| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302573
Identifier: 146302573
GI number: 146302573
Start: 5866931
End: 5867599
Strand: Direct
Name: 146302573
Synonym: Fjoh_4846
Alternate gene names: NA
Gene position: 5866931-5867599 (Clockwise)
Preceding gene: 146302572
Following gene: 146302574
Centisome position: 96.23
GC content: 30.79
Gene sequence:
>669_bases ATGTTTAAAAAAGTAATAATTGCTGAAGATATCGACGCAATGAATTTAGGAATTCAACAAGTTTTAAAAGATTTAAATAT TGTCAATTTTCAACATTCCAGATTTTGCGATGATGCATTTCTAAAAATACGCGCTGCAATTCAGCAAAATGAACCTTATG ATTTATTAATCAGCGATCTTTCTTTTAAAACAGATCATCGCAAATCTGACATTACCAGTGGAGACGAACTGGTTCAAAAA GTTCGAGAACTGCAGTCGGATATTAAAATCATTGCTTACTCGGTAGAAGATAAAAGTTACCGCATTAAATCACTTTTTGA AGATGCCGAAATAGATGCTTTTGTATTAAAAGGTTTAAATAGTATCGAAGAGTTAAAAAAAGCGATTAGTATTATTTCAA CTTCCGATCAAAAATTTATTTCTCCGGAAGTTGCTTCGGCATTACTGGAAAAAAACAATTTCGAAATTGACGATGTCGAT ATTAAAATTCTAAAATATTTATCAGCCGGAACGTCGCAGGATGAAATTATCGAAATTTTTAAAAACAGCGATGTAAAACC AAACAGTAAAAGTGCCATGGAAAAAAGATTAGCAAAACTCAAAGACTTTTTTAAAGCCAATAATACCGTTCATTTGGTTT CGATTACAAAAGATATGGGAATTATTTAA
Upstream 100 bases:
>100_bases TATGGAAATCCGTATTCTAGCCATAAAGGGAACTATTACTTTTGAAACTGAACCAGATAAAGGTTTTAAAGTAAAAATAA CAATGCCTAAATAAAAGCCT
Downstream 100 bases:
>100_bases ACTCCCAATTACTTCATTTTCAAAGCTCCTTCGGGAGCTTTTTTTATTCCTGAAATTTAAAATTTTCAGATTATGGTTTT CCGTAATATACTGGTTTTGA
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator Receiver Protein; Response Regulator GacA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MFKKVIIAEDIDAMNLGIQQVLKDLNIVNFQHSRFCDDAFLKIRAAIQQNEPYDLLISDLSFKTDHRKSDITSGDELVQK VRELQSDIKIIAYSVEDKSYRIKSLFEDAEIDAFVLKGLNSIEELKKAISIISTSDQKFISPEVASALLEKNNFEIDDVD IKILKYLSAGTSQDEIIEIFKNSDVKPNSKSAMEKRLAKLKDFFKANNTVHLVSITKDMGII
Sequences:
>Translated_222_residues MFKKVIIAEDIDAMNLGIQQVLKDLNIVNFQHSRFCDDAFLKIRAAIQQNEPYDLLISDLSFKTDHRKSDITSGDELVQK VRELQSDIKIIAYSVEDKSYRIKSLFEDAEIDAFVLKGLNSIEELKKAISIISTSDQKFISPEVASALLEKNNFEIDDVD IKILKYLSAGTSQDEIIEIFKNSDVKPNSKSAMEKRLAKLKDFFKANNTVHLVSITKDMGII >Mature_222_residues MFKKVIIAEDIDAMNLGIQQVLKDLNIVNFQHSRFCDDAFLKIRAAIQQNEPYDLLISDLSFKTDHRKSDITSGDELVQK VRELQSDIKIIAYSVEDKSYRIKSLFEDAEIDAFVLKGLNSIEELKKAISIISTSDQKFISPEVASALLEKNNFEIDDVD IKILKYLSAGTSQDEIIEIFKNSDVKPNSKSAMEKRLAKLKDFFKANNTVHLVSITKDMGII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25194; Mature: 25194
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKVIIAEDIDAMNLGIQQVLKDLNIVNFQHSRFCDDAFLKIRAAIQQNEPYDLLISDL CCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCC SFKTDHRKSDITSGDELVQKVRELQSDIKIIAYSVEDKSYRIKSLFEDAEIDAFVLKGLN CCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHCCH SIEELKKAISIISTSDQKFISPEVASALLEKNNFEIDDVDIKILKYLSAGTSQDEIIEIF HHHHHHHHHHHHCCCCCHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH KNSDVKPNSKSAMEKRLAKLKDFFKANNTVHLVSITKDMGII HCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC >Mature Secondary Structure MFKKVIIAEDIDAMNLGIQQVLKDLNIVNFQHSRFCDDAFLKIRAAIQQNEPYDLLISDL CCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCC SFKTDHRKSDITSGDELVQKVRELQSDIKIIAYSVEDKSYRIKSLFEDAEIDAFVLKGLN CCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHCCH SIEELKKAISIISTSDQKFISPEVASALLEKNNFEIDDVDIKILKYLSAGTSQDEIIEIF HHHHHHHHHHHHCCCCCHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHH KNSDVKPNSKSAMEKRLAKLKDFFKANNTVHLVSITKDMGII HCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA