Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302582

Identifier: 146302582

GI number: 146302582

Start: 5874757

End: 5875167

Strand: Direct

Name: 146302582

Synonym: Fjoh_4855

Alternate gene names: NA

Gene position: 5874757-5875167 (Clockwise)

Preceding gene: 146302581

Following gene: 146302583

Centisome position: 96.36

GC content: 35.28

Gene sequence:

>411_bases
ATGAAAAAAAACTACCTCATCTTACTGTTGCTTTTTATATTTTATTCCTGCGAAAAAGCATCTGCTCCTCTTCCAGCCCA
GATAAATACTTTTTACCAATCAGCAATTACAGCAGATGACCGTAAAACGATTACGCCGGAAGAAGCCAAAACGTATCATG
TTAATAACACTTACAAGTACGAATACCGAACCGGAAATCCCGGAAATTATAAATACAATTATGATGTAAAAGGAATAAAC
ATCAATGGCGATTCGGTTTTTGGCAATATAAATGTTCAGGGAAAATACGGCGCCGGAATTTTAATTGGCGACACCGTTGC
CGAGATTGAAATTAATACCGAATGGATTTCATACGGAAAATTAAAAGCGCTCGATAAAAAAGGAAACGAATACAATTTAA
TCGTAAAATAA

Upstream 100 bases:

>100_bases
GGTTTTGGTATTTTAGGAAATATCTTTTTATCTAGTAAAATTGATGAAGCAATAAAACAGTAAAAAAGATTTTAAAACTA
ACCAAATACCACAAGCGCCT

Downstream 100 bases:

>100_bases
AAACGATCTCATGAAATACACTTTACTCTTACTTTTTGTTTTTACCGTATCTTTTACTCCGCCGCCAGCCAGCGTATTTA
TCTGCGGATCGACCGGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKKNYLILLLLFIFYSCEKASAPLPAQINTFYQSAITADDRKTITPEEAKTYHVNNTYKYEYRTGNPGNYKYNYDVKGIN
INGDSVFGNINVQGKYGAGILIGDTVAEIEINTEWISYGKLKALDKKGNEYNLIVK

Sequences:

>Translated_136_residues
MKKNYLILLLLFIFYSCEKASAPLPAQINTFYQSAITADDRKTITPEEAKTYHVNNTYKYEYRTGNPGNYKYNYDVKGIN
INGDSVFGNINVQGKYGAGILIGDTVAEIEINTEWISYGKLKALDKKGNEYNLIVK
>Mature_136_residues
MKKNYLILLLLFIFYSCEKASAPLPAQINTFYQSAITADDRKTITPEEAKTYHVNNTYKYEYRTGNPGNYKYNYDVKGIN
INGDSVFGNINVQGKYGAGILIGDTVAEIEINTEWISYGKLKALDKKGNEYNLIVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15410; Mature: 15410

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNYLILLLLFIFYSCEKASAPLPAQINTFYQSAITADDRKTITPEEAKTYHVNNTYKY
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEE
EYRTGNPGNYKYNYDVKGININGDSVFGNINVQGKYGAGILIGDTVAEIEINTEWISYGK
EEECCCCCCEEEEEEEEEEEECCCEEEEEEEECCCCCCEEEECCEEEEEEEECEEECCCE
LKALDKKGNEYNLIVK
EEEECCCCCEEEEEEC
>Mature Secondary Structure
MKKNYLILLLLFIFYSCEKASAPLPAQINTFYQSAITADDRKTITPEEAKTYHVNNTYKY
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEE
EYRTGNPGNYKYNYDVKGININGDSVFGNINVQGKYGAGILIGDTVAEIEINTEWISYGK
EEECCCCCCEEEEEEEEEEEECCCEEEEEEEECCCCCCEEEECCEEEEEEEECEEECCCE
LKALDKKGNEYNLIVK
EEEECCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA