGVEKITENNDEIFYKKAI
Sequences:
>Translated_205_residues MKNYLILIILLFSMKIAAQNDAKAKFQKNKYELAVSYYKKSDFVNALDQFSIASKIRPENEIGQESIKKVDTLKEILRKE ILEKVNGTWLMTGDKPSWTVNANDNFKNKLVDELVEIGNNKILFYEVDRKTKAKKLIKTEDLVYYNMDKSDALFSAFILS DGTIWNCTVDDKSKVLHVINIAKKGENGVEKITENNDEIFYKKAI >Mature_205_residues MKNYLILIILLFSMKIAAQNDAKAKFQKNKYELAVSYYKKSDFVNALDQFSIASKIRPENEIGQESIKKVDTLKEILRKE ILEKVNGTWLMTGDKPSWTVNANDNFKNKLVDELVEIGNNKILFYEVDRKTKAKKLIKTEDLVYYNMDKSDALFSAFILS DGTIWNCTVDDKSKVLHVINIAKKGENGVEKITENNDEIFYKKAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23618; Mature: 23618
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: PS50005 TPR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNYLILIILLFSMKIAAQNDAKAKFQKNKYELAVSYYKKSDFVNALDQFSIASKIRPEN CCCHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCH EIGQESIKKVDTLKEILRKEILEKVNGTWLMTGDKPSWTVNANDNFKNKLVDELVEIGNN HCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHCCC KILFYEVDRKTKAKKLIKTEDLVYYNMDKSDALFSAFILSDGTIWNCTVDDKSKVLHVIN EEEEEECCCCHHHHHHHCCCCEEEEECCCCHHHHHHHEECCCCEEEEEECCCHHEEEEEH IAKKGENGVEKITENNDEIFYKKAI HHHCCCCHHHHHHCCCCEEEEEECC >Mature Secondary Structure MKNYLILIILLFSMKIAAQNDAKAKFQKNKYELAVSYYKKSDFVNALDQFSIASKIRPEN CCCHHHHHHHHHHHHHHCCCCCHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCH EIGQESIKKVDTLKEILRKEILEKVNGTWLMTGDKPSWTVNANDNFKNKLVDELVEIGNN HCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCCCHHHHHHHHHHHHCCC KILFYEVDRKTKAKKLIKTEDLVYYNMDKSDALFSAFILSDGTIWNCTVDDKSKVLHVIN EEEEEECCCCHHHHHHHCCCCEEEEECCCCHHHHHHHEECCCCEEEEEECCCHHEEEEEH IAKKGENGVEKITENNDEIFYKKAI HHHCCCCHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA